RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
H3F3B-201ENST00000254810 ARXQ96QS3 562 aa17.15■□□□□ 0.34
H3F3B-201ENST00000254810 ZCCHC11Q5TAX3 1644 aaKnown RBP17.14■□□□□ 0.34
H3F3B-201ENST00000254810 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
H3F3B-201ENST00000254810 RUNDC1Q96C34 613 aa17.14■□□□□ 0.33
H3F3B-201ENST00000254810 MORC1Q86VD1 984 aa17.13■□□□□ 0.33
H3F3B-201ENST00000254810 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
H3F3B-201ENST00000254810 VWDEQ8N2E2 1590 aa17.12■□□□□ 0.33
H3F3B-201ENST00000254810 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
H3F3B-201ENST00000254810 MYOM2P54296 1465 aa17.12■□□□□ 0.33
H3F3B-201ENST00000254810 KIF3BO15066 747 aa17.12■□□□□ 0.33
H3F3B-201ENST00000254810 RTEL1-TNFRSF6BF6WH68 1400 aa17.11■□□□□ 0.33
H3F3B-201ENST00000254810 MTHFSP49914 203 aa17.1■□□□□ 0.33
H3F3B-201ENST00000254810 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
H3F3B-201ENST00000254810 MROH1Q8NDA8 1641 aa17.09■□□□□ 0.33
H3F3B-201ENST00000254810 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
H3F3B-201ENST00000254810 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
H3F3B-201ENST00000254810 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.322e-12■□□□□ 10.2
H3F3B-201ENST00000254810 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
H3F3B-201ENST00000254810 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.32
H3F3B-201ENST00000254810 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
H3F3B-201ENST00000254810 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
H3F3B-201ENST00000254810 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
H3F3B-201ENST00000254810 RWDD1Q9H446 243 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-201ENST00000254810 ZNF518AQ6AHZ1 1483 aa17.07■□□□□ 0.32
H3F3B-201ENST00000254810 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
H3F3B-201ENST00000254810 NRXN1Q9ULB1 1477 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 NOS1P29475 1434 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 KANK1Q14678 1352 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 NEURL4Q96JN8 1562 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
H3F3B-201ENST00000254810 MCM4P33991 863 aa17.05■□□□□ 0.32
H3F3B-201ENST00000254810 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
H3F3B-201ENST00000254810 ZMYM3Q14202 1370 aa17.05■□□□□ 0.32
H3F3B-201ENST00000254810 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
H3F3B-201ENST00000254810 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
H3F3B-201ENST00000254810 KIF1BO60333 1816 aa17.04■□□□□ 0.32
H3F3B-201ENST00000254810 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
H3F3B-201ENST00000254810 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
H3F3B-201ENST00000254810 UBE2Q2Q8WVN8 375 aa17.04■□□□□ 0.32
H3F3B-201ENST00000254810 ZC3H13Q5T200 1668 aaKnown RBP17.03■□□□□ 0.32
H3F3B-201ENST00000254810 AAMPQ13685 434 aa17.03■□□□□ 0.32
H3F3B-201ENST00000254810 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
H3F3B-201ENST00000254810 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
H3F3B-201ENST00000254810 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
H3F3B-201ENST00000254810 SLC24A1O60721 1099 aa17.02■□□□□ 0.31
H3F3B-201ENST00000254810 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.31
H3F3B-201ENST00000254810 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
H3F3B-201ENST00000254810 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
H3F3B-201ENST00000254810 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
H3F3B-201ENST00000254810 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
H3F3B-201ENST00000254810 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
H3F3B-201ENST00000254810 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
H3F3B-201ENST00000254810 TRIM27P14373 513 aa17.01■□□□□ 0.31
H3F3B-201ENST00000254810 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
H3F3B-201ENST00000254810 GOLGA6L3A6NEY3 463 aa17■□□□□ 0.31
H3F3B-201ENST00000254810 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
H3F3B-201ENST00000254810 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
H3F3B-201ENST00000254810 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
H3F3B-201ENST00000254810 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
H3F3B-201ENST00000254810 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 CD109Q6YHK3 1445 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 ADGRB2O60241 1585 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 TRAK2O60296 914 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
H3F3B-201ENST00000254810 FANCAO15360 1455 aa16.97■□□□□ 0.31
H3F3B-201ENST00000254810 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
H3F3B-201ENST00000254810 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
H3F3B-201ENST00000254810 CHMP5Q9NZZ3 219 aa16.97■□□□□ 0.31
H3F3B-201ENST00000254810 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
H3F3B-201ENST00000254810 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
H3F3B-201ENST00000254810 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.31
H3F3B-201ENST00000254810 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
H3F3B-201ENST00000254810 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.31
H3F3B-201ENST00000254810 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.3
H3F3B-201ENST00000254810 CFAP65Q6ZU64 1925 aaKnown RBP16.95■□□□□ 0.3
H3F3B-201ENST00000254810 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
H3F3B-201ENST00000254810 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
H3F3B-201ENST00000254810 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
H3F3B-201ENST00000254810 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
H3F3B-201ENST00000254810 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
H3F3B-201ENST00000254810 TULP4Q9NRJ4 1543 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 DDIT3P35638 169 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 PPLO60437 1756 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 ATF7IPQ6VMQ6 1270 aa16.93■□□□□ 0.3
H3F3B-201ENST00000254810 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
H3F3B-201ENST00000254810 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
H3F3B-201ENST00000254810 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
H3F3B-201ENST00000254810 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
H3F3B-201ENST00000254810 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
H3F3B-201ENST00000254810 ZBTB40Q9NUA8 1239 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
H3F3B-201ENST00000254810 ANKRD36BQ8N2N9 1353 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms