RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 TULP4Q9NRJ4 1543 aa31.56■■■□□ 2.64
GDF1-201ENST00000247005 RIMBP3CA6NJZ7 1639 aa31.55■■■□□ 2.64
GDF1-201ENST00000247005 RIMBP3BA6NNM3 1639 aa31.55■■■□□ 2.64
GDF1-201ENST00000247005 RIMBP3Q9UFD9 1639 aa31.55■■■□□ 2.64
GDF1-201ENST00000247005 ARHGEF28Q8N1W1 1705 aaKnown RBP31.55■■■□□ 2.64
GDF1-201ENST00000247005 POLR3AO14802 1390 aaPredicted RBP31.54■■■□□ 2.64
GDF1-201ENST00000247005 PREX1Q8TCU6 1659 aa31.53■■■□□ 2.64
GDF1-201ENST00000247005 CGNL1Q0VF96 1302 aa31.52■■■□□ 2.64
GDF1-201ENST00000247005 SKAP1Q86WV1 359 aa31.51■■■□□ 2.64
GDF1-201ENST00000247005 MTHFSP49914 203 aa31.51■■■□□ 2.63
GDF1-201ENST00000247005 TRMT2AQ8IZ69 625 aaKnown RBP31.51■■■□□ 2.63
GDF1-201ENST00000247005 MLECQ14165 292 aa31.5■■■□□ 2.63
GDF1-201ENST00000247005 NEUROD2Q15784 382 aa31.5■■■□□ 2.63
GDF1-201ENST00000247005 SRPK2P78362 688 aaKnown RBP31.49■■■□□ 2.63
GDF1-201ENST00000247005 TMEM131LA2VDJ0 1609 aa31.49■■■□□ 2.63
GDF1-201ENST00000247005 DIP2BQ9P265 1576 aa31.49■■■□□ 2.63
GDF1-201ENST00000247005 MINK1Q8N4C8 1332 aaPredicted RBP31.49■■■□□ 2.63
GDF1-201ENST00000247005 STAG3Q9UJ98 1225 aa31.48■■■□□ 2.63
GDF1-201ENST00000247005 RRP7AQ9Y3A4 280 aaKnown RBP31.48■■■□□ 2.63
GDF1-201ENST00000247005 ZFYVE9O95405 1425 aa31.48■■■□□ 2.63
GDF1-201ENST00000247005 PRAM1Q96QH2 718 aa31.47■■■□□ 2.63
GDF1-201ENST00000247005 ANKRD36BQ8N2N9 1353 aa31.46■■■□□ 2.63
GDF1-201ENST00000247005 BCAR3O75815 825 aa31.44■■■□□ 2.62
GDF1-201ENST00000247005 POGKQ9P215 609 aa31.43■■■□□ 2.62
GDF1-201ENST00000247005 E9PSI1 815 aa31.42■■■□□ 2.62
GDF1-201ENST00000247005 WWC1Q8IX03 1113 aa31.42■■■□□ 2.62
GDF1-201ENST00000247005 PUS7Q96PZ0 661 aaKnown RBP31.42■■■□□ 2.62
GDF1-201ENST00000247005 ERICH6Q7L0X2 663 aa31.42■■■□□ 2.62
GDF1-201ENST00000247005 SHPRHQ149N8 1683 aa31.41■■■□□ 2.62
GDF1-201ENST00000247005 NKTRP30414 1462 aaKnown RBP31.4■■■□□ 2.62
GDF1-201ENST00000247005 A0A1W2PP64 1363 aa31.39■■■□□ 2.62
GDF1-201ENST00000247005 YTHDC2Q9H6S0 1430 aaKnown RBP31.39■■■□□ 2.61
GDF1-201ENST00000247005 PTPRMP28827 1452 aa31.38■■■□□ 2.61
GDF1-201ENST00000247005 TCP11L2Q8N4U5 519 aa31.38■■■□□ 2.61
GDF1-201ENST00000247005 GGNBP2Q9H3C7 697 aa31.38■■■□□ 2.61
GDF1-201ENST00000247005 TCERG1O14776 1098 aaKnown RBP31.37■■■□□ 2.61
GDF1-201ENST00000247005 RUNDC1Q96C34 613 aa31.37■■■□□ 2.61
GDF1-201ENST00000247005 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.36■■■□□ 2.61
GDF1-201ENST00000247005 USP32Q8NFA0 1604 aa31.35■■■□□ 2.61
GDF1-201ENST00000247005 CFAP53Q96M91 514 aa31.34■■■□□ 2.61
GDF1-201ENST00000247005 PDE4AP27815 886 aa31.31■■■□□ 2.6
GDF1-201ENST00000247005 ALKQ9UM73 1620 aa31.31■■■□□ 2.6
GDF1-201ENST00000247005 U2AF1L5P0DN76 240 aaPredicted RBP31.31■■■□□ 2.6
GDF1-201ENST00000247005 U2AF1Q01081 240 aaKnown RBP eCLIP31.31■■■□□ 2.6
GDF1-201ENST00000247005 NGEFQ8N5V2 710 aa31.31■■■□□ 2.6
GDF1-201ENST00000247005 CLTCQ00610 1675 aaKnown RBP31.31■■■□□ 2.6
GDF1-201ENST00000247005 WAPLQ7Z5K2 1190 aa31.3■■■□□ 2.6
GDF1-201ENST00000247005 CDK19Q9BWU1 502 aa31.3■■■□□ 2.6
GDF1-201ENST00000247005 PAK3O75914 559 aaPredicted RBP31.28■■■□□ 2.6
GDF1-201ENST00000247005 NSD2O96028 1365 aa31.28■■■□□ 2.6
GDF1-201ENST00000247005 ABCC11Q96J66 1382 aa31.28■■■□□ 2.6
GDF1-201ENST00000247005 KDM2BQ8NHM5 1336 aa31.28■■■□□ 2.6
GDF1-201ENST00000247005 ANP32AP39687 249 aaKnown RBP31.28■■■□□ 2.6
GDF1-201ENST00000247005 NPM2Q86SE8 214 aaKnown RBP31.28■■■□□ 2.6
GDF1-201ENST00000247005 FYB1O15117 783 aa31.27■■■□□ 2.6
GDF1-201ENST00000247005 CABP1Q9NZU7 370 aa31.26■■■□□ 2.59
GDF1-201ENST00000247005 TERF2IPQ9NYB0 399 aa31.25■■■□□ 2.59
GDF1-201ENST00000247005 ATAD2Q6PL18 1390 aa31.24■■■□□ 2.59
GDF1-201ENST00000247005 A2ML1A8K2U0 1454 aa31.24■■■□□ 2.59
GDF1-201ENST00000247005 IQSEC2Q5JU85 1478 aa31.24■■■□□ 2.59
GDF1-201ENST00000247005 AGLP35573 1532 aa31.24■■■□□ 2.59
GDF1-201ENST00000247005 BACH2Q9BYV9 841 aa31.24■■■□□ 2.59
GDF1-201ENST00000247005 NOP58Q9Y2X3 529 aaKnown RBP31.24■■■□□ 2.59
GDF1-201ENST00000247005 CD163L1Q9NR16 1453 aa31.23■■■□□ 2.59
GDF1-201ENST00000247005 PPP6R1Q9UPN7 881 aa31.23■■■□□ 2.59
GDF1-201ENST00000247005 NINLQ9Y2I6 1382 aa31.22■■■□□ 2.59
GDF1-201ENST00000247005 U2SURPO15042 1029 aaKnown RBP31.22■■■□□ 2.59
GDF1-201ENST00000247005 MS4A1P11836 297 aa31.22■■■□□ 2.59
GDF1-201ENST00000247005 PHF23Q9BUL5 403 aaPredicted RBP31.22■■■□□ 2.59
GDF1-201ENST00000247005 IPO9Q96P70 1041 aaKnown RBP31.21■■■□□ 2.59
GDF1-201ENST00000247005 RIMS2Q9UQ26 1411 aa31.21■■■□□ 2.59
GDF1-201ENST00000247005 REREQ9P2R6 1566 aa31.2■■■□□ 2.58
GDF1-201ENST00000247005 CENPQQ7L2Z9 268 aaPredicted RBP31.19■■■□□ 2.58
GDF1-201ENST00000247005 FRAT1Q92837 279 aaPredicted RBP31.18■■■□□ 2.58
GDF1-201ENST00000247005 PANK1Q8TE04 598 aa31.18■■■□□ 2.58
GDF1-201ENST00000247005 ARHGEF40Q8TER5 1519 aa31.17■■■□□ 2.58
GDF1-201ENST00000247005 FBLN1P23142 703 aa31.17■■■□□ 2.58
GDF1-201ENST00000247005 CANXP27824 592 aaKnown RBP31.17■■■□□ 2.58
GDF1-201ENST00000247005 HDGFL2Q7Z4V5 671 aaPredicted RBP31.17■■■□□ 2.58
GDF1-201ENST00000247005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.16■■■□□ 2.58
GDF1-201ENST00000247005 SPATA31D1Q6ZQQ2 1576 aa31.16■■■□□ 2.58
GDF1-201ENST00000247005 WDR63Q8IWG1 891 aa31.16■■■□□ 2.58
GDF1-201ENST00000247005 BCL2L13Q9BXK5 485 aa31.16■■■□□ 2.58
GDF1-201ENST00000247005 COG6Q9Y2V7 657 aa31.14■■■□□ 2.58
GDF1-201ENST00000247005 ESF1Q9H501 851 aaKnown RBP31.14■■■□□ 2.57
GDF1-201ENST00000247005 RARSP54136 660 aaKnown RBP31.13■■■□□ 2.57
GDF1-201ENST00000247005 NLRP1Q9C000 1473 aa31.13■■■□□ 2.57
GDF1-201ENST00000247005 CCDC27Q2M243 656 aa31.12■■■□□ 2.57
GDF1-201ENST00000247005 TNNQ9UQP3 1299 aa31.12■■■□□ 2.57
GDF1-201ENST00000247005 ZMYM3Q14202 1370 aa31.11■■■□□ 2.57
GDF1-201ENST00000247005 PLEKHF1Q96S99 279 aa31.09■■■□□ 2.57
GDF1-201ENST00000247005 TXNDC2Q86VQ3 553 aa31.09■■■□□ 2.57
GDF1-201ENST00000247005 METP08581 1390 aa31.08■■■□□ 2.57
GDF1-201ENST00000247005 PDE3AQ14432 1141 aa31.08■■■□□ 2.57
GDF1-201ENST00000247005 ZBTB47Q9UFB7 747 aaPredicted RBP31.08■■■□□ 2.57
GDF1-201ENST00000247005 IGHDP01880 384 aa31.07■■■□□ 2.57
GDF1-201ENST00000247005 RGS3P49796 1198 aa31.07■■■□□ 2.57
GDF1-201ENST00000247005 PPM1GO15355 546 aaPredicted RBP31.07■■■□□ 2.56
GDF1-201ENST00000247005 TSR2Q969E8 191 aaKnown RBP31.07■■■□□ 2.56
GDF1-201ENST00000247005 COL3A1P02461 1466 aaPredicted RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms