RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 EVC2Q86UK5 1308 aa26.62■■□□□ 1.85
SBDS-201ENST00000246868 KCNA6P17658 529 aa26.61■■□□□ 1.85
SBDS-201ENST00000246868 MINK1Q8N4C8 1332 aaPredicted RBP26.61■■□□□ 1.85
SBDS-201ENST00000246868 PLEKHH1Q9ULM0 1364 aa26.61■■□□□ 1.85
SBDS-201ENST00000246868 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
SBDS-201ENST00000246868 DMRT2Q9Y5R5 561 aa26.59■■□□□ 1.85
SBDS-201ENST00000246868 NWD1Q149M9 1564 aa26.57■■□□□ 1.84
SBDS-201ENST00000246868 TULP4Q9NRJ4 1543 aa26.55■■□□□ 1.84
SBDS-201ENST00000246868 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
SBDS-201ENST00000246868 PUS7Q96PZ0 661 aaKnown RBP26.54■■□□□ 1.84
SBDS-201ENST00000246868 SRPK2P78362 688 aaKnown RBP26.52■■□□□ 1.84
SBDS-201ENST00000246868 NKTRP30414 1462 aaKnown RBP26.52■■□□□ 1.84
SBDS-201ENST00000246868 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.5■■□□□ 1.83
SBDS-201ENST00000246868 CDK19Q9BWU1 502 aa26.5■■□□□ 1.83
SBDS-201ENST00000246868 ADGRB2O60241 1585 aa26.49■■□□□ 1.83
SBDS-201ENST00000246868 WASLO00401 505 aaPredicted RBP26.48■■□□□ 1.83
SBDS-201ENST00000246868 CABP2Q9NPB3 220 aa26.47■■□□□ 1.83
SBDS-201ENST00000246868 ATAD2Q6PL18 1390 aa26.47■■□□□ 1.83
SBDS-201ENST00000246868 PROSER2Q86WR7 435 aaPredicted RBP26.47■■□□□ 1.83
SBDS-201ENST00000246868 C14orf37Q86TY3 774 aa26.43■■□□□ 1.82
SBDS-201ENST00000246868 MYOM1P52179 1685 aa26.42■■□□□ 1.82
SBDS-201ENST00000246868 STRCP1A6NGW2 1772 aa26.42■■□□□ 1.82
SBDS-201ENST00000246868 TMC1Q8TDI8 760 aa26.42■■□□□ 1.82
SBDS-201ENST00000246868 NINLQ9Y2I6 1382 aa26.42■■□□□ 1.82
SBDS-201ENST00000246868 ADGRL3Q9HAR2 1447 aa26.4■■□□□ 1.82
SBDS-201ENST00000246868 NALCNQ8IZF0 1738 aa26.39■■□□□ 1.81
SBDS-201ENST00000246868 ZNF335Q9H4Z2 1342 aaPredicted RBP26.38■■□□□ 1.81
SBDS-201ENST00000246868 RBM33Q96EV2 1170 aaKnown RBP26.38■■□□□ 1.81
SBDS-201ENST00000246868 PANK3Q9H999 370 aa26.38■■□□□ 1.81
SBDS-201ENST00000246868 NCOA3Q9Y6Q9 1424 aa26.37■■□□□ 1.81
SBDS-201ENST00000246868 CDC42BPGQ6DT37 1551 aa26.37■■□□□ 1.81
SBDS-201ENST00000246868 NUDT16Q96DE0 195 aaKnown RBP26.36■■□□□ 1.81
SBDS-201ENST00000246868 SLC12A5Q9H2X9 1139 aa26.36■■□□□ 1.81
SBDS-201ENST00000246868 TMEM94Q12767 1356 aa26.35■■□□□ 1.81
SBDS-201ENST00000246868 CCDC61Q9Y6R9 512 aa26.33■■□□□ 1.81
SBDS-201ENST00000246868 ATP7BP35670 1465 aa26.32■■□□□ 1.8
SBDS-201ENST00000246868 FMN2Q9NZ56 1722 aa26.32■■□□□ 1.8
SBDS-201ENST00000246868 C19orf44Q9H6X5 657 aa26.32■■□□□ 1.8
SBDS-201ENST00000246868 ANP32CO43423 234 aa26.31■■□□□ 1.8
SBDS-201ENST00000246868 TERF2IPQ9NYB0 399 aa26.31■■□□□ 1.8
SBDS-201ENST00000246868 PPIP5K1Q6PFW1 1433 aa26.3■■□□□ 1.8
SBDS-201ENST00000246868 ANKARQ7Z5J8 1434 aa26.3■■□□□ 1.8
SBDS-201ENST00000246868 ANKRD36BQ8N2N9 1353 aa26.3■■□□□ 1.8
SBDS-201ENST00000246868 CABP1Q9NZU7 370 aa26.3■■□□□ 1.8
SBDS-201ENST00000246868 NUTM2FA1L443 756 aa26.29■■□□□ 1.8
SBDS-201ENST00000246868 KNSTRNQ9Y448 316 aa26.29■■□□□ 1.8
SBDS-201ENST00000246868 PRR36Q9H6K5 1346 aa26.29■■□□□ 1.8
SBDS-201ENST00000246868 LRRC7Q96NW7 1537 aa26.29■■□□□ 1.8
SBDS-201ENST00000246868 HDGFL2Q7Z4V5 671 aaPredicted RBP26.28■■□□□ 1.8
SBDS-201ENST00000246868 ITSN1Q15811 1721 aa26.28■■□□□ 1.8
SBDS-201ENST00000246868 MSH6P52701 1360 aa26.26■■□□□ 1.8
SBDS-201ENST00000246868 DCCP43146 1447 aa26.26■■□□□ 1.79
SBDS-201ENST00000246868 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
SBDS-201ENST00000246868 TOPAZ1Q8N9V7 1692 aa26.25■■□□□ 1.79
SBDS-201ENST00000246868 ATF3P18847 181 aa26.25■■□□□ 1.79
SBDS-201ENST00000246868 USP32Q8NFA0 1604 aa26.25■■□□□ 1.79
SBDS-201ENST00000246868 A0A1W2PP64 1363 aa26.24■■□□□ 1.79
SBDS-201ENST00000246868 XIRP1Q702N8 1843 aaKnown RBP26.22■■□□□ 1.79
SBDS-201ENST00000246868 RGPD8O14715 1765 aaPredicted RBP26.22■■□□□ 1.79
SBDS-201ENST00000246868 PLEKHG3A1L390 1219 aa26.21■■□□□ 1.79
SBDS-201ENST00000246868 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
SBDS-201ENST00000246868 MIER1Q8N108 512 aa26.21■■□□□ 1.79
SBDS-201ENST00000246868 CARD14Q9BXL6 1004 aa26.21■■□□□ 1.79
SBDS-201ENST00000246868 NSD3Q9BZ95 1437 aa26.21■■□□□ 1.79
SBDS-201ENST00000246868 CD163L1Q9NR16 1453 aa26.21■■□□□ 1.79
SBDS-201ENST00000246868 ZNF692Q9BU19 519 aaPredicted RBP26.19■■□□□ 1.78
SBDS-201ENST00000246868 KTN1Q86UP2 1357 aaKnown RBP26.18■■□□□ 1.78
SBDS-201ENST00000246868 CNGB1Q14028 1251 aaPredicted RBP26.17■■□□□ 1.78
SBDS-201ENST00000246868 CPSF1Q10570 1443 aaKnown RBP26.17■■□□□ 1.78
SBDS-201ENST00000246868 CGNL1Q0VF96 1302 aa26.17■■□□□ 1.78
SBDS-201ENST00000246868 PRKRIP1Q9H875 184 aaPredicted RBP26.17■■□□□ 1.78
SBDS-201ENST00000246868 NPC1L1Q9UHC9 1359 aa26.16■■□□□ 1.78
SBDS-201ENST00000246868 ACEP12821 1306 aa26.16■■□□□ 1.78
SBDS-201ENST00000246868 NGDNQ8NEJ9 315 aaKnown RBP26.16■■□□□ 1.78
SBDS-201ENST00000246868 AKAP12Q02952 1782 aa26.16■■□□□ 1.78
SBDS-201ENST00000246868 ESCO1Q5FWF5 840 aa26.15■■□□□ 1.78
SBDS-201ENST00000246868 AMER1Q5JTC6 1135 aaPredicted RBP26.15■■□□□ 1.78
SBDS-201ENST00000246868 PMFBP1Q8TBY8 1022 aa26.15■■□□□ 1.78
SBDS-201ENST00000246868 LTBP4Q8N2S1 1624 aa26.15■■□□□ 1.78
SBDS-201ENST00000246868 CC2D1BQ5T0F9 858 aaKnown RBP26.14■■□□□ 1.78
SBDS-201ENST00000246868 PHF8Q9UPP1 1060 aa26.14■■□□□ 1.78
SBDS-201ENST00000246868 C1orf167Q5SNV9 1468 aa26.13■■□□□ 1.77
SBDS-201ENST00000246868 RALBP1Q15311 655 aa26.13■■□□□ 1.77
SBDS-201ENST00000246868 POLR3AO14802 1390 aaPredicted RBP26.13■■□□□ 1.77
SBDS-201ENST00000246868 MST1RQ04912 1400 aa26.12■■□□□ 1.77
SBDS-201ENST00000246868 EDC4Q6P2E9 1401 aaKnown RBP26.12■■□□□ 1.77
SBDS-201ENST00000246868 MON2Q7Z3U7 1717 aa26.12■■□□□ 1.77
SBDS-201ENST00000246868 NSD2O96028 1365 aa26.1■■□□□ 1.77
SBDS-201ENST00000246868 USP6P35125 1406 aa26.08■■□□□ 1.77
SBDS-201ENST00000246868 KIF1AQ12756 1690 aa26.08■■□□□ 1.76
SBDS-201ENST00000246868 PARD3Q8TEW0 1356 aa26.08■■□□□ 1.76
SBDS-201ENST00000246868 ORAI2Q96SN7 254 aa26.07■■□□□ 1.76
SBDS-201ENST00000246868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.06■■□□□ 1.76
SBDS-201ENST00000246868 KIF20BQ96Q89 1820 aa26.04■■□□□ 1.76
SBDS-201ENST00000246868 CCER2I3L3R5 266 aa26.04■■□□□ 1.76
SBDS-201ENST00000246868 SLAIN2Q9P270 581 aa26.03■■□□□ 1.76
SBDS-201ENST00000246868 PSME1Q06323 249 aa26.03■■□□□ 1.76
SBDS-201ENST00000246868 TTC21BQ7Z4L5 1316 aa26.03■■□□□ 1.76
SBDS-201ENST00000246868 MYBBP1AQ9BQG0 1328 aaKnown RBP26.03■■□□□ 1.76
SBDS-201ENST00000246868 BRD4O60885 1362 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms