RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 NOLC1Q14978 699 aaKnown RBP eCLIP12□□□□□ -0.49
IRF1-201ENST00000245414 OGFRQ9NZT2 677 aa12□□□□□ -0.49
IRF1-201ENST00000245414 BAG4O95429 457 aaKnown RBP12□□□□□ -0.49
IRF1-201ENST00000245414 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
IRF1-201ENST00000245414 RBM27Q9P2N5 1060 aaKnown RBP12□□□□□ -0.49
IRF1-201ENST00000245414 ZNF445P59923 1031 aa12□□□□□ -0.49
IRF1-201ENST00000245414 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
IRF1-201ENST00000245414 FEZ1Q99689 392 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 SYCE3A1L190 88 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
IRF1-201ENST00000245414 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
IRF1-201ENST00000245414 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
IRF1-201ENST00000245414 DIAPH3Q9NSV4 1193 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 CASKIN1Q8WXD9 1431 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
IRF1-201ENST00000245414 SAMD9Q5K651 1589 aa11.98□□□□□ -0.49
IRF1-201ENST00000245414 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
IRF1-201ENST00000245414 SMC5Q8IY18 1101 aa11.98□□□□□ -0.49
IRF1-201ENST00000245414 CNPY4Q8N129 248 aa11.98□□□□□ -0.49
IRF1-201ENST00000245414 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
IRF1-201ENST00000245414 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
IRF1-201ENST00000245414 DENND4BO75064 1496 aaPredicted RBP11.98□□□□□ -0.49
IRF1-201ENST00000245414 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
IRF1-201ENST00000245414 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
IRF1-201ENST00000245414 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
IRF1-201ENST00000245414 TSPYL1Q9H0U9 437 aa11.97□□□□□ -0.49
IRF1-201ENST00000245414 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
IRF1-201ENST00000245414 ANKRD30BQ9BXX2 1392 aa11.97□□□□□ -0.49
IRF1-201ENST00000245414 GRIN2BQ13224 1484 aa11.97□□□□□ -0.49
IRF1-201ENST00000245414 FYCO1Q9BQS8 1478 aa11.97□□□□□ -0.49
IRF1-201ENST00000245414 TTC12Q9H892 705 aaPredicted RBP11.96□□□□□ -0.49
IRF1-201ENST00000245414 CLGNO14967 610 aa11.96□□□□□ -0.5
IRF1-201ENST00000245414 SLC20A2Q08357 652 aa11.96□□□□□ -0.5
IRF1-201ENST00000245414 IBTKQ9P2D0 1353 aaPredicted RBP11.95□□□□□ -0.5
IRF1-201ENST00000245414 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
IRF1-201ENST00000245414 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
IRF1-201ENST00000245414 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
IRF1-201ENST00000245414 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
IRF1-201ENST00000245414 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
IRF1-201ENST00000245414 PKD2Q13563 968 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 PDE3AQ14432 1141 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 KDM6BO15054 1643 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
IRF1-201ENST00000245414 CAPN2P17655 700 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 SLFN5Q08AF3 891 aa11.94□□□□□ -0.5
IRF1-201ENST00000245414 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
IRF1-201ENST00000245414 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
IRF1-201ENST00000245414 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
IRF1-201ENST00000245414 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
IRF1-201ENST00000245414 PLEKHH1Q9ULM0 1364 aa11.93□□□□□ -0.5
IRF1-201ENST00000245414 RPRD2Q5VT52 1461 aaKnown RBP11.93□□□□□ -0.5
IRF1-201ENST00000245414 SLFN14P0C7P3 912 aa11.93□□□□□ -0.5
IRF1-201ENST00000245414 ZNF644Q9H582 1327 aaPredicted RBP11.93□□□□□ -0.5
IRF1-201ENST00000245414 LOC102724159A0A0B4J2E5 919 aa11.93□□□□□ -0.5
IRF1-201ENST00000245414 PWP2Q15269 919 aaKnown RBP11.93□□□□□ -0.5
IRF1-201ENST00000245414 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
IRF1-201ENST00000245414 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
IRF1-201ENST00000245414 SNX21Q969T3 373 aa11.92□□□□□ -0.5
IRF1-201ENST00000245414 GTF2A1P52655 376 aaPredicted RBP11.92□□□□□ -0.5
IRF1-201ENST00000245414 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
IRF1-201ENST00000245414 DDIT3P35638 169 aa11.92□□□□□ -0.5
IRF1-201ENST00000245414 TERF2Q15554 542 aa11.92□□□□□ -0.5
IRF1-201ENST00000245414 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
IRF1-201ENST00000245414 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
IRF1-201ENST00000245414 RSPH14Q9UHP6 348 aa11.91□□□□□ -0.5
IRF1-201ENST00000245414 RGL3Q3MIN7 710 aa11.91□□□□□ -0.5
IRF1-201ENST00000245414 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
IRF1-201ENST00000245414 KRT222Q8N1A0 295 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 TSPY26PQ9H489 355 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 TEX14Q8IWB6 1497 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 APAF1O14727 1248 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 FAM193AP78312 1265 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 NUCB2P80303 420 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 MLECQ14165 292 aa11.9□□□□□ -0.5
IRF1-201ENST00000245414 BCCIPQ9P287 314 aaKnown RBP eCLIP11.9□□□□□ -0.5
IRF1-201ENST00000245414 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
IRF1-201ENST00000245414 GPATCH11Q8N954 259 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
IRF1-201ENST00000245414 SLC52A1Q9NWF4 448 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 KCNG1Q9UIX4 513 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
IRF1-201ENST00000245414 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
IRF1-201ENST00000245414 SPINK5Q9NQ38 1064 aaPredicted RBP11.89□□□□□ -0.51
IRF1-201ENST00000245414 FKBP5Q13451 457 aaPredicted RBP11.88□□□□□ -0.51
IRF1-201ENST00000245414 ZMYM4Q5VZL5 1548 aa11.88□□□□□ -0.51
IRF1-201ENST00000245414 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
IRF1-201ENST00000245414 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
IRF1-201ENST00000245414 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
IRF1-201ENST00000245414 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
IRF1-201ENST00000245414 ANKRD7Q92527 254 aa11.88□□□□□ -0.51
IRF1-201ENST00000245414 FEZ2Q9UHY8 353 aaPredicted RBP11.88□□□□□ -0.51
IRF1-201ENST00000245414 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms