RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 ZFYVE16Q7Z3T8 1539 aa17.76■□□□□ 0.43
EGR1-201ENST00000239938 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
EGR1-201ENST00000239938 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
EGR1-201ENST00000239938 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
EGR1-201ENST00000239938 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
EGR1-201ENST00000239938 ZMYM3Q14202 1370 aa17.75■□□□□ 0.43
EGR1-201ENST00000239938 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
EGR1-201ENST00000239938 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
EGR1-201ENST00000239938 CHD1O14646 1710 aa17.74■□□□□ 0.43
EGR1-201ENST00000239938 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
EGR1-201ENST00000239938 GZF1Q9H116 711 aaPredicted RBP17.73■□□□□ 0.43
EGR1-201ENST00000239938 MYOM2P54296 1465 aa17.73■□□□□ 0.43
EGR1-201ENST00000239938 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
EGR1-201ENST00000239938 FSD2A1L4K1 749 aa17.72■□□□□ 0.43
EGR1-201ENST00000239938 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
EGR1-201ENST00000239938 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
EGR1-201ENST00000239938 AAMPQ13685 434 aa17.72■□□□□ 0.43
EGR1-201ENST00000239938 L1TD1Q5T7N2 865 aaKnown RBP17.72■□□□□ 0.43
EGR1-201ENST00000239938 MORC1Q86VD1 984 aa17.72■□□□□ 0.43
EGR1-201ENST00000239938 UPF2Q9HAU5 1272 aaKnown RBP17.72■□□□□ 0.43
EGR1-201ENST00000239938 NEURL4Q96JN8 1562 aa17.72■□□□□ 0.43
EGR1-201ENST00000239938 IFT172Q9UG01 1749 aa17.71■□□□□ 0.43
EGR1-201ENST00000239938 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
EGR1-201ENST00000239938 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
EGR1-201ENST00000239938 MCM4P33991 863 aa17.71■□□□□ 0.43
EGR1-201ENST00000239938 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
EGR1-201ENST00000239938 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
EGR1-201ENST00000239938 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
EGR1-201ENST00000239938 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
EGR1-201ENST00000239938 MTHFSP49914 203 aa17.69■□□□□ 0.42
EGR1-201ENST00000239938 ZNF518AQ6AHZ1 1483 aa17.68■□□□□ 0.42
EGR1-201ENST00000239938 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
EGR1-201ENST00000239938 KANK1Q14678 1352 aa17.68■□□□□ 0.42
EGR1-201ENST00000239938 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
EGR1-201ENST00000239938 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
EGR1-201ENST00000239938 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
EGR1-201ENST00000239938 KIF3BO15066 747 aa17.67■□□□□ 0.42
EGR1-201ENST00000239938 KIF1BO60333 1816 aa17.66■□□□□ 0.42
EGR1-201ENST00000239938 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
EGR1-201ENST00000239938 GOLGA6L3A6NEY3 463 aa17.66■□□□□ 0.42
EGR1-201ENST00000239938 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
EGR1-201ENST00000239938 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
EGR1-201ENST00000239938 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
EGR1-201ENST00000239938 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
EGR1-201ENST00000239938 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
EGR1-201ENST00000239938 ATP7AQ04656 1500 aa17.63■□□□□ 0.41
EGR1-201ENST00000239938 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
EGR1-201ENST00000239938 TRAK2O60296 914 aa17.63■□□□□ 0.41
EGR1-201ENST00000239938 ZKSCAN2Q63HK3 967 aa17.63■□□□□ 0.41
EGR1-201ENST00000239938 DZIP1LQ8IYY4 767 aaKnown RBP17.63■□□□□ 0.41
EGR1-201ENST00000239938 NOS1P29475 1434 aa17.62■□□□□ 0.41
EGR1-201ENST00000239938 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
EGR1-201ENST00000239938 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
EGR1-201ENST00000239938 TRIM27P14373 513 aa17.61■□□□□ 0.41
EGR1-201ENST00000239938 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
EGR1-201ENST00000239938 ADGRB2O60241 1585 aa17.61■□□□□ 0.41
EGR1-201ENST00000239938 NAP1L5Q96NT1 182 aaPredicted RBP17.61■□□□□ 0.41
EGR1-201ENST00000239938 USP32Q8NFA0 1604 aa17.61■□□□□ 0.41
EGR1-201ENST00000239938 SETBP1Q9Y6X0 1596 aa17.6■□□□□ 0.41
EGR1-201ENST00000239938 DDIT3P35638 169 aa17.6■□□□□ 0.41
EGR1-201ENST00000239938 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
EGR1-201ENST00000239938 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
EGR1-201ENST00000239938 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
EGR1-201ENST00000239938 PPRC1Q5VV67 1664 aaKnown RBP17.59■□□□□ 0.41
EGR1-201ENST00000239938 EFCAB6Q5THR3 1501 aa17.59■□□□□ 0.41
EGR1-201ENST00000239938 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
EGR1-201ENST00000239938 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
EGR1-201ENST00000239938 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
EGR1-201ENST00000239938 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
EGR1-201ENST00000239938 CD109Q6YHK3 1445 aa17.58■□□□□ 0.41
EGR1-201ENST00000239938 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
EGR1-201ENST00000239938 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.4
EGR1-201ENST00000239938 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
EGR1-201ENST00000239938 CLCN1P35523 988 aa17.57■□□□□ 0.4
EGR1-201ENST00000239938 SMC5Q8IY18 1101 aa17.57■□□□□ 0.4
EGR1-201ENST00000239938 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
EGR1-201ENST00000239938 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
EGR1-201ENST00000239938 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
EGR1-201ENST00000239938 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
EGR1-201ENST00000239938 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
EGR1-201ENST00000239938 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
EGR1-201ENST00000239938 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
EGR1-201ENST00000239938 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
EGR1-201ENST00000239938 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
EGR1-201ENST00000239938 NOB1Q9ULX3 412 aaKnown RBP17.55■□□□□ 0.4
EGR1-201ENST00000239938 PPLO60437 1756 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 TMEM57Q8N5G2 664 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 ADGRL1O94910 1474 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
EGR1-201ENST00000239938 MRE11P49959 708 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 GRPEL1Q9HAV7 217 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 FANCAO15360 1455 aa17.54■□□□□ 0.4
EGR1-201ENST00000239938 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
EGR1-201ENST00000239938 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
EGR1-201ENST00000239938 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
EGR1-201ENST00000239938 DDX19BQ9UMR2 479 aa17.53■□□□□ 0.4
EGR1-201ENST00000239938 CFAP65Q6ZU64 1925 aaKnown RBP17.52■□□□□ 0.4
EGR1-201ENST00000239938 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms