RNA–Protein interactions for RNA: ENST00000234626.10

CDC7-201, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-201ENST00000234626 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
CDC7-201ENST00000234626 PPP2R1AP30153 589 aa8.83□□□□□ -1
CDC7-201ENST00000234626 N4BP2Q86UW6 1770 aaPredicted RBP8.83□□□□□ -1
CDC7-201ENST00000234626 ATP7BP35670 1465 aa8.82□□□□□ -1
CDC7-201ENST00000234626 FER1L4A9Z1Z3 1794 aa8.82□□□□□ -1
CDC7-201ENST00000234626 RGL3Q3MIN7 710 aa8.82□□□□□ -1
CDC7-201ENST00000234626 ANKRD36BQ8N2N9 1353 aa8.82□□□□□ -1
CDC7-201ENST00000234626 PLEKHH1Q9ULM0 1364 aa8.82□□□□□ -1
CDC7-201ENST00000234626 SLC52A1Q9NWF4 448 aa8.82□□□□□ -1
CDC7-201ENST00000234626 ABCC11Q96J66 1382 aa8.82□□□□□ -1
CDC7-201ENST00000234626 ARHGAP23Q9P227 1491 aa8.82□□□□□ -1
CDC7-201ENST00000234626 CFAP70Q5T0N1 1121 aa8.81□□□□□ -1
CDC7-201ENST00000234626 YTHDC2Q9H6S0 1430 aaKnown RBP8.81□□□□□ -1
CDC7-201ENST00000234626 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
CDC7-201ENST00000234626 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
CDC7-201ENST00000234626 FAM9BQ8IZU0 186 aa8.8□□□□□ -1
CDC7-201ENST00000234626 NGEFQ8N5V2 710 aa8.8□□□□□ -1
CDC7-201ENST00000234626 FAM135BQ49AJ0 1406 aa8.8□□□□□ -1
CDC7-201ENST00000234626 FANCIQ9NVI1 1328 aa8.79□□□□□ -1
CDC7-201ENST00000234626 PHRF1Q9P1Y6 1649 aaKnown RBP8.79□□□□□ -1
CDC7-201ENST00000234626 CPSF1Q10570 1443 aaKnown RBP8.79□□□□□ -1
CDC7-201ENST00000234626 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
CDC7-201ENST00000234626 CENPJQ9HC77 1338 aaPredicted RBP8.78□□□□□ -1
CDC7-201ENST00000234626 RAPGEF3O95398 923 aa8.78□□□□□ -1
CDC7-201ENST00000234626 SIRT1Q96EB6 747 aa8.78□□□□□ -1
CDC7-201ENST00000234626 TMC1Q8TDI8 760 aa8.77□□□□□ -1
CDC7-201ENST00000234626 CHD2O14647 1828 aaKnown RBP8.77□□□□□ -1.01
CDC7-201ENST00000234626 LRRC37A3O60309 1634 aa8.76□□□□□ -1.01
CDC7-201ENST00000234626 NSD3Q9BZ95 1437 aa8.76□□□□□ -1.01
CDC7-201ENST00000234626 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
CDC7-201ENST00000234626 IDI1Q13907 227 aa8.76□□□□□ -1.01
CDC7-201ENST00000234626 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
CDC7-201ENST00000234626 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
CDC7-201ENST00000234626 DUSP27Q5VZP5 1158 aa8.75□□□□□ -1.01
CDC7-201ENST00000234626 RGPD8O14715 1765 aaPredicted RBP8.75□□□□□ -1.01
CDC7-201ENST00000234626 NKTRP30414 1462 aaKnown RBP8.75□□□□□ -1.01
CDC7-201ENST00000234626 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
CDC7-201ENST00000234626 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
CDC7-201ENST00000234626 NEFLP07196 543 aa8.74□□□□□ -1.01
CDC7-201ENST00000234626 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
CDC7-201ENST00000234626 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
CDC7-201ENST00000234626 KDM2BQ8NHM5 1336 aa8.74□□□□□ -1.01
CDC7-201ENST00000234626 ADAMTS13Q76LX8 1427 aa8.74□□□□□ -1.01
CDC7-201ENST00000234626 PPIP5K1Q6PFW1 1433 aa8.73□□□□□ -1.01
CDC7-201ENST00000234626 RIMS2Q9UQ26 1411 aa8.73□□□□□ -1.01
CDC7-201ENST00000234626 SLFN5Q08AF3 891 aa8.73□□□□□ -1.01
CDC7-201ENST00000234626 A0A1W2PP64 1363 aa8.73□□□□□ -1.01
CDC7-201ENST00000234626 SSH2Q76I76 1423 aa8.73□□□□□ -1.01
CDC7-201ENST00000234626 CAMTA1Q9Y6Y1 1673 aa8.72□□□□□ -1.01
CDC7-201ENST00000234626 PIK3C2AO00443 1686 aa8.72□□□□□ -1.01
CDC7-201ENST00000234626 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
CDC7-201ENST00000234626 TUBGCP6Q96RT7 1819 aa8.72□□□□□ -1.01
CDC7-201ENST00000234626 CDK12Q9NYV4 1490 aaPredicted RBP8.71□□□□□ -1.01
CDC7-201ENST00000234626 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.01
CDC7-201ENST00000234626 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.02
CDC7-201ENST00000234626 ZMYM3Q14202 1370 aa8.71□□□□□ -1.02
CDC7-201ENST00000234626 RCAN3Q9UKA8 241 aa8.7□□□□□ -1.02
CDC7-201ENST00000234626 PTCH1Q13635 1447 aa8.7□□□□□ -1.02
CDC7-201ENST00000234626 CC2D1BQ5T0F9 858 aaKnown RBP8.7□□□□□ -1.02
CDC7-201ENST00000234626 AATKQ6ZMQ8 1374 aa8.69□□□□□ -1.02
CDC7-201ENST00000234626 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
CDC7-201ENST00000234626 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
CDC7-201ENST00000234626 EVC2Q86UK5 1308 aa8.69□□□□□ -1.02
CDC7-201ENST00000234626 CDCA7LQ96GN5 454 aa8.69□□□□□ -1.02
CDC7-201ENST00000234626 PLEKHG1Q9ULL1 1385 aa8.69□□□□□ -1.02
CDC7-201ENST00000234626 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
CDC7-201ENST00000234626 MSH5O43196 834 aa8.68□□□□□ -1.02
CDC7-201ENST00000234626 ADAMTS7Q9UKP4 1686 aa8.68□□□□□ -1.02
CDC7-201ENST00000234626 EDC4Q6P2E9 1401 aaKnown RBP8.67□□□□□ -1.02
CDC7-201ENST00000234626 CACNA1FO60840 1977 aa8.67□□□□□ -1.02
CDC7-201ENST00000234626 GGT6Q6P531 493 aa8.67□□□□□ -1.02
CDC7-201ENST00000234626 SPINK5Q9NQ38 1064 aaPredicted RBP8.66□□□□□ -1.02
CDC7-201ENST00000234626 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
CDC7-201ENST00000234626 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
CDC7-201ENST00000234626 OVOS2A0A0J9YW53 1432 aa8.66□□□□□ -1.02
CDC7-201ENST00000234626 OVOS2Q6IE36 1432 aa8.66□□□□□ -1.02
CDC7-201ENST00000234626 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
CDC7-201ENST00000234626 FAM69CQ0P6D2 419 aa8.65□□□□□ -1.02
CDC7-201ENST00000234626 BCANQ96GW7 911 aa8.65□□□□□ -1.02
CDC7-201ENST00000234626 METP08581 1390 aa8.65□□□□□ -1.02
CDC7-201ENST00000234626 CEP170BQ9Y4F5 1589 aaPredicted RBP8.65□□□□□ -1.02
CDC7-201ENST00000234626 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
CDC7-201ENST00000234626 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
CDC7-201ENST00000234626 LMTK3Q96Q04 1460 aa8.65□□□□□ -1.03
CDC7-201ENST00000234626 MS4A1P11836 297 aa8.65□□□□□ -1.03
CDC7-201ENST00000234626 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
CDC7-201ENST00000234626 LMO7Q8WWI1 1683 aa8.64□□□□□ -1.03
CDC7-201ENST00000234626 LTN1O94822 1766 aa8.64□□□□□ -1.03
CDC7-201ENST00000234626 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
CDC7-201ENST00000234626 TMEM132EQ6IEE7 984 aa8.64□□□□□ -1.03
CDC7-201ENST00000234626 DMRT2Q9Y5R5 561 aa8.64□□□□□ -1.03
CDC7-201ENST00000234626 IL16Q14005 1332 aa8.64□□□□□ -1.03
CDC7-201ENST00000234626 FAM208AQ9UK61 1670 aaKnown RBP8.64□□□□□ -1.03
CDC7-201ENST00000234626 USP31Q70CQ4 1352 aa8.63□□□□□ -1.03
CDC7-201ENST00000234626 TNRQ92752 1358 aa8.63□□□□□ -1.03
CDC7-201ENST00000234626 MST1RQ04912 1400 aa8.63□□□□□ -1.03
CDC7-201ENST00000234626 E9PSI1 815 aa8.63□□□□□ -1.03
CDC7-201ENST00000234626 IRX6P78412 446 aaPredicted RBP8.63□□□□□ -1.03
CDC7-201ENST00000234626 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
CDC7-201ENST00000234626 WWC1Q8IX03 1113 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms