RNA–Protein interactions for RNA: ENST00000234389.3

GRIN3B-201, Transcript of glutamate ionotropic receptor NMDA type subunit 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRIN3B, Length 3,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3B-201ENST00000234389 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
GRIN3B-201ENST00000234389 VGFO15240 615 aaPredicted RBP23.27■■□□□ 1.32
GRIN3B-201ENST00000234389 C14orf93Q9H972 538 aaKnown RBP23.27■■□□□ 1.31
GRIN3B-201ENST00000234389 FRAT2O75474 233 aaPredicted RBP23.26■■□□□ 1.31
GRIN3B-201ENST00000234389 WWC1Q8IX03 1113 aa23.25■■□□□ 1.31
GRIN3B-201ENST00000234389 PTPRTO14522 1441 aa23.25■■□□□ 1.31
GRIN3B-201ENST00000234389 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
GRIN3B-201ENST00000234389 TRPM2O94759 1503 aa23.24■■□□□ 1.31
GRIN3B-201ENST00000234389 EIF2AK4Q9P2K8 1649 aaKnown RBP23.24■■□□□ 1.31
GRIN3B-201ENST00000234389 PNNQ9H307 717 aaKnown RBP23.23■■□□□ 1.31
GRIN3B-201ENST00000234389 MADDQ8WXG6 1647 aa23.22■■□□□ 1.31
GRIN3B-201ENST00000234389 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
GRIN3B-201ENST00000234389 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
GRIN3B-201ENST00000234389 ERVK-7P63135 1459 aa23.22■■□□□ 1.31
GRIN3B-201ENST00000234389 EVC2Q86UK5 1308 aa23.21■■□□□ 1.31
GRIN3B-201ENST00000234389 ZNF518AQ6AHZ1 1483 aa23.21■■□□□ 1.31
GRIN3B-201ENST00000234389 CGNL1Q0VF96 1302 aa23.21■■□□□ 1.31
GRIN3B-201ENST00000234389 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
GRIN3B-201ENST00000234389 ESF1Q9H501 851 aaKnown RBP23.2■■□□□ 1.3
GRIN3B-201ENST00000234389 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
GRIN3B-201ENST00000234389 NCKAP5LQ9HCH0 1330 aa23.2■■□□□ 1.3
GRIN3B-201ENST00000234389 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
GRIN3B-201ENST00000234389 BACH2Q9BYV9 841 aa23.2■■□□□ 1.3
GRIN3B-201ENST00000234389 BLMP54132 1417 aaPredicted RBP23.19■■□□□ 1.3
GRIN3B-201ENST00000234389 SPHKAPQ2M3C7 1700 aa23.18■■□□□ 1.3
GRIN3B-201ENST00000234389 E9PSI1 815 aa23.18■■□□□ 1.3
GRIN3B-201ENST00000234389 IGHDP01880 384 aa23.17■■□□□ 1.3
GRIN3B-201ENST00000234389 HMOX1P09601 288 aa23.17■■□□□ 1.3
GRIN3B-201ENST00000234389 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
GRIN3B-201ENST00000234389 RRP9O43818 475 aaKnown RBP23.15■■□□□ 1.3
GRIN3B-201ENST00000234389 PDE4CQ08493 712 aa23.14■■□□□ 1.3
GRIN3B-201ENST00000234389 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
GRIN3B-201ENST00000234389 THUMPD2Q9BTF0 503 aaKnown RBP23.13■■□□□ 1.29
GRIN3B-201ENST00000234389 TXNDC2Q86VQ3 553 aa23.13■■□□□ 1.29
GRIN3B-201ENST00000234389 CEP152O94986 1710 aa23.12■■□□□ 1.29
GRIN3B-201ENST00000234389 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
GRIN3B-201ENST00000234389 RLBP1P12271 317 aa23.11■■□□□ 1.29
GRIN3B-201ENST00000234389 DDRGK1Q96HY6 314 aa23.11■■□□□ 1.29
GRIN3B-201ENST00000234389 CDK19Q9BWU1 502 aa23.11■■□□□ 1.29
GRIN3B-201ENST00000234389 POGZQ7Z3K3 1410 aa23.1■■□□□ 1.29
GRIN3B-201ENST00000234389 MAPK8IP3Q9UPT6 1336 aa23.1■■□□□ 1.29
GRIN3B-201ENST00000234389 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
GRIN3B-201ENST00000234389 AAMPQ13685 434 aa23.1■■□□□ 1.29
GRIN3B-201ENST00000234389 TET3O43151 1660 aa23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 ABCA6Q8N139 1617 aa23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 PPRC1Q5VV67 1664 aaKnown RBP23.09■■□□□ 1.29
GRIN3B-201ENST00000234389 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
GRIN3B-201ENST00000234389 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
GRIN3B-201ENST00000234389 EXOSC9Q06265 439 aaKnown RBP23.06■■□□□ 1.28
GRIN3B-201ENST00000234389 INO80Q9ULG1 1556 aaPredicted RBP23.06■■□□□ 1.28
GRIN3B-201ENST00000234389 ABCA9Q8IUA7 1624 aa23.06■■□□□ 1.28
GRIN3B-201ENST00000234389 FGD1P98174 961 aa23.06■■□□□ 1.28
GRIN3B-201ENST00000234389 ARID3AQ99856 593 aa23.05■■□□□ 1.28
GRIN3B-201ENST00000234389 RIPK4P57078 832 aa23.05■■□□□ 1.28
GRIN3B-201ENST00000234389 RNF17Q9BXT8 1623 aaKnown RBP23.05■■□□□ 1.28
GRIN3B-201ENST00000234389 EFCAB6Q5THR3 1501 aa23.04■■□□□ 1.28
GRIN3B-201ENST00000234389 FYB1O15117 783 aa23.04■■□□□ 1.28
GRIN3B-201ENST00000234389 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
GRIN3B-201ENST00000234389 RRS1Q15050 365 aaKnown RBP23.03■■□□□ 1.28
GRIN3B-201ENST00000234389 MAP3K4Q9Y6R4 1608 aa23.03■■□□□ 1.28
GRIN3B-201ENST00000234389 ITPRIPQ8IWB1 547 aa23.03■■□□□ 1.28
GRIN3B-201ENST00000234389 TERF2IPQ9NYB0 399 aa23.03■■□□□ 1.28
GRIN3B-201ENST00000234389 PIK3C2GO75747 1445 aa23.02■■□□□ 1.28
GRIN3B-201ENST00000234389 RARSP54136 660 aaKnown RBP23.02■■□□□ 1.28
GRIN3B-201ENST00000234389 HDGFL2Q7Z4V5 671 aaPredicted RBP23.02■■□□□ 1.28
GRIN3B-201ENST00000234389 KIF1BO60333 1816 aa23.02■■□□□ 1.28
GRIN3B-201ENST00000234389 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
GRIN3B-201ENST00000234389 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
GRIN3B-201ENST00000234389 NKTRP30414 1462 aaKnown RBP23.01■■□□□ 1.27
GRIN3B-201ENST00000234389 A0A1W2PP64 1363 aa23.01■■□□□ 1.27
GRIN3B-201ENST00000234389 IQGAP1P46940 1657 aa23.01■■□□□ 1.27
GRIN3B-201ENST00000234389 EMILIN1Q9Y6C2 1016 aa23■■□□□ 1.27
GRIN3B-201ENST00000234389 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
GRIN3B-201ENST00000234389 PCDHB15Q9Y5E8 787 aa23■■□□□ 1.27
GRIN3B-201ENST00000234389 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
GRIN3B-201ENST00000234389 SEC24BO95487 1268 aa22.99■■□□□ 1.27
GRIN3B-201ENST00000234389 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
GRIN3B-201ENST00000234389 NME9Q86XW9 330 aa22.99■■□□□ 1.27
GRIN3B-201ENST00000234389 BCL11BQ9C0K0 894 aaPredicted RBP22.99■■□□□ 1.27
GRIN3B-201ENST00000234389 SYNMO15061 1565 aa22.98■■□□□ 1.27
GRIN3B-201ENST00000234389 DIAPH1O60610 1272 aaKnown RBP22.97■■□□□ 1.27
GRIN3B-201ENST00000234389 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
GRIN3B-201ENST00000234389 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
GRIN3B-201ENST00000234389 KDM2BQ8NHM5 1336 aa22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 DCTN1Q14203 1278 aa22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 GZF1Q9H116 711 aaPredicted RBP22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 MS4A1P11836 297 aa22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 RPGRIP1LQ68CZ1 1315 aa22.96■■□□□ 1.27
GRIN3B-201ENST00000234389 TSPOAP1O95153 1857 aa22.95■■□□□ 1.26
GRIN3B-201ENST00000234389 TMPOP42166 694 aaKnown RBP22.95■■□□□ 1.26
GRIN3B-201ENST00000234389 TRMT2AQ8IZ69 625 aaKnown RBP22.94■■□□□ 1.26
GRIN3B-201ENST00000234389 RBM33Q96EV2 1170 aaKnown RBP22.93■■□□□ 1.26
GRIN3B-201ENST00000234389 MYH16Q9H6N6 1097 aa22.93■■□□□ 1.26
GRIN3B-201ENST00000234389 C1orf115Q9H7X2 142 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms