RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 KNDC1Q76NI1 1749 aa29.84■■■□□ 2.37
GCA-201ENST00000233612 ARHGAP23Q9P227 1491 aa29.83■■■□□ 2.37
GCA-201ENST00000233612 ATAD2Q6PL18 1390 aa29.83■■■□□ 2.37
GCA-201ENST00000233612 ANKRD36BQ8N2N9 1353 aa29.83■■■□□ 2.37
GCA-201ENST00000233612 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
GCA-201ENST00000233612 METP08581 1390 aa29.81■■■□□ 2.36
GCA-201ENST00000233612 FAM135BQ49AJ0 1406 aa29.8■■■□□ 2.36
GCA-201ENST00000233612 CABP2Q9NPB3 220 aa29.8■■■□□ 2.36
GCA-201ENST00000233612 SENP3Q9H4L4 574 aaPredicted RBP29.79■■■□□ 2.36
GCA-201ENST00000233612 NSD3Q9BZ95 1437 aa29.79■■■□□ 2.36
GCA-201ENST00000233612 SAFB2Q14151 953 aaKnown RBP eCLIP29.79■■■□□ 2.36
GCA-201ENST00000233612 ADAMTS13Q76LX8 1427 aa29.78■■■□□ 2.36
GCA-201ENST00000233612 MED14O60244 1454 aa29.77■■■□□ 2.36
GCA-201ENST00000233612 MINK1Q8N4C8 1332 aaPredicted RBP29.77■■■□□ 2.36
GCA-201ENST00000233612 LTKP29376 864 aa29.76■■■□□ 2.36
GCA-201ENST00000233612 SRPK2P78362 688 aaKnown RBP29.75■■■□□ 2.35
GCA-201ENST00000233612 THEMISQ8N1K5 641 aaPredicted RBP29.75■■■□□ 2.35
GCA-201ENST00000233612 CPS1P31327 1500 aa29.75■■■□□ 2.35
GCA-201ENST00000233612 NSD2O96028 1365 aa29.74■■■□□ 2.35
GCA-201ENST00000233612 BLMP54132 1417 aaPredicted RBP29.74■■■□□ 2.35
GCA-201ENST00000233612 TXNDC2Q86VQ3 553 aa29.73■■■□□ 2.35
GCA-201ENST00000233612 CDK19Q9BWU1 502 aa29.73■■■□□ 2.35
GCA-201ENST00000233612 SUPT16HQ9Y5B9 1047 aaKnown RBP29.73■■■□□ 2.35
GCA-201ENST00000233612 EID1Q9Y6B2 187 aa29.73■■■□□ 2.35
GCA-201ENST00000233612 CGNL1Q0VF96 1302 aa29.72■■■□□ 2.35
GCA-201ENST00000233612 ADAMTSL3P82987 1691 aa29.72■■■□□ 2.35
GCA-201ENST00000233612 WAPLQ7Z5K2 1190 aa29.71■■■□□ 2.35
GCA-201ENST00000233612 PLEKHH1Q9ULM0 1364 aa29.7■■■□□ 2.35
GCA-201ENST00000233612 SMG6Q86US8 1419 aaKnown RBP29.69■■■□□ 2.34
GCA-201ENST00000233612 TERF2IPQ9NYB0 399 aa29.67■■■□□ 2.34
GCA-201ENST00000233612 CD163L1Q9NR16 1453 aa29.67■■■□□ 2.34
GCA-201ENST00000233612 RIMS1Q86UR5 1692 aaKnown RBP29.67■■■□□ 2.34
GCA-201ENST00000233612 TBX22Q9Y458 520 aa29.66■■■□□ 2.34
GCA-201ENST00000233612 A0A1W2PP64 1363 aa29.66■■■□□ 2.34
GCA-201ENST00000233612 POLR3AO14802 1390 aaPredicted RBP29.66■■■□□ 2.34
GCA-201ENST00000233612 BCANQ96GW7 911 aa29.65■■■□□ 2.34
GCA-201ENST00000233612 MORC1Q86VD1 984 aa29.64■■■□□ 2.34
GCA-201ENST00000233612 WASLO00401 505 aaPredicted RBP29.63■■■□□ 2.33
GCA-201ENST00000233612 DIP2AQ14689 1571 aa29.63■■■□□ 2.33
GCA-201ENST00000233612 CEP170BQ9Y4F5 1589 aaPredicted RBP29.63■■■□□ 2.33
GCA-201ENST00000233612 NEFLP07196 543 aa29.63■■■□□ 2.33
GCA-201ENST00000233612 ADAMTS8Q9UP79 889 aa29.63■■■□□ 2.33
GCA-201ENST00000233612 PDE3BQ13370 1112 aa29.62■■■□□ 2.33
GCA-201ENST00000233612 NUDCQ9Y266 331 aa29.61■■■□□ 2.33
GCA-201ENST00000233612 ATP7BP35670 1465 aa29.6■■■□□ 2.33
GCA-201ENST00000233612 SETD1BQ9UPS6 1966 aaKnown RBP29.6■■■□□ 2.33
GCA-201ENST00000233612 WDR43Q15061 677 aaKnown RBP eCLIP29.6■■■□□ 2.33
GCA-201ENST00000233612 HDGFL2Q7Z4V5 671 aaPredicted RBP29.59■■■□□ 2.33
GCA-201ENST00000233612 FKBP8Q14318 412 aa29.58■■■□□ 2.33
GCA-201ENST00000233612 ROBO2Q9HCK4 1378 aa29.57■■■□□ 2.32
GCA-201ENST00000233612 CABP1Q9NZU7 370 aa29.57■■■□□ 2.32
GCA-201ENST00000233612 ADGRB2O60241 1585 aa29.57■■■□□ 2.32
GCA-201ENST00000233612 ZNF142P52746 1687 aaPredicted RBP29.57■■■□□ 2.32
GCA-201ENST00000233612 PTPRUQ92729 1446 aa29.55■■■□□ 2.32
GCA-201ENST00000233612 ANKRD26Q9UPS8 1709 aa29.55■■■□□ 2.32
GCA-201ENST00000233612 PLPPR3Q6T4P5 718 aa29.54■■■□□ 2.32
GCA-201ENST00000233612 PIK3R4Q99570 1358 aa29.52■■■□□ 2.32
GCA-201ENST00000233612 CPSF1Q10570 1443 aaKnown RBP29.52■■■□□ 2.32
GCA-201ENST00000233612 FYB1O15117 783 aa29.51■■■□□ 2.31
GCA-201ENST00000233612 SLC26A8Q96RN1 970 aa29.51■■■□□ 2.31
GCA-201ENST00000233612 PTCH1Q13635 1447 aa29.51■■■□□ 2.31
GCA-201ENST00000233612 ERICH6BQ5W0A0 696 aa29.5■■■□□ 2.31
GCA-201ENST00000233612 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.5■■■□□ 2.31
GCA-201ENST00000233612 CCDC61Q9Y6R9 512 aa29.5■■■□□ 2.31
GCA-201ENST00000233612 NUDT16Q96DE0 195 aaKnown RBP29.49■■■□□ 2.31
GCA-201ENST00000233612 AMOTL2Q9Y2J4 779 aa29.47■■■□□ 2.31
GCA-201ENST00000233612 PPIP5K1Q6PFW1 1433 aa29.47■■■□□ 2.31
GCA-201ENST00000233612 RNF123Q5XPI4 1314 aa29.46■■■□□ 2.31
GCA-201ENST00000233612 NGEFQ8N5V2 710 aa29.46■■■□□ 2.31
GCA-201ENST00000233612 KIF20BQ96Q89 1820 aa29.46■■■□□ 2.31
GCA-201ENST00000233612 SHPRHQ149N8 1683 aa29.45■■■□□ 2.31
GCA-201ENST00000233612 MTHFSP49914 203 aa29.44■■■□□ 2.3
GCA-201ENST00000233612 CDC42BPGQ6DT37 1551 aa29.44■■■□□ 2.3
GCA-201ENST00000233612 XRN1Q8IZH2 1706 aaKnown RBP29.44■■■□□ 2.3
GCA-201ENST00000233612 CFAP53Q96M91 514 aa29.43■■■□□ 2.3
GCA-201ENST00000233612 EDC4Q6P2E9 1401 aaKnown RBP29.42■■■□□ 2.3
GCA-201ENST00000233612 ANKLE2Q86XL3 938 aa29.42■■■□□ 2.3
GCA-201ENST00000233612 ZNF692Q9BU19 519 aaPredicted RBP29.41■■■□□ 2.3
GCA-201ENST00000233612 GGNBP2Q9H3C7 697 aa29.41■■■□□ 2.3
GCA-201ENST00000233612 ZNF521Q96K83 1311 aa29.4■■■□□ 2.3
GCA-201ENST00000233612 AKAP12Q02952 1782 aa29.4■■■□□ 2.3
GCA-201ENST00000233612 TNNT2P45379 298 aaPredicted RBP29.4■■■□□ 2.3
GCA-201ENST00000233612 MON2Q7Z3U7 1717 aa29.4■■■□□ 2.3
GCA-201ENST00000233612 PRR36Q9H6K5 1346 aa29.39■■■□□ 2.3
GCA-201ENST00000233612 SENP3-EIF4A1A0A087X0R7 540 aa29.38■■■□□ 2.29
GCA-201ENST00000233612 TOPAZ1Q8N9V7 1692 aa29.38■■■□□ 2.29
GCA-201ENST00000233612 PLEKHG3A1L390 1219 aa29.37■■■□□ 2.29
GCA-201ENST00000233612 SALL2Q9Y467 1007 aaPredicted RBP29.36■■■□□ 2.29
GCA-201ENST00000233612 ITSN1Q15811 1721 aa29.34■■■□□ 2.29
GCA-201ENST00000233612 NCBP3Q53F19 620 aaKnown RBP29.33■■■□□ 2.29
GCA-201ENST00000233612 PNPLA6Q8IY17 1366 aa29.33■■■□□ 2.29
GCA-201ENST00000233612 CHD2O14647 1828 aaKnown RBP29.32■■■□□ 2.28
GCA-201ENST00000233612 CDCA7LQ96GN5 454 aa29.31■■■□□ 2.28
GCA-201ENST00000233612 COL3A1P02461 1466 aaPredicted RBP29.31■■■□□ 2.28
GCA-201ENST00000233612 APAF1O14727 1248 aa29.29■■■□□ 2.28
GCA-201ENST00000233612 NCKAP5LQ9HCH0 1330 aa29.28■■■□□ 2.28
GCA-201ENST00000233612 CCDC146Q8IYE0 955 aa29.28■■■□□ 2.28
GCA-201ENST00000233612 RUNDC1Q96C34 613 aa29.28■■■□□ 2.28
GCA-201ENST00000233612 KCNA6P17658 529 aa29.27■■■□□ 2.28
GCA-201ENST00000233612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.27■■■□□ 2.284e-7■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms