RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 IQSEC2Q5JU85 1478 aa17.84■□□□□ 0.45
SCNN1A-201ENST00000228916 ABCA6Q8N139 1617 aa17.84■□□□□ 0.45
SCNN1A-201ENST00000228916 RLBP1P12271 317 aa17.83■□□□□ 0.45
SCNN1A-201ENST00000228916 ADGRF5Q8IZF2 1346 aa17.83■□□□□ 0.44
SCNN1A-201ENST00000228916 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
SCNN1A-201ENST00000228916 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
SCNN1A-201ENST00000228916 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCNN1A-201ENST00000228916 MCM4P33991 863 aa17.81■□□□□ 0.44
SCNN1A-201ENST00000228916 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
SCNN1A-201ENST00000228916 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
SCNN1A-201ENST00000228916 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
SCNN1A-201ENST00000228916 GOLGA6L3A6NEY3 463 aa17.8■□□□□ 0.44
SCNN1A-201ENST00000228916 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
SCNN1A-201ENST00000228916 MYOM2P54296 1465 aa17.8■□□□□ 0.44
SCNN1A-201ENST00000228916 KANK1Q14678 1352 aa17.79■□□□□ 0.44
SCNN1A-201ENST00000228916 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
SCNN1A-201ENST00000228916 UHRF1BP1LA0JNW5 1464 aa17.79■□□□□ 0.44
SCNN1A-201ENST00000228916 MYO3AQ8NEV4 1616 aa17.79■□□□□ 0.44
SCNN1A-201ENST00000228916 KIF3BO15066 747 aa17.79■□□□□ 0.44
SCNN1A-201ENST00000228916 ATP7AQ04656 1500 aa17.79■□□□□ 0.44
SCNN1A-201ENST00000228916 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
SCNN1A-201ENST00000228916 TCP11L2Q8N4U5 519 aa17.77■□□□□ 0.44
SCNN1A-201ENST00000228916 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.44
SCNN1A-201ENST00000228916 MROH1Q8NDA8 1641 aa17.77■□□□□ 0.44
SCNN1A-201ENST00000228916 CCDC27Q2M243 656 aa17.77■□□□□ 0.43
SCNN1A-201ENST00000228916 IFT172Q9UG01 1749 aa17.77■□□□□ 0.43
SCNN1A-201ENST00000228916 CHMP5Q9NZZ3 219 aa17.76■□□□□ 0.43
SCNN1A-201ENST00000228916 MROH2AA6NES4 1674 aa17.76■□□□□ 0.43
SCNN1A-201ENST00000228916 RRP7AQ9Y3A4 280 aaKnown RBP17.76■□□□□ 0.43
SCNN1A-201ENST00000228916 KIF1BO60333 1816 aa17.76■□□□□ 0.43
SCNN1A-201ENST00000228916 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
SCNN1A-201ENST00000228916 CLCN1P35523 988 aa17.74■□□□□ 0.43
SCNN1A-201ENST00000228916 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
SCNN1A-201ENST00000228916 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
SCNN1A-201ENST00000228916 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
SCNN1A-201ENST00000228916 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
SCNN1A-201ENST00000228916 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
SCNN1A-201ENST00000228916 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
SCNN1A-201ENST00000228916 FANCAO15360 1455 aa17.73■□□□□ 0.43
SCNN1A-201ENST00000228916 TNNT2P45379 298 aaPredicted RBP17.73■□□□□ 0.43
SCNN1A-201ENST00000228916 MORC1Q86VD1 984 aa17.73■□□□□ 0.43
SCNN1A-201ENST00000228916 NRXN1Q9ULB1 1477 aa17.72■□□□□ 0.43
SCNN1A-201ENST00000228916 TRAK2O60296 914 aa17.72■□□□□ 0.43
SCNN1A-201ENST00000228916 ABCA9Q8IUA7 1624 aa17.72■□□□□ 0.43
SCNN1A-201ENST00000228916 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
SCNN1A-201ENST00000228916 SPRYD3Q8NCJ5 442 aa17.71■□□□□ 0.43
SCNN1A-201ENST00000228916 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 MRE11P49959 708 aa17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 USP32Q8NFA0 1604 aa17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 ARXQ96QS3 562 aa17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
SCNN1A-201ENST00000228916 PPRC1Q5VV67 1664 aaKnown RBP17.69■□□□□ 0.42
SCNN1A-201ENST00000228916 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
SCNN1A-201ENST00000228916 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
SCNN1A-201ENST00000228916 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
SCNN1A-201ENST00000228916 NOS1P29475 1434 aa17.68■□□□□ 0.42
SCNN1A-201ENST00000228916 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
SCNN1A-201ENST00000228916 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
SCNN1A-201ENST00000228916 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
SCNN1A-201ENST00000228916 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
SCNN1A-201ENST00000228916 CT47B1P0C2W7 299 aaPredicted RBP17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 SETBP1Q9Y6X0 1596 aa17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 DDX11L8A8MPP1 907 aa17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 DDIT3P35638 169 aa17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-201ENST00000228916 MTHFSP49914 203 aa17.66■□□□□ 0.42
SCNN1A-201ENST00000228916 QRICH2Q9H0J4 1663 aa17.66■□□□□ 0.42
SCNN1A-201ENST00000228916 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
SCNN1A-201ENST00000228916 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
SCNN1A-201ENST00000228916 ADGRB3O60242 1522 aa17.65■□□□□ 0.42
SCNN1A-201ENST00000228916 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
SCNN1A-201ENST00000228916 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
SCNN1A-201ENST00000228916 GRPEL1Q9HAV7 217 aa17.64■□□□□ 0.41
SCNN1A-201ENST00000228916 NAP1L5Q96NT1 182 aaPredicted RBP17.64■□□□□ 0.41
SCNN1A-201ENST00000228916 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
SCNN1A-201ENST00000228916 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
SCNN1A-201ENST00000228916 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
SCNN1A-201ENST00000228916 RBM25P49756 843 aaKnown RBP17.62■□□□□ 0.41
SCNN1A-201ENST00000228916 SNX21Q969T3 373 aa17.62■□□□□ 0.41
SCNN1A-201ENST00000228916 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
SCNN1A-201ENST00000228916 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
SCNN1A-201ENST00000228916 TRIM27P14373 513 aa17.62■□□□□ 0.41
SCNN1A-201ENST00000228916 CFAP65Q6ZU64 1925 aaKnown RBP17.61■□□□□ 0.41
SCNN1A-201ENST00000228916 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
SCNN1A-201ENST00000228916 PPLO60437 1756 aa17.61■□□□□ 0.41
SCNN1A-201ENST00000228916 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
SCNN1A-201ENST00000228916 SMC4Q9NTJ3 1288 aa17.6■□□□□ 0.41
SCNN1A-201ENST00000228916 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
SCNN1A-201ENST00000228916 ESPNB1AK53 854 aa17.58■□□□□ 0.41
SCNN1A-201ENST00000228916 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.41
SCNN1A-201ENST00000228916 NSD2O96028 1365 aa17.58■□□□□ 0.41
SCNN1A-201ENST00000228916 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-201ENST00000228916 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
SCNN1A-201ENST00000228916 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms