RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
HDAC5-201ENST00000225983 NLRP6P59044 892 aa19.69■□□□□ 0.74
HDAC5-201ENST00000225983 PES1O00541 588 aaKnown RBP19.68■□□□□ 0.74
HDAC5-201ENST00000225983 HSP90AA2PQ14568 343 aaPredicted RBP19.68■□□□□ 0.74
HDAC5-201ENST00000225983 NOC3LQ8WTT2 800 aaKnown RBP19.68■□□□□ 0.74
HDAC5-201ENST00000225983 APPP05067 770 aa19.68■□□□□ 0.74
HDAC5-201ENST00000225983 NUCB2P80303 420 aa19.68■□□□□ 0.74
HDAC5-201ENST00000225983 UBTFL1P0CB47 393 aaPredicted RBP19.67■□□□□ 0.74
HDAC5-201ENST00000225983 NOB1Q9ULX3 412 aaKnown RBP19.67■□□□□ 0.74
HDAC5-201ENST00000225983 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
HDAC5-201ENST00000225983 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
HDAC5-201ENST00000225983 AKAP17AQ02040 695 aaKnown RBP19.66■□□□□ 0.74
HDAC5-201ENST00000225983 SYTL4Q96C24 671 aaPredicted RBP19.66■□□□□ 0.74
HDAC5-201ENST00000225983 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
HDAC5-201ENST00000225983 RNF20Q5VTR2 975 aa19.66■□□□□ 0.74
HDAC5-201ENST00000225983 BICD2Q8TD16 824 aa19.66■□□□□ 0.74
HDAC5-201ENST00000225983 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
HDAC5-201ENST00000225983 FOSBP53539 338 aa19.66■□□□□ 0.74
HDAC5-201ENST00000225983 SYNE3Q6ZMZ3 975 aa19.66■□□□□ 0.74
HDAC5-201ENST00000225983 MARCH6O60337 910 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 PDE3AQ14432 1141 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 LRRFIP1Q32MZ4 808 aaKnown RBP19.65■□□□□ 0.74
HDAC5-201ENST00000225983 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
HDAC5-201ENST00000225983 CHMP4CQ96CF2 233 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
HDAC5-201ENST00000225983 NAIPQ13075 1403 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 TPD52L1Q16890 204 aaPredicted RBP19.65■□□□□ 0.74
HDAC5-201ENST00000225983 RIC3Q7Z5B4 369 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 CPLX1O14810 134 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 HSP90AB4PQ58FF6 505 aa19.65■□□□□ 0.74
HDAC5-201ENST00000225983 ERC2O15083 957 aa19.64■□□□□ 0.73
HDAC5-201ENST00000225983 RAPGEF4Q8WZA2 1011 aa19.64■□□□□ 0.73
HDAC5-201ENST00000225983 SMG6Q86US8 1419 aaKnown RBP19.64■□□□□ 0.73
HDAC5-201ENST00000225983 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
HDAC5-201ENST00000225983 TPM3P06753 285 aa19.63■□□□□ 0.73
HDAC5-201ENST00000225983 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
HDAC5-201ENST00000225983 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
HDAC5-201ENST00000225983 MRC2Q9UBG0 1479 aa19.63■□□□□ 0.73
HDAC5-201ENST00000225983 CPLX2Q6PUV4 134 aaKnown RBP19.63■□□□□ 0.73
HDAC5-201ENST00000225983 TXNDC2Q86VQ3 553 aa19.63■□□□□ 0.73
HDAC5-201ENST00000225983 NLRP2Q9NX02 1062 aa19.62■□□□□ 0.73
HDAC5-201ENST00000225983 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
HDAC5-201ENST00000225983 ZNF592Q92610 1267 aa19.62■□□□□ 0.73
HDAC5-201ENST00000225983 NEUROD6Q96NK8 337 aa19.62■□□□□ 0.73
HDAC5-201ENST00000225983 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
HDAC5-201ENST00000225983 PDE4CQ08493 712 aa19.61■□□□□ 0.73
HDAC5-201ENST00000225983 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
HDAC5-201ENST00000225983 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
HDAC5-201ENST00000225983 TRIM29Q14134 588 aa19.61■□□□□ 0.73
HDAC5-201ENST00000225983 BACH2Q9BYV9 841 aa19.61■□□□□ 0.73
HDAC5-201ENST00000225983 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
HDAC5-201ENST00000225983 SURF6O75683 361 aaKnown RBP19.6■□□□□ 0.73
HDAC5-201ENST00000225983 CCAR2Q8N163 923 aaKnown RBP19.59■□□□□ 0.73
HDAC5-201ENST00000225983 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
HDAC5-201ENST00000225983 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
HDAC5-201ENST00000225983 TRDNQ13061 729 aa19.59■□□□□ 0.73
HDAC5-201ENST00000225983 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
HDAC5-201ENST00000225983 EPRSP07814 1512 aaKnown RBP19.58■□□□□ 0.73
HDAC5-201ENST00000225983 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
HDAC5-201ENST00000225983 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.72
HDAC5-201ENST00000225983 TRAK2O60296 914 aa19.57■□□□□ 0.72
HDAC5-201ENST00000225983 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
HDAC5-201ENST00000225983 GOLGA6L1Q8N7Z2 621 aa19.57■□□□□ 0.72
HDAC5-201ENST00000225983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.725e-6■■■□□ 14.8
HDAC5-201ENST00000225983 GNAI3P08754 354 aa19.57■□□□□ 0.72
HDAC5-201ENST00000225983 NFXL1Q6ZNB6 911 aa19.57■□□□□ 0.72
HDAC5-201ENST00000225983 GAS2L2Q8NHY3 880 aa19.57■□□□□ 0.72
HDAC5-201ENST00000225983 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
HDAC5-201ENST00000225983 SLC4A2P04920 1241 aa19.56■□□□□ 0.72
HDAC5-201ENST00000225983 PLEKHH2Q8IVE3 1493 aa19.56■□□□□ 0.72
HDAC5-201ENST00000225983 NEK4P51957 841 aa19.56■□□□□ 0.72
HDAC5-201ENST00000225983 CNTROBQ8N137 903 aa19.55■□□□□ 0.72
HDAC5-201ENST00000225983 RNF214Q8ND24 703 aa19.55■□□□□ 0.72
HDAC5-201ENST00000225983 GCC1Q96CN9 775 aa19.55■□□□□ 0.72
HDAC5-201ENST00000225983 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
HDAC5-201ENST00000225983 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
HDAC5-201ENST00000225983 FSD1Q9BTV5 496 aa19.55■□□□□ 0.72
HDAC5-201ENST00000225983 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
HDAC5-201ENST00000225983 CLASRPQ8N2M8 674 aaKnown RBP19.54■□□□□ 0.72
HDAC5-201ENST00000225983 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
HDAC5-201ENST00000225983 CCDC27Q2M243 656 aa19.54■□□□□ 0.72
HDAC5-201ENST00000225983 SASS6Q6UVJ0 657 aa19.54■□□□□ 0.72
HDAC5-201ENST00000225983 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
HDAC5-201ENST00000225983 RAD21O60216 631 aa19.53■□□□□ 0.72
HDAC5-201ENST00000225983 ATF3P18847 181 aa19.53■□□□□ 0.72
HDAC5-201ENST00000225983 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
HDAC5-201ENST00000225983 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
HDAC5-201ENST00000225983 MRE11P49959 708 aa19.53■□□□□ 0.72
HDAC5-201ENST00000225983 TSR1Q2NL82 804 aaKnown RBP19.53■□□□□ 0.72
HDAC5-201ENST00000225983 FAM43AQ8N2R8 423 aa19.53■□□□□ 0.72
HDAC5-201ENST00000225983 NASPP49321 788 aaPredicted RBP19.53■□□□□ 0.72
HDAC5-201ENST00000225983 CAVIN1Q6NZI2 390 aaKnown RBP19.53■□□□□ 0.72
HDAC5-201ENST00000225983 ESCO1Q5FWF5 840 aa19.52■□□□□ 0.72
HDAC5-201ENST00000225983 FAM13BQ9NYF5 915 aa19.52■□□□□ 0.72
HDAC5-201ENST00000225983 ZNF428Q96B54 188 aa19.52■□□□□ 0.72
HDAC5-201ENST00000225983 RAPGEF3O95398 923 aa19.51■□□□□ 0.71
HDAC5-201ENST00000225983 GNAI2P04899 355 aa19.51■□□□□ 0.71
HDAC5-201ENST00000225983 BRPF3Q9ULD4 1205 aa19.51■□□□□ 0.71
HDAC5-201ENST00000225983 TPM1P09493 284 aa19.51■□□□□ 0.71
HDAC5-201ENST00000225983 A0A0U1RQG5 324 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms