RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 SIRT1Q96EB6 747 aa28.16■■■□□ 2.1
HOXA6-201ENST00000222728 C19orf44Q9H6X5 657 aa28.12■■■□□ 2.09
HOXA6-201ENST00000222728 UBAP1LF5GYI3 381 aa28.1■■■□□ 2.09
HOXA6-201ENST00000222728 RGPD8O14715 1765 aaPredicted RBP28.09■■■□□ 2.09
HOXA6-201ENST00000222728 MINK1Q8N4C8 1332 aaPredicted RBP28.09■■■□□ 2.09
HOXA6-201ENST00000222728 CDC42BPGQ6DT37 1551 aa28.08■■■□□ 2.09
HOXA6-201ENST00000222728 FMN2Q9NZ56 1722 aa28.07■■■□□ 2.08
HOXA6-201ENST00000222728 ATF3P18847 181 aa28.06■■■□□ 2.08
HOXA6-201ENST00000222728 HIRIP3Q9BW71 556 aaPredicted RBP28.06■■■□□ 2.08
HOXA6-201ENST00000222728 CENPJQ9HC77 1338 aaPredicted RBP28.06■■■□□ 2.08
HOXA6-201ENST00000222728 DCCP43146 1447 aa28.06■■■□□ 2.08
HOXA6-201ENST00000222728 ADGRB2O60241 1585 aa28.06■■■□□ 2.08
HOXA6-201ENST00000222728 EIF3AQ14152 1382 aaKnown RBP28.05■■■□□ 2.08
HOXA6-201ENST00000222728 TOM1O60784 492 aa28.04■■■□□ 2.08
HOXA6-201ENST00000222728 PIP4K2BP78356 416 aa28.02■■■□□ 2.08
HOXA6-201ENST00000222728 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
HOXA6-201ENST00000222728 USP47Q96K76 1375 aa28■■■□□ 2.07
HOXA6-201ENST00000222728 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
HOXA6-201ENST00000222728 MST1RQ04912 1400 aa28■■■□□ 2.07
HOXA6-201ENST00000222728 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
HOXA6-201ENST00000222728 ROBO1Q9Y6N7 1651 aa27.99■■■□□ 2.07
HOXA6-201ENST00000222728 SLAIN2Q9P270 581 aa27.98■■■□□ 2.07
HOXA6-201ENST00000222728 USP32Q8NFA0 1604 aa27.96■■■□□ 2.07
HOXA6-201ENST00000222728 FBXO41Q8TF61 875 aa27.95■■■□□ 2.06
HOXA6-201ENST00000222728 TULP4Q9NRJ4 1543 aa27.94■■■□□ 2.06
HOXA6-201ENST00000222728 ST20-MTHFSA0A0A6YYL1 179 aa27.94■■■□□ 2.06
HOXA6-201ENST00000222728 WASLO00401 505 aaPredicted RBP27.93■■■□□ 2.06
HOXA6-201ENST00000222728 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
HOXA6-201ENST00000222728 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
HOXA6-201ENST00000222728 ITSN1Q15811 1721 aa27.89■■■□□ 2.06
HOXA6-201ENST00000222728 SBNO2Q9Y2G9 1366 aa27.87■■■□□ 2.05
HOXA6-201ENST00000222728 ORAI2Q96SN7 254 aa27.87■■■□□ 2.05
HOXA6-201ENST00000222728 TESK2Q96S53 571 aa27.86■■■□□ 2.05
HOXA6-201ENST00000222728 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
HOXA6-201ENST00000222728 PRR36Q9H6K5 1346 aa27.86■■■□□ 2.05
HOXA6-201ENST00000222728 HSPA5P11021 654 aaKnown RBP27.85■■■□□ 2.05
HOXA6-201ENST00000222728 EIF4G2P78344 907 aaKnown RBP eCLIP27.85■■■□□ 2.05
HOXA6-201ENST00000222728 SRPK2P78362 688 aaKnown RBP27.85■■■□□ 2.05
HOXA6-201ENST00000222728 BRINP3Q76B58 766 aa27.85■■■□□ 2.05
HOXA6-201ENST00000222728 CABP2Q9NPB3 220 aa27.85■■■□□ 2.05
HOXA6-201ENST00000222728 EVC2Q86UK5 1308 aa27.85■■■□□ 2.05
HOXA6-201ENST00000222728 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 ATP7BP35670 1465 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 ESCO1Q5FWF5 840 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 NHSL1Q5SYE7 1610 aa27.83■■■□□ 2.05
HOXA6-201ENST00000222728 KIF1AQ12756 1690 aa27.83■■■□□ 2.05
HOXA6-201ENST00000222728 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
HOXA6-201ENST00000222728 NUDT16Q96DE0 195 aaKnown RBP27.81■■■□□ 2.04
HOXA6-201ENST00000222728 DDX17Q92841 729 aaKnown RBP27.79■■■□□ 2.04
HOXA6-201ENST00000222728 DISP3Q9P2K9 1392 aa27.78■■■□□ 2.04
HOXA6-201ENST00000222728 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
HOXA6-201ENST00000222728 AHDC1Q5TGY3 1603 aaPredicted RBP27.77■■■□□ 2.04
HOXA6-201ENST00000222728 PMFBP1Q8TBY8 1022 aa27.76■■■□□ 2.03
HOXA6-201ENST00000222728 PHF8Q9UPP1 1060 aa27.75■■■□□ 2.03
HOXA6-201ENST00000222728 HSPA1LP34931 641 aa27.74■■■□□ 2.03
HOXA6-201ENST00000222728 TMF1P82094 1093 aa27.73■■■□□ 2.03
HOXA6-201ENST00000222728 COL16A1Q07092 1604 aaPredicted RBP27.73■■■□□ 2.03
HOXA6-201ENST00000222728 FOXO3O43524 673 aa27.72■■■□□ 2.03
HOXA6-201ENST00000222728 PPIP5K1Q6PFW1 1433 aa27.72■■■□□ 2.03
HOXA6-201ENST00000222728 CCDC61Q9Y6R9 512 aa27.71■■■□□ 2.03
HOXA6-201ENST00000222728 XPCQ01831 940 aaPredicted RBP27.7■■■□□ 2.02
HOXA6-201ENST00000222728 AKAP12Q02952 1782 aa27.69■■■□□ 2.02
HOXA6-201ENST00000222728 SLC24A1O60721 1099 aa27.68■■■□□ 2.02
HOXA6-201ENST00000222728 ATAD2Q6PL18 1390 aa27.68■■■□□ 2.02
HOXA6-201ENST00000222728 CABP1Q9NZU7 370 aa27.67■■■□□ 2.02
HOXA6-201ENST00000222728 MYOM1P52179 1685 aa27.66■■■□□ 2.02
HOXA6-201ENST00000222728 PXDNQ92626 1479 aa27.66■■■□□ 2.02
HOXA6-201ENST00000222728 NGDNQ8NEJ9 315 aaKnown RBP27.66■■■□□ 2.02
HOXA6-201ENST00000222728 NPHP3Q7Z494 1330 aa27.66■■■□□ 2.02
HOXA6-201ENST00000222728 TRPM3Q9HCF6 1732 aaPredicted RBP27.64■■■□□ 2.02
HOXA6-201ENST00000222728 PLEKHG3A1L390 1219 aa27.64■■■□□ 2.02
HOXA6-201ENST00000222728 ACEP12821 1306 aa27.64■■■□□ 2.01
HOXA6-201ENST00000222728 TMC1Q8TDI8 760 aa27.63■■■□□ 2.01
HOXA6-201ENST00000222728 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
HOXA6-201ENST00000222728 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
HOXA6-201ENST00000222728 PSME1Q06323 249 aa27.62■■■□□ 2.01
HOXA6-201ENST00000222728 PUS7Q96PZ0 661 aaKnown RBP27.62■■■□□ 2.01
HOXA6-201ENST00000222728 KRT28Q7Z3Y7 464 aa27.61■■■□□ 2.01
HOXA6-201ENST00000222728 SOS2Q07890 1332 aaPredicted RBP27.61■■■□□ 2.01
HOXA6-201ENST00000222728 POLR3AO14802 1390 aaPredicted RBP27.6■■■□□ 2.01
HOXA6-201ENST00000222728 CDCA8Q53HL2 280 aa27.6■■■□□ 2.01
HOXA6-201ENST00000222728 SLC12A5Q9H2X9 1139 aa27.6■■■□□ 2.01
HOXA6-201ENST00000222728 MON2Q7Z3U7 1717 aa27.6■■■□□ 2.01
HOXA6-201ENST00000222728 SHPRHQ149N8 1683 aa27.57■■■□□ 2
HOXA6-201ENST00000222728 CD163L1Q9NR16 1453 aa27.56■■■□□ 2
HOXA6-201ENST00000222728 ALS2Q96Q42 1657 aa27.56■■■□□ 2
HOXA6-201ENST00000222728 NRKQ7Z2Y5 1582 aa27.53■■■□□ 2
HOXA6-201ENST00000222728 LRRC59Q96AG4 307 aaKnown RBP27.53■■■□□ 2
HOXA6-201ENST00000222728 USP6P35125 1406 aa27.52■■■□□ 2
HOXA6-201ENST00000222728 CPSF1Q10570 1443 aaKnown RBP27.52■■■□□ 2
HOXA6-201ENST00000222728 NINLQ9Y2I6 1382 aa27.52■■■□□ 2
HOXA6-201ENST00000222728 KIF7Q2M1P5 1343 aa27.52■■■□□ 2
HOXA6-201ENST00000222728 PAK3O75914 559 aaPredicted RBP27.51■■□□□ 1.99
HOXA6-201ENST00000222728 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 A0A1W2PP64 1363 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 SBNO1A3KN83 1393 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 KTN1Q86UP2 1357 aaKnown RBP27.5■■□□□ 1.99
HOXA6-201ENST00000222728 JCADQ9P266 1359 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 SPATA31A3Q5VYP0 1347 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms