RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 SIRT1Q96EB6 747 aa28.16■■■□□ 2.1
HOXA6-201ENST00000222728 C19orf44Q9H6X5 657 aa28.12■■■□□ 2.09
HOXA6-201ENST00000222728 UBAP1LF5GYI3 381 aa28.1■■■□□ 2.09
HOXA6-201ENST00000222728 RGPD8O14715 1765 aaPredicted RBP28.09■■■□□ 2.09
HOXA6-201ENST00000222728 MINK1Q8N4C8 1332 aaPredicted RBP28.09■■■□□ 2.09
HOXA6-201ENST00000222728 CDC42BPGQ6DT37 1551 aa28.08■■■□□ 2.09
HOXA6-201ENST00000222728 FMN2Q9NZ56 1722 aa28.07■■■□□ 2.08
HOXA6-201ENST00000222728 ATF3P18847 181 aa28.06■■■□□ 2.08
HOXA6-201ENST00000222728 HIRIP3Q9BW71 556 aaPredicted RBP28.06■■■□□ 2.08
HOXA6-201ENST00000222728 CENPJQ9HC77 1338 aaPredicted RBP28.06■■■□□ 2.08
HOXA6-201ENST00000222728 DCCP43146 1447 aa28.06■■■□□ 2.08
HOXA6-201ENST00000222728 ADGRB2O60241 1585 aa28.06■■■□□ 2.08
HOXA6-201ENST00000222728 EIF3AQ14152 1382 aaKnown RBP28.05■■■□□ 2.08
HOXA6-201ENST00000222728 TOM1O60784 492 aa28.04■■■□□ 2.08
HOXA6-201ENST00000222728 PIP4K2BP78356 416 aa28.02■■■□□ 2.08
HOXA6-201ENST00000222728 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
HOXA6-201ENST00000222728 USP47Q96K76 1375 aa28■■■□□ 2.07
HOXA6-201ENST00000222728 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
HOXA6-201ENST00000222728 MST1RQ04912 1400 aa28■■■□□ 2.07
HOXA6-201ENST00000222728 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
HOXA6-201ENST00000222728 ROBO1Q9Y6N7 1651 aa27.99■■■□□ 2.07
HOXA6-201ENST00000222728 SLAIN2Q9P270 581 aa27.98■■■□□ 2.07
HOXA6-201ENST00000222728 USP32Q8NFA0 1604 aa27.96■■■□□ 2.07
HOXA6-201ENST00000222728 FBXO41Q8TF61 875 aa27.95■■■□□ 2.06
HOXA6-201ENST00000222728 TULP4Q9NRJ4 1543 aa27.94■■■□□ 2.06
HOXA6-201ENST00000222728 ST20-MTHFSA0A0A6YYL1 179 aa27.94■■■□□ 2.06
HOXA6-201ENST00000222728 WASLO00401 505 aaPredicted RBP27.93■■■□□ 2.06
HOXA6-201ENST00000222728 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
HOXA6-201ENST00000222728 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
HOXA6-201ENST00000222728 ITSN1Q15811 1721 aa27.89■■■□□ 2.06
HOXA6-201ENST00000222728 SBNO2Q9Y2G9 1366 aa27.87■■■□□ 2.05
HOXA6-201ENST00000222728 ORAI2Q96SN7 254 aa27.87■■■□□ 2.05
HOXA6-201ENST00000222728 TESK2Q96S53 571 aa27.86■■■□□ 2.05
HOXA6-201ENST00000222728 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
HOXA6-201ENST00000222728 PRR36Q9H6K5 1346 aa27.86■■■□□ 2.05
HOXA6-201ENST00000222728 HSPA5P11021 654 aaKnown RBP27.85■■■□□ 2.05
HOXA6-201ENST00000222728 EIF4G2P78344 907 aaKnown RBP eCLIP27.85■■■□□ 2.05
HOXA6-201ENST00000222728 SRPK2P78362 688 aaKnown RBP27.85■■■□□ 2.05
HOXA6-201ENST00000222728 BRINP3Q76B58 766 aa27.85■■■□□ 2.05
HOXA6-201ENST00000222728 CABP2Q9NPB3 220 aa27.85■■■□□ 2.05
HOXA6-201ENST00000222728 EVC2Q86UK5 1308 aa27.85■■■□□ 2.05
HOXA6-201ENST00000222728 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 ATP7BP35670 1465 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 ESCO1Q5FWF5 840 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
HOXA6-201ENST00000222728 NHSL1Q5SYE7 1610 aa27.83■■■□□ 2.05
HOXA6-201ENST00000222728 KIF1AQ12756 1690 aa27.83■■■□□ 2.05
HOXA6-201ENST00000222728 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
HOXA6-201ENST00000222728 NUDT16Q96DE0 195 aaKnown RBP27.81■■■□□ 2.04
HOXA6-201ENST00000222728 DDX17Q92841 729 aaKnown RBP27.79■■■□□ 2.04
HOXA6-201ENST00000222728 DISP3Q9P2K9 1392 aa27.78■■■□□ 2.04
HOXA6-201ENST00000222728 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
HOXA6-201ENST00000222728 AHDC1Q5TGY3 1603 aaPredicted RBP27.77■■■□□ 2.04
HOXA6-201ENST00000222728 PMFBP1Q8TBY8 1022 aa27.76■■■□□ 2.03
HOXA6-201ENST00000222728 PHF8Q9UPP1 1060 aa27.75■■■□□ 2.03
HOXA6-201ENST00000222728 HSPA1LP34931 641 aa27.74■■■□□ 2.03
HOXA6-201ENST00000222728 TMF1P82094 1093 aa27.73■■■□□ 2.03
HOXA6-201ENST00000222728 COL16A1Q07092 1604 aaPredicted RBP27.73■■■□□ 2.03
HOXA6-201ENST00000222728 FOXO3O43524 673 aa27.72■■■□□ 2.03
HOXA6-201ENST00000222728 PPIP5K1Q6PFW1 1433 aa27.72■■■□□ 2.03
HOXA6-201ENST00000222728 CCDC61Q9Y6R9 512 aa27.71■■■□□ 2.03
HOXA6-201ENST00000222728 XPCQ01831 940 aaPredicted RBP27.7■■■□□ 2.02
HOXA6-201ENST00000222728 AKAP12Q02952 1782 aa27.69■■■□□ 2.02
HOXA6-201ENST00000222728 SLC24A1O60721 1099 aa27.68■■■□□ 2.02
HOXA6-201ENST00000222728 ATAD2Q6PL18 1390 aa27.68■■■□□ 2.02
HOXA6-201ENST00000222728 CABP1Q9NZU7 370 aa27.67■■■□□ 2.02
HOXA6-201ENST00000222728 MYOM1P52179 1685 aa27.66■■■□□ 2.02
HOXA6-201ENST00000222728 PXDNQ92626 1479 aa27.66■■■□□ 2.02
HOXA6-201ENST00000222728 NGDNQ8NEJ9 315 aaKnown RBP27.66■■■□□ 2.02
HOXA6-201ENST00000222728 NPHP3Q7Z494 1330 aa27.66■■■□□ 2.02
HOXA6-201ENST00000222728 TRPM3Q9HCF6 1732 aaPredicted RBP27.64■■■□□ 2.02
HOXA6-201ENST00000222728 PLEKHG3A1L390 1219 aa27.64■■■□□ 2.02
HOXA6-201ENST00000222728 ACEP12821 1306 aa27.64■■■□□ 2.01
HOXA6-201ENST00000222728 TMC1Q8TDI8 760 aa27.63■■■□□ 2.01
HOXA6-201ENST00000222728 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
HOXA6-201ENST00000222728 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
HOXA6-201ENST00000222728 PSME1Q06323 249 aa27.62■■■□□ 2.01
HOXA6-201ENST00000222728 PUS7Q96PZ0 661 aaKnown RBP27.62■■■□□ 2.01
HOXA6-201ENST00000222728 KRT28Q7Z3Y7 464 aa27.61■■■□□ 2.01
HOXA6-201ENST00000222728 SOS2Q07890 1332 aaPredicted RBP27.61■■■□□ 2.01
HOXA6-201ENST00000222728 POLR3AO14802 1390 aaPredicted RBP27.6■■■□□ 2.01
HOXA6-201ENST00000222728 CDCA8Q53HL2 280 aa27.6■■■□□ 2.01
HOXA6-201ENST00000222728 SLC12A5Q9H2X9 1139 aa27.6■■■□□ 2.01
HOXA6-201ENST00000222728 MON2Q7Z3U7 1717 aa27.6■■■□□ 2.01
HOXA6-201ENST00000222728 SHPRHQ149N8 1683 aa27.57■■■□□ 2
HOXA6-201ENST00000222728 CD163L1Q9NR16 1453 aa27.56■■■□□ 2
HOXA6-201ENST00000222728 ALS2Q96Q42 1657 aa27.56■■■□□ 2
HOXA6-201ENST00000222728 NRKQ7Z2Y5 1582 aa27.53■■■□□ 2
HOXA6-201ENST00000222728 LRRC59Q96AG4 307 aaKnown RBP27.53■■■□□ 2
HOXA6-201ENST00000222728 USP6P35125 1406 aa27.52■■■□□ 2
HOXA6-201ENST00000222728 CPSF1Q10570 1443 aaKnown RBP27.52■■■□□ 2
HOXA6-201ENST00000222728 NINLQ9Y2I6 1382 aa27.52■■■□□ 2
HOXA6-201ENST00000222728 KIF7Q2M1P5 1343 aa27.52■■■□□ 2
HOXA6-201ENST00000222728 PAK3O75914 559 aaPredicted RBP27.51■■□□□ 1.99
HOXA6-201ENST00000222728 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 A0A1W2PP64 1363 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 SBNO1A3KN83 1393 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 KTN1Q86UP2 1357 aaKnown RBP27.5■■□□□ 1.99
HOXA6-201ENST00000222728 JCADQ9P266 1359 aa27.5■■□□□ 1.99
HOXA6-201ENST00000222728 SPATA31A3Q5VYP0 1347 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms