RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CRBNQ96SW2 442 aa20.78■□□□□ 0.92
SF3A2-201ENST00000221494 LAS1LQ9Y4W2 734 aaKnown RBP20.77■□□□□ 0.92
SF3A2-201ENST00000221494 IQGAP1P46940 1657 aa20.77■□□□□ 0.91
SF3A2-201ENST00000221494 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
SF3A2-201ENST00000221494 CDCA7LQ96GN5 454 aa20.76■□□□□ 0.91
SF3A2-201ENST00000221494 TMF1P82094 1093 aa20.76■□□□□ 0.91
SF3A2-201ENST00000221494 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
SF3A2-201ENST00000221494 SETBP1Q9Y6X0 1596 aa20.75■□□□□ 0.91
SF3A2-201ENST00000221494 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
SF3A2-201ENST00000221494 ADGRB1O14514 1584 aa20.75■□□□□ 0.91
SF3A2-201ENST00000221494 TMEM132EQ6IEE7 984 aa20.74■□□□□ 0.91
SF3A2-201ENST00000221494 GSE1Q14687 1217 aa20.74■□□□□ 0.91
SF3A2-201ENST00000221494 FAM161AQ3B820 660 aa20.73■□□□□ 0.91
SF3A2-201ENST00000221494 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
SF3A2-201ENST00000221494 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
SF3A2-201ENST00000221494 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
SF3A2-201ENST00000221494 ZNF521Q96K83 1311 aa20.7■□□□□ 0.91
SF3A2-201ENST00000221494 PANK3Q9H999 370 aa20.7■□□□□ 0.9
SF3A2-201ENST00000221494 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
SF3A2-201ENST00000221494 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
SF3A2-201ENST00000221494 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
SF3A2-201ENST00000221494 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
SF3A2-201ENST00000221494 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
SF3A2-201ENST00000221494 PODXL2Q9NZ53 605 aa20.68■□□□□ 0.9
SF3A2-201ENST00000221494 FER1L4A9Z1Z3 1794 aa20.68■□□□□ 0.9
SF3A2-201ENST00000221494 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
SF3A2-201ENST00000221494 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
SF3A2-201ENST00000221494 SALL2Q9Y467 1007 aaPredicted RBP20.67■□□□□ 0.9
SF3A2-201ENST00000221494 C3P01024 1663 aa20.67■□□□□ 0.9
SF3A2-201ENST00000221494 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
SF3A2-201ENST00000221494 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
SF3A2-201ENST00000221494 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
SF3A2-201ENST00000221494 PLIN1O60240 522 aa20.66■□□□□ 0.9
SF3A2-201ENST00000221494 TMEM2Q9UHN6 1383 aa20.65■□□□□ 0.9
SF3A2-201ENST00000221494 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
SF3A2-201ENST00000221494 CC2D1BQ5T0F9 858 aaKnown RBP20.65■□□□□ 0.9
SF3A2-201ENST00000221494 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
SF3A2-201ENST00000221494 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
SF3A2-201ENST00000221494 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.9
SF3A2-201ENST00000221494 SBNO2Q9Y2G9 1366 aa20.64■□□□□ 0.89
SF3A2-201ENST00000221494 HDGFP51858 240 aaKnown RBP20.64■□□□□ 0.89
SF3A2-201ENST00000221494 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
SF3A2-201ENST00000221494 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
SF3A2-201ENST00000221494 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
SF3A2-201ENST00000221494 WDR43Q15061 677 aaKnown RBP eCLIP20.63■□□□□ 0.89
SF3A2-201ENST00000221494 PLEKHH1Q9ULM0 1364 aa20.62■□□□□ 0.89
SF3A2-201ENST00000221494 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
SF3A2-201ENST00000221494 TRMT2AQ8IZ69 625 aaKnown RBP20.61■□□□□ 0.89
SF3A2-201ENST00000221494 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
SF3A2-201ENST00000221494 ANO8Q9HCE9 1232 aaPredicted RBP20.61■□□□□ 0.89
SF3A2-201ENST00000221494 MYO3AQ8NEV4 1616 aa20.61■□□□□ 0.89
SF3A2-201ENST00000221494 MYOM1P52179 1685 aa20.6■□□□□ 0.89
SF3A2-201ENST00000221494 UBR1Q8IWV7 1749 aa20.6■□□□□ 0.89
SF3A2-201ENST00000221494 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
SF3A2-201ENST00000221494 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
SF3A2-201ENST00000221494 STK26Q9P289 416 aa20.59■□□□□ 0.89
SF3A2-201ENST00000221494 PTPRMP28827 1452 aa20.59■□□□□ 0.89
SF3A2-201ENST00000221494 ADAMTSL3P82987 1691 aa20.58■□□□□ 0.89
SF3A2-201ENST00000221494 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
SF3A2-201ENST00000221494 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
SF3A2-201ENST00000221494 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.89
SF3A2-201ENST00000221494 LTKP29376 864 aa20.57■□□□□ 0.88
SF3A2-201ENST00000221494 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
SF3A2-201ENST00000221494 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
SF3A2-201ENST00000221494 AAMPQ13685 434 aa20.55■□□□□ 0.88
SF3A2-201ENST00000221494 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
SF3A2-201ENST00000221494 RIMS1Q86UR5 1692 aaKnown RBP20.55■□□□□ 0.88
SF3A2-201ENST00000221494 TXNDC2Q86VQ3 553 aa20.54■□□□□ 0.88
SF3A2-201ENST00000221494 ARHGAP23Q9P227 1491 aa20.54■□□□□ 0.88
SF3A2-201ENST00000221494 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
SF3A2-201ENST00000221494 SLIT1O75093 1534 aa20.53■□□□□ 0.88
SF3A2-201ENST00000221494 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.88
SF3A2-201ENST00000221494 METP08581 1390 aa20.52■□□□□ 0.88
SF3A2-201ENST00000221494 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
SF3A2-201ENST00000221494 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.87
SF3A2-201ENST00000221494 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
SF3A2-201ENST00000221494 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
SF3A2-201ENST00000221494 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
SF3A2-201ENST00000221494 ARHGEF28Q8N1W1 1705 aaKnown RBP20.51■□□□□ 0.87
SF3A2-201ENST00000221494 E9PSI1 815 aa20.5■□□□□ 0.87
SF3A2-201ENST00000221494 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
SF3A2-201ENST00000221494 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
SF3A2-201ENST00000221494 SETD1AO15047 1707 aaKnown RBP20.49■□□□□ 0.87
SF3A2-201ENST00000221494 ADAMTS13Q76LX8 1427 aa20.49■□□□□ 0.87
SF3A2-201ENST00000221494 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
SF3A2-201ENST00000221494 QRICH2Q9H0J4 1663 aa20.49■□□□□ 0.87
SF3A2-201ENST00000221494 PKNOX2Q96KN3 472 aa20.48■□□□□ 0.87
SF3A2-201ENST00000221494 PUS7Q96PZ0 661 aaKnown RBP20.48■□□□□ 0.87
SF3A2-201ENST00000221494 POGKQ9P215 609 aa20.48■□□□□ 0.87
SF3A2-201ENST00000221494 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
SF3A2-201ENST00000221494 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
SF3A2-201ENST00000221494 BRPF3Q9ULD4 1205 aa20.46■□□□□ 0.87
SF3A2-201ENST00000221494 DLC1Q96QB1 1528 aa20.46■□□□□ 0.87
SF3A2-201ENST00000221494 BECN1Q14457 450 aa20.46■□□□□ 0.87
SF3A2-201ENST00000221494 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
SF3A2-201ENST00000221494 ARXQ96QS3 562 aa20.46■□□□□ 0.87
SF3A2-201ENST00000221494 CEP170BQ9Y4F5 1589 aaPredicted RBP20.45■□□□□ 0.87
SF3A2-201ENST00000221494 MED14O60244 1454 aa20.45■□□□□ 0.86
SF3A2-201ENST00000221494 TULP4Q9NRJ4 1543 aa20.45■□□□□ 0.86
SF3A2-201ENST00000221494 RTN4Q9NQC3 1192 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms