RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
CNOT3-201ENST00000221232 KIF1BO60333 1816 aa18.98■□□□□ 0.63
CNOT3-201ENST00000221232 NKTRP30414 1462 aaKnown RBP18.98■□□□□ 0.63
CNOT3-201ENST00000221232 CLUAP1Q96AJ1 413 aa18.97■□□□□ 0.63
CNOT3-201ENST00000221232 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
CNOT3-201ENST00000221232 RUNDC1Q96C34 613 aa18.96■□□□□ 0.63
CNOT3-201ENST00000221232 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
CNOT3-201ENST00000221232 CGNL1Q0VF96 1302 aa18.96■□□□□ 0.63
CNOT3-201ENST00000221232 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
CNOT3-201ENST00000221232 POGZQ7Z3K3 1410 aa18.95■□□□□ 0.62
CNOT3-201ENST00000221232 U2SURPO15042 1029 aaKnown RBP18.95■□□□□ 0.62
CNOT3-201ENST00000221232 NEFMP07197 916 aa18.95■□□□□ 0.62
CNOT3-201ENST00000221232 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
CNOT3-201ENST00000221232 FBXO31Q5XUX0 539 aaPredicted RBP18.94■□□□□ 0.62
CNOT3-201ENST00000221232 POLR3AO14802 1390 aaPredicted RBP18.93■□□□□ 0.62
CNOT3-201ENST00000221232 CFAP53Q96M91 514 aa18.93■□□□□ 0.62
CNOT3-201ENST00000221232 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
CNOT3-201ENST00000221232 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
CNOT3-201ENST00000221232 C8orf34Q49A92 452 aa18.91■□□□□ 0.62
CNOT3-201ENST00000221232 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
CNOT3-201ENST00000221232 KIAA1210Q9ULL0 1709 aa18.91■□□□□ 0.62
CNOT3-201ENST00000221232 ADGRB3O60242 1522 aa18.91■□□□□ 0.62
CNOT3-201ENST00000221232 RPGRIP1LQ68CZ1 1315 aa18.9■□□□□ 0.62
CNOT3-201ENST00000221232 POGKQ9P215 609 aa18.9■□□□□ 0.62
CNOT3-201ENST00000221232 DAXXQ9UER7 740 aaPredicted RBP18.9■□□□□ 0.62
CNOT3-201ENST00000221232 FRMPD1Q5SYB0 1578 aa18.9■□□□□ 0.62
CNOT3-201ENST00000221232 STAG3Q9UJ98 1225 aa18.9■□□□□ 0.62
CNOT3-201ENST00000221232 SBNO2Q9Y2G9 1366 aa18.9■□□□□ 0.62
CNOT3-201ENST00000221232 FBLN1P23142 703 aa18.89■□□□□ 0.61
CNOT3-201ENST00000221232 RLBP1P12271 317 aa18.89■□□□□ 0.61
CNOT3-201ENST00000221232 RARSP54136 660 aaKnown RBP18.89■□□□□ 0.61
CNOT3-201ENST00000221232 PRAM1Q96QH2 718 aa18.89■□□□□ 0.61
CNOT3-201ENST00000221232 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
CNOT3-201ENST00000221232 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
CNOT3-201ENST00000221232 MLH3Q9UHC1 1453 aa18.88■□□□□ 0.61
CNOT3-201ENST00000221232 LMTK2Q8IWU2 1503 aa18.87■□□□□ 0.61
CNOT3-201ENST00000221232 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-201ENST00000221232 MLECQ14165 292 aa18.87■□□□□ 0.61
CNOT3-201ENST00000221232 ABCC3O15438 1527 aa18.86■□□□□ 0.61
CNOT3-201ENST00000221232 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
CNOT3-201ENST00000221232 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
CNOT3-201ENST00000221232 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
CNOT3-201ENST00000221232 DDRGK1Q96HY6 314 aa18.85■□□□□ 0.61
CNOT3-201ENST00000221232 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.61
CNOT3-201ENST00000221232 IFT172Q9UG01 1749 aa18.83■□□□□ 0.61
CNOT3-201ENST00000221232 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
CNOT3-201ENST00000221232 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
CNOT3-201ENST00000221232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.83■□□□□ 0.61e-6■■■□□ 18.3
CNOT3-201ENST00000221232 SEC24BO95487 1268 aa18.82■□□□□ 0.6
CNOT3-201ENST00000221232 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
CNOT3-201ENST00000221232 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
CNOT3-201ENST00000221232 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
CNOT3-201ENST00000221232 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
CNOT3-201ENST00000221232 ANKRD36BQ8N2N9 1353 aa18.81■□□□□ 0.6
CNOT3-201ENST00000221232 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
CNOT3-201ENST00000221232 FYB1O15117 783 aa18.8■□□□□ 0.6
CNOT3-201ENST00000221232 WAPLQ7Z5K2 1190 aa18.8■□□□□ 0.6
CNOT3-201ENST00000221232 SETBP1Q9Y6X0 1596 aa18.8■□□□□ 0.6
CNOT3-201ENST00000221232 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
CNOT3-201ENST00000221232 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
CNOT3-201ENST00000221232 CDK19Q9BWU1 502 aa18.79■□□□□ 0.6
CNOT3-201ENST00000221232 PPLO60437 1756 aa18.79■□□□□ 0.6
CNOT3-201ENST00000221232 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
CNOT3-201ENST00000221232 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
CNOT3-201ENST00000221232 TULP4Q9NRJ4 1543 aa18.78■□□□□ 0.6
CNOT3-201ENST00000221232 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
CNOT3-201ENST00000221232 SIGLEC1Q9BZZ2 1709 aa18.77■□□□□ 0.6
CNOT3-201ENST00000221232 MYO3AQ8NEV4 1616 aa18.77■□□□□ 0.59
CNOT3-201ENST00000221232 GLI2P10070 1586 aa18.77■□□□□ 0.59
CNOT3-201ENST00000221232 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
CNOT3-201ENST00000221232 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
CNOT3-201ENST00000221232 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
CNOT3-201ENST00000221232 TMPOP42166 694 aaKnown RBP18.76■□□□□ 0.59
CNOT3-201ENST00000221232 SMC4Q9NTJ3 1288 aa18.76■□□□□ 0.59
CNOT3-201ENST00000221232 RIPK4P57078 832 aa18.75■□□□□ 0.59
CNOT3-201ENST00000221232 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
CNOT3-201ENST00000221232 NFKBIBQ15653 356 aa18.73■□□□□ 0.59
CNOT3-201ENST00000221232 TRIM35Q9UPQ4 493 aa18.73■□□□□ 0.59
CNOT3-201ENST00000221232 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
CNOT3-201ENST00000221232 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
CNOT3-201ENST00000221232 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
CNOT3-201ENST00000221232 CAMSAP1Q5T5Y3 1602 aa18.72■□□□□ 0.59
CNOT3-201ENST00000221232 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
CNOT3-201ENST00000221232 CCDC27Q2M243 656 aa18.72■□□□□ 0.59
CNOT3-201ENST00000221232 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
CNOT3-201ENST00000221232 ZKSCAN2Q63HK3 967 aa18.71■□□□□ 0.59
CNOT3-201ENST00000221232 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
CNOT3-201ENST00000221232 HMOX1P09601 288 aa18.71■□□□□ 0.59
CNOT3-201ENST00000221232 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
CNOT3-201ENST00000221232 DZIP1LQ8IYY4 767 aaKnown RBP18.71■□□□□ 0.59
CNOT3-201ENST00000221232 PMFBP1Q8TBY8 1022 aa18.71■□□□□ 0.59
CNOT3-201ENST00000221232 PUS7Q96PZ0 661 aaKnown RBP18.7■□□□□ 0.58
CNOT3-201ENST00000221232 DIP2CQ9Y2E4 1556 aa18.7■□□□□ 0.58
CNOT3-201ENST00000221232 IQSEC2Q5JU85 1478 aa18.7■□□□□ 0.58
CNOT3-201ENST00000221232 NEO1Q92859 1461 aa18.7■□□□□ 0.58
CNOT3-201ENST00000221232 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
CNOT3-201ENST00000221232 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
CNOT3-201ENST00000221232 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
CNOT3-201ENST00000221232 ZRANB1Q9UGI0 708 aa18.69■□□□□ 0.58
CNOT3-201ENST00000221232 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms