RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ALKQ9UM73 1620 aa10.59□□□□□ -0.71
HMGXB4-201ENST00000216106 YTHDC2Q9H6S0 1430 aaKnown RBP10.59□□□□□ -0.71
HMGXB4-201ENST00000216106 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
HMGXB4-201ENST00000216106 A2ML1A8K2U0 1454 aa10.58□□□□□ -0.72
HMGXB4-201ENST00000216106 MORC1Q86VD1 984 aa10.58□□□□□ -0.72
HMGXB4-201ENST00000216106 PRAM1Q96QH2 718 aa10.58□□□□□ -0.72
HMGXB4-201ENST00000216106 MINK1Q8N4C8 1332 aaPredicted RBP10.57□□□□□ -0.72
HMGXB4-201ENST00000216106 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
HMGXB4-201ENST00000216106 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
HMGXB4-201ENST00000216106 ANKRD36BQ8N2N9 1353 aa10.57□□□□□ -0.72
HMGXB4-201ENST00000216106 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
HMGXB4-201ENST00000216106 CCDC136Q96JN2 1154 aa10.56□□□□□ -0.72
HMGXB4-201ENST00000216106 POGKQ9P215 609 aa10.56□□□□□ -0.72
HMGXB4-201ENST00000216106 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
HMGXB4-201ENST00000216106 PUS7Q96PZ0 661 aaKnown RBP10.56□□□□□ -0.72
HMGXB4-201ENST00000216106 RIMS2Q9UQ26 1411 aa10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 SHPRHQ149N8 1683 aa10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 POLR3AO14802 1390 aaPredicted RBP10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 APAF1O14727 1248 aa10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 ZNF521Q96K83 1311 aa10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 A0A1W2PP64 1363 aa10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 ZMYM3Q14202 1370 aa10.55□□□□□ -0.72
HMGXB4-201ENST00000216106 SETD1AO15047 1707 aaKnown RBP10.54□□□□□ -0.72
HMGXB4-201ENST00000216106 PLIN1O60240 522 aa10.54□□□□□ -0.72
HMGXB4-201ENST00000216106 EXOC6Q8TAG9 804 aa10.54□□□□□ -0.72
HMGXB4-201ENST00000216106 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
HMGXB4-201ENST00000216106 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
HMGXB4-201ENST00000216106 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.73
HMGXB4-201ENST00000216106 MTHFSP49914 203 aa10.52□□□□□ -0.73
HMGXB4-201ENST00000216106 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
HMGXB4-201ENST00000216106 NRXN3Q9Y4C0 1643 aa10.52□□□□□ -0.73
HMGXB4-201ENST00000216106 NSD2O96028 1365 aa10.51□□□□□ -0.73
HMGXB4-201ENST00000216106 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
HMGXB4-201ENST00000216106 ABCC11Q96J66 1382 aa10.51□□□□□ -0.73
HMGXB4-201ENST00000216106 CDK19Q9BWU1 502 aa10.5□□□□□ -0.73
HMGXB4-201ENST00000216106 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
HMGXB4-201ENST00000216106 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
HMGXB4-201ENST00000216106 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
HMGXB4-201ENST00000216106 GGNBP2Q9H3C7 697 aa10.5□□□□□ -0.73
HMGXB4-201ENST00000216106 DLC1Q96QB1 1528 aa10.5□□□□□ -0.73
HMGXB4-201ENST00000216106 TNRQ92752 1358 aa10.49□□□□□ -0.73
HMGXB4-201ENST00000216106 TERF2IPQ9NYB0 399 aa10.49□□□□□ -0.73
HMGXB4-201ENST00000216106 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
HMGXB4-201ENST00000216106 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
HMGXB4-201ENST00000216106 METP08581 1390 aa10.48□□□□□ -0.73
HMGXB4-201ENST00000216106 ANKRD26Q9UPS8 1709 aa10.48□□□□□ -0.73
HMGXB4-201ENST00000216106 UBR1Q8IWV7 1749 aa10.48□□□□□ -0.73
HMGXB4-201ENST00000216106 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
HMGXB4-201ENST00000216106 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.48□□□□□ -0.73
HMGXB4-201ENST00000216106 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
HMGXB4-201ENST00000216106 C20orf194Q5TEA3 1177 aa10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 CRBNQ96SW2 442 aa10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 RRP7AQ9Y3A4 280 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 HDGFL2Q7Z4V5 671 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 TRMT2AQ8IZ69 625 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 NLRP1Q9C000 1473 aa10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 FYB1O15117 783 aa10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 KIF20BQ96Q89 1820 aa10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 NKTRP30414 1462 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 IQSEC2Q5JU85 1478 aa10.47□□□□□ -0.73
HMGXB4-201ENST00000216106 WWC1Q8IX03 1113 aa10.46□□□□□ -0.73
HMGXB4-201ENST00000216106 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
HMGXB4-201ENST00000216106 E9PSI1 815 aa10.46□□□□□ -0.73
HMGXB4-201ENST00000216106 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.74
HMGXB4-201ENST00000216106 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
HMGXB4-201ENST00000216106 NGEFQ8N5V2 710 aa10.45□□□□□ -0.74
HMGXB4-201ENST00000216106 TMEM2Q9UHN6 1383 aa10.45□□□□□ -0.74
HMGXB4-201ENST00000216106 U2AF1L5P0DN76 240 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-201ENST00000216106 CEBPAP49715 358 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-201ENST00000216106 U2AF1Q01081 240 aaKnown RBP eCLIP10.45□□□□□ -0.74
HMGXB4-201ENST00000216106 KNDC1Q76NI1 1749 aa10.44□□□□□ -0.74
HMGXB4-201ENST00000216106 PLPPR3Q6T4P5 718 aa10.44□□□□□ -0.74
HMGXB4-201ENST00000216106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGXB4-201ENST00000216106 MED14O60244 1454 aa10.44□□□□□ -0.74
HMGXB4-201ENST00000216106 HDGFP51858 240 aaKnown RBP10.44□□□□□ -0.74
HMGXB4-201ENST00000216106 ATP7BP35670 1465 aa10.43□□□□□ -0.74
HMGXB4-201ENST00000216106 WASLO00401 505 aaPredicted RBP10.43□□□□□ -0.74
HMGXB4-201ENST00000216106 U2SURPO15042 1029 aaKnown RBP10.43□□□□□ -0.74
HMGXB4-201ENST00000216106 COL3A1P02461 1466 aaPredicted RBP10.43□□□□□ -0.74
HMGXB4-201ENST00000216106 BCAR3O75815 825 aa10.42□□□□□ -0.74
HMGXB4-201ENST00000216106 PPIP5K1Q6PFW1 1433 aa10.42□□□□□ -0.74
HMGXB4-201ENST00000216106 CPS1P31327 1500 aa10.42□□□□□ -0.74
HMGXB4-201ENST00000216106 C3P01024 1663 aa10.42□□□□□ -0.74
HMGXB4-201ENST00000216106 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
HMGXB4-201ENST00000216106 TECPR2O15040 1411 aa10.42□□□□□ -0.74
HMGXB4-201ENST00000216106 ADGRB2O60241 1585 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 FER1L4A9Z1Z3 1794 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 LTKP29376 864 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 FAM135BQ49AJ0 1406 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 ADAMTS13Q76LX8 1427 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 FBLN1P23142 703 aa10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 PHF23Q9BUL5 403 aaPredicted RBP10.41□□□□□ -0.74
HMGXB4-201ENST00000216106 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
HMGXB4-201ENST00000216106 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.75
HMGXB4-201ENST00000216106 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
HMGXB4-201ENST00000216106 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
HMGXB4-201ENST00000216106 MAP2P11137 1827 aaKnown RBP10.39□□□□□ -0.75
HMGXB4-201ENST00000216106 PPM1GO15355 546 aaPredicted RBP10.39□□□□□ -0.75
HMGXB4-201ENST00000216106 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms