RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 KIF1BO60333 1816 aa17.58■□□□□ 0.41
SNU13-201ENST00000215956 PTCH1Q13635 1447 aa17.57■□□□□ 0.4
SNU13-201ENST00000215956 USP21Q9UK80 565 aa17.57■□□□□ 0.4
SNU13-201ENST00000215956 COL22A1Q8NFW1 1626 aaPredicted RBP17.56■□□□□ 0.4
SNU13-201ENST00000215956 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
SNU13-201ENST00000215956 MPHOSPH9Q99550 1183 aa17.56■□□□□ 0.4
SNU13-201ENST00000215956 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
SNU13-201ENST00000215956 ATRNO75882 1429 aa17.54■□□□□ 0.4
SNU13-201ENST00000215956 MARF1Q9Y4F3 1742 aaKnown RBP17.54■□□□□ 0.4
SNU13-201ENST00000215956 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
SNU13-201ENST00000215956 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
SNU13-201ENST00000215956 FOXD1Q16676 465 aa17.52■□□□□ 0.4
SNU13-201ENST00000215956 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.4
SNU13-201ENST00000215956 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
SNU13-201ENST00000215956 PRAG1Q86YV5 1406 aa17.51■□□□□ 0.39
SNU13-201ENST00000215956 TONSLQ96HA7 1378 aa17.5■□□□□ 0.39
SNU13-201ENST00000215956 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
SNU13-201ENST00000215956 MYOM2P54296 1465 aa17.5■□□□□ 0.39
SNU13-201ENST00000215956 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
SNU13-201ENST00000215956 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
SNU13-201ENST00000215956 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
SNU13-201ENST00000215956 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
SNU13-201ENST00000215956 BCL9LQ86UU0 1499 aa17.46■□□□□ 0.39
SNU13-201ENST00000215956 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.39
SNU13-201ENST00000215956 PXDNQ92626 1479 aa17.46■□□□□ 0.39
SNU13-201ENST00000215956 PPLO60437 1756 aa17.45■□□□□ 0.38
SNU13-201ENST00000215956 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
SNU13-201ENST00000215956 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
SNU13-201ENST00000215956 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
SNU13-201ENST00000215956 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
SNU13-201ENST00000215956 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
SNU13-201ENST00000215956 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
SNU13-201ENST00000215956 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
SNU13-201ENST00000215956 GLI3P10071 1580 aa17.4■□□□□ 0.38
SNU13-201ENST00000215956 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
SNU13-201ENST00000215956 XPCQ01831 940 aaPredicted RBP17.39■□□□□ 0.37
SNU13-201ENST00000215956 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
SNU13-201ENST00000215956 FOXO3O43524 673 aa17.38■□□□□ 0.37
SNU13-201ENST00000215956 RALGAPBQ86X10 1494 aa17.38■□□□□ 0.37
SNU13-201ENST00000215956 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
SNU13-201ENST00000215956 SLIT2O94813 1529 aa17.37■□□□□ 0.37
SNU13-201ENST00000215956 USP32Q8NFA0 1604 aa17.36■□□□□ 0.37
SNU13-201ENST00000215956 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
SNU13-201ENST00000215956 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
SNU13-201ENST00000215956 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
SNU13-201ENST00000215956 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
SNU13-201ENST00000215956 TECPR2O15040 1411 aa17.33■□□□□ 0.37
SNU13-201ENST00000215956 NUTM2FA1L443 756 aa17.33■□□□□ 0.37
SNU13-201ENST00000215956 LRP5O75197 1615 aa17.33■□□□□ 0.36
SNU13-201ENST00000215956 DEFB132Q7Z7B7 95 aa17.32■□□□□ 0.36
SNU13-201ENST00000215956 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
SNU13-201ENST00000215956 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
SNU13-201ENST00000215956 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
SNU13-201ENST00000215956 IFT172Q9UG01 1749 aa17.31■□□□□ 0.36
SNU13-201ENST00000215956 NWD2Q9ULI1 1742 aa17.31■□□□□ 0.36
SNU13-201ENST00000215956 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
SNU13-201ENST00000215956 WAPLQ7Z5K2 1190 aa17.3■□□□□ 0.36
SNU13-201ENST00000215956 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
SNU13-201ENST00000215956 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
SNU13-201ENST00000215956 STK26Q9P289 416 aa17.29■□□□□ 0.36
SNU13-201ENST00000215956 ADGRF5Q8IZF2 1346 aa17.29■□□□□ 0.36
SNU13-201ENST00000215956 ABCA3Q99758 1704 aa17.29■□□□□ 0.36
SNU13-201ENST00000215956 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
SNU13-201ENST00000215956 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
SNU13-201ENST00000215956 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
SNU13-201ENST00000215956 TNS3Q68CZ2 1445 aa17.26■□□□□ 0.35
SNU13-201ENST00000215956 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
SNU13-201ENST00000215956 VPS72Q15906 364 aa17.25■□□□□ 0.35
SNU13-201ENST00000215956 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
SNU13-201ENST00000215956 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
SNU13-201ENST00000215956 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
SNU13-201ENST00000215956 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
SNU13-201ENST00000215956 SPATA31E1Q6ZUB1 1445 aa17.23■□□□□ 0.35
SNU13-201ENST00000215956 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
SNU13-201ENST00000215956 KRT27Q7Z3Y8 459 aa17.22■□□□□ 0.35
SNU13-201ENST00000215956 CCDC9Q9Y3X0 531 aaKnown RBP17.22■□□□□ 0.35
SNU13-201ENST00000215956 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
SNU13-201ENST00000215956 RGL3Q3MIN7 710 aa17.21■□□□□ 0.35
SNU13-201ENST00000215956 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
SNU13-201ENST00000215956 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
SNU13-201ENST00000215956 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
SNU13-201ENST00000215956 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
SNU13-201ENST00000215956 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
SNU13-201ENST00000215956 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
SNU13-201ENST00000215956 PSME1Q06323 249 aa17.2■□□□□ 0.34
SNU13-201ENST00000215956 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
SNU13-201ENST00000215956 ARHGEF10O15013 1369 aa17.18■□□□□ 0.34
SNU13-201ENST00000215956 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
SNU13-201ENST00000215956 BAG6P46379 1132 aa17.18■□□□□ 0.34
SNU13-201ENST00000215956 A0A0G2JS52 829 aa17.18■□□□□ 0.34
SNU13-201ENST00000215956 MYT1Q01538 1121 aa17.18■□□□□ 0.34
SNU13-201ENST00000215956 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
SNU13-201ENST00000215956 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
SNU13-201ENST00000215956 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
SNU13-201ENST00000215956 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
SNU13-201ENST00000215956 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
SNU13-201ENST00000215956 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
SNU13-201ENST00000215956 FAM98CQ17RN3 349 aaKnown RBP17.14■□□□□ 0.33
SNU13-201ENST00000215956 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
SNU13-201ENST00000215956 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms