RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 EFCAB2Q5VUJ9 269 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 TRAPPC8Q9Y2L5 1435 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 AK9Q5TCS8 1911 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 GOLGA6L3A6NEY3 463 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 TRAK2O60296 914 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 TMEM132EQ6IEE7 984 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 SHPRHQ149N8 1683 aa7.43□□□□□ -1.22
CEACAM1-201ENST00000161559 NUP160Q12769 1436 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 ERCC6L2Q5T890 1561 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 MAST1Q9Y2H9 1570 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 ATP10AO60312 1499 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 FSD2A1L4K1 749 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 TRAK1Q9UPV9 953 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 RBM42Q9BTD8 480 aaKnown RBP7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 C22orf23Q9BZE7 217 aa7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 CFAP65Q6ZU64 1925 aaKnown RBP7.42□□□□□ -1.22
CEACAM1-201ENST00000161559 MTHFSP49914 203 aa7.41□□□□□ -1.22
CEACAM1-201ENST00000161559 SAFB2Q14151 953 aaKnown RBP eCLIP7.41□□□□□ -1.22
CEACAM1-201ENST00000161559 KDM5AP29375 1690 aaKnown RBP7.41□□□□□ -1.22
CEACAM1-201ENST00000161559 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
CEACAM1-201ENST00000161559 ZNF692Q9BU19 519 aaPredicted RBP7.41□□□□□ -1.22
CEACAM1-201ENST00000161559 MORC1Q86VD1 984 aa7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 SPHKAPQ2M3C7 1700 aa7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 CHGAP10645 457 aaKnown RBP7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 FBLN1P23142 703 aa7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 PNNQ9H307 717 aaKnown RBP7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
CEACAM1-201ENST00000161559 TRIM27P14373 513 aa7.4□□□□□ -1.23
CEACAM1-201ENST00000161559 ITPRIPQ8IWB1 547 aa7.4□□□□□ -1.23
CEACAM1-201ENST00000161559 CHAMP1Q96JM3 812 aa7.4□□□□□ -1.23
CEACAM1-201ENST00000161559 UPF2Q9HAU5 1272 aaKnown RBP7.4□□□□□ -1.23
CEACAM1-201ENST00000161559 LNPKQ9C0E8 428 aa7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 EXOSC9Q06265 439 aaKnown RBP7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 MVPQ14764 893 aaKnown RBP7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 FTSJ3Q8IY81 847 aaKnown RBP7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 U2AF1L5P0DN76 240 aaPredicted RBP7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 U2AF1Q01081 240 aaKnown RBP eCLIP7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 L1TD1Q5T7N2 865 aaKnown RBP7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 SSH1Q8WYL5 1049 aa7.39□□□□□ -1.23
CEACAM1-201ENST00000161559 ABCA6Q8N139 1617 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 PMFBP1Q8TBY8 1022 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 RUNDC1Q96C34 613 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 GRPEL1Q9HAV7 217 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 IQSEC2Q5JU85 1478 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 TNPO1Q92973 898 aaKnown RBP7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 DUOX2Q9NRD8 1548 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 SMC4Q9NTJ3 1288 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 PLXNC1O60486 1568 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 KIF3BO15066 747 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 TMEM57Q8N5G2 664 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 ZMYND15Q9H091 742 aa7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 NOB1Q9ULX3 412 aaKnown RBP7.38□□□□□ -1.23
CEACAM1-201ENST00000161559 U2SURPO15042 1029 aaKnown RBP7.37□□□□□ -1.23
CEACAM1-201ENST00000161559 CDCA8Q53HL2 280 aa7.37□□□□□ -1.23
CEACAM1-201ENST00000161559 ARID3AQ99856 593 aa7.37□□□□□ -1.23
CEACAM1-201ENST00000161559 RWDD1Q9H446 243 aaPredicted RBP7.37□□□□□ -1.23
CEACAM1-201ENST00000161559 CLCN1P35523 988 aa7.37□□□□□ -1.23
CEACAM1-201ENST00000161559 DZIP1LQ8IYY4 767 aaKnown RBP7.37□□□□□ -1.23
CEACAM1-201ENST00000161559 PKNOX2Q96KN3 472 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 CHMP5Q9NZZ3 219 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 MROH2AA6NES4 1674 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 POLR3AO14802 1390 aaPredicted RBP7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 ZBTB7CA1YPR0 619 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 KIF2CQ99661 725 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 ATAD2Q6PL18 1390 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 TRPM2O94759 1503 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 RSPH4AQ5TD94 716 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 THUMPD2Q9BTF0 503 aaKnown RBP7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 CABP2Q9NPB3 220 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 PTPRTO14522 1441 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 CD109Q6YHK3 1445 aa7.36□□□□□ -1.23
CEACAM1-201ENST00000161559 ESPNB1AK53 854 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 ZKSCAN2Q63HK3 967 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 GGNBP2Q9H3C7 697 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 NPC1L1Q9UHC9 1359 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 SPAG9O60271 1321 aaKnown RBP7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 ELL2O00472 640 aaPredicted RBP7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 SSFA2P28290 1259 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 DDIT3P35638 169 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 PKP1Q13835 747 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 MLECQ14165 292 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 HSP90AA2PQ14568 343 aaPredicted RBP7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 MYH16Q9H6N6 1097 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 TRIM35Q9UPQ4 493 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 SCAPERQ9BY12 1400 aa7.35□□□□□ -1.23
CEACAM1-201ENST00000161559 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
CEACAM1-201ENST00000161559 NOS1P29475 1434 aa7.34□□□□□ -1.23
CEACAM1-201ENST00000161559 HSP90AA1P07900 732 aaKnown RBP7.34□□□□□ -1.23
CEACAM1-201ENST00000161559 GAS2L2Q8NHY3 880 aa7.34□□□□□ -1.23
CEACAM1-201ENST00000161559 CNKSR2Q8WXI2 1034 aa7.34□□□□□ -1.23
CEACAM1-201ENST00000161559 MRE11P49959 708 aa7.34□□□□□ -1.24
CEACAM1-201ENST00000161559 RBM10P98175 930 aaKnown RBP7.34□□□□□ -1.24
CEACAM1-201ENST00000161559 ZNF518AQ6AHZ1 1483 aa7.33□□□□□ -1.24
CEACAM1-201ENST00000161559 MAP3K4Q9Y6R4 1608 aa7.33□□□□□ -1.24
CEACAM1-201ENST00000161559 NPM3O75607 178 aaKnown RBP7.33□□□□□ -1.24
CEACAM1-201ENST00000161559 HSP90AB1P08238 724 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms