RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 NEO1Q92859 1461 aa17.16■□□□□ 0.34
CTNS-201ENST00000046640 INSRP06213 1382 aa17.16■□□□□ 0.34
CTNS-201ENST00000046640 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
CTNS-201ENST00000046640 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
CTNS-201ENST00000046640 ADGRB1O14514 1584 aa17.14■□□□□ 0.33
CTNS-201ENST00000046640 DIP2CQ9Y2E4 1556 aa17.14■□□□□ 0.33
CTNS-201ENST00000046640 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
CTNS-201ENST00000046640 NEFMP07197 916 aa17.14■□□□□ 0.33
CTNS-201ENST00000046640 PPLO60437 1756 aa17.13■□□□□ 0.33
CTNS-201ENST00000046640 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
CTNS-201ENST00000046640 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
CTNS-201ENST00000046640 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
CTNS-201ENST00000046640 SLC4A3P48751 1232 aa17.12■□□□□ 0.33
CTNS-201ENST00000046640 POGKQ9P215 609 aa17.12■□□□□ 0.33
CTNS-201ENST00000046640 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
CTNS-201ENST00000046640 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
CTNS-201ENST00000046640 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
CTNS-201ENST00000046640 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
CTNS-201ENST00000046640 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
CTNS-201ENST00000046640 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
CTNS-201ENST00000046640 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
CTNS-201ENST00000046640 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
CTNS-201ENST00000046640 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
CTNS-201ENST00000046640 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
CTNS-201ENST00000046640 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
CTNS-201ENST00000046640 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTNS-201ENST00000046640 E9PSI1 815 aa17.08■□□□□ 0.32
CTNS-201ENST00000046640 FRAT1Q92837 279 aaPredicted RBP17.08■□□□□ 0.32
CTNS-201ENST00000046640 GLI2P10070 1586 aa17.07■□□□□ 0.32
CTNS-201ENST00000046640 NEXMIFQ5QGS0 1516 aa17.07■□□□□ 0.32
CTNS-201ENST00000046640 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
CTNS-201ENST00000046640 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.07■□□□□ 0.32
CTNS-201ENST00000046640 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
CTNS-201ENST00000046640 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
CTNS-201ENST00000046640 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
CTNS-201ENST00000046640 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
CTNS-201ENST00000046640 TSPOAP1O95153 1857 aa17.06■□□□□ 0.32
CTNS-201ENST00000046640 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
CTNS-201ENST00000046640 RICTORQ6R327 1708 aa17.05■□□□□ 0.32
CTNS-201ENST00000046640 FBLN1P23142 703 aa17.05■□□□□ 0.32
CTNS-201ENST00000046640 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
CTNS-201ENST00000046640 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
CTNS-201ENST00000046640 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
CTNS-201ENST00000046640 TULP4Q9NRJ4 1543 aa17.04■□□□□ 0.32
CTNS-201ENST00000046640 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
CTNS-201ENST00000046640 RGS3P49796 1198 aa17.04■□□□□ 0.32
CTNS-201ENST00000046640 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
CTNS-201ENST00000046640 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
CTNS-201ENST00000046640 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
CTNS-201ENST00000046640 A0A1W2PP64 1363 aa17.03■□□□□ 0.32
CTNS-201ENST00000046640 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
CTNS-201ENST00000046640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
CTNS-201ENST00000046640 CABP1Q9NZU7 370 aa17.02■□□□□ 0.32
CTNS-201ENST00000046640 ANKRD36BQ8N2N9 1353 aa17.02■□□□□ 0.32
CTNS-201ENST00000046640 MYO5BQ9ULV0 1848 aa17.02■□□□□ 0.31
CTNS-201ENST00000046640 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.31
CTNS-201ENST00000046640 CDK19Q9BWU1 502 aa17.02■□□□□ 0.31
CTNS-201ENST00000046640 COG6Q9Y2V7 657 aa17.02■□□□□ 0.31
CTNS-201ENST00000046640 MS4A1P11836 297 aa17.01■□□□□ 0.31
CTNS-201ENST00000046640 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
CTNS-201ENST00000046640 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
CTNS-201ENST00000046640 ZC3H13Q5T200 1668 aaKnown RBP16.99■□□□□ 0.31
CTNS-201ENST00000046640 FYB1O15117 783 aa16.99■□□□□ 0.31
CTNS-201ENST00000046640 ANO8Q9HCE9 1232 aaPredicted RBP16.99■□□□□ 0.31
CTNS-201ENST00000046640 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
CTNS-201ENST00000046640 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
CTNS-201ENST00000046640 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
CTNS-201ENST00000046640 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
CTNS-201ENST00000046640 YTHDC2Q9H6S0 1430 aaKnown RBP16.98■□□□□ 0.31
CTNS-201ENST00000046640 CENPQQ7L2Z9 268 aaPredicted RBP16.97■□□□□ 0.31
CTNS-201ENST00000046640 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
CTNS-201ENST00000046640 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
CTNS-201ENST00000046640 IGHDP01880 384 aa16.96■□□□□ 0.31
CTNS-201ENST00000046640 PREX1Q8TCU6 1659 aa16.95■□□□□ 0.3
CTNS-201ENST00000046640 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
CTNS-201ENST00000046640 TMEM131LA2VDJ0 1609 aa16.95■□□□□ 0.3
CTNS-201ENST00000046640 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
CTNS-201ENST00000046640 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
CTNS-201ENST00000046640 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 PTPRMP28827 1452 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
CTNS-201ENST00000046640 RLBP1P12271 317 aa16.93■□□□□ 0.3
CTNS-201ENST00000046640 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
CTNS-201ENST00000046640 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
CTNS-201ENST00000046640 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
CTNS-201ENST00000046640 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
CTNS-201ENST00000046640 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
CTNS-201ENST00000046640 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
CTNS-201ENST00000046640 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
CTNS-201ENST00000046640 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
CTNS-201ENST00000046640 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
CTNS-201ENST00000046640 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
CTNS-201ENST00000046640 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
CTNS-201ENST00000046640 ALKQ9UM73 1620 aa16.89■□□□□ 0.29
CTNS-201ENST00000046640 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
CTNS-201ENST00000046640 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms