RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Nwd1A6H603 1563 aa26.4■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Cwc22Q8C5N3 908 aaKnown RBP26.39■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Gm16486A0A1D5RMD1 1434 aa26.39■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Abca14E9Q8F8 1683 aa26.38■■□□□ 1.81
Scn1b-203ENSMUST00000211945 Kif20bQ80WE4 1774 aaKnown RBP26.38■■□□□ 1.81
Scn1b-203ENSMUST00000211945 Col14a1Q80X19 1797 aa26.35■■□□□ 1.81
Scn1b-203ENSMUST00000211945 Iqsec2Q5DU25 1478 aa26.34■■□□□ 1.81
Scn1b-203ENSMUST00000211945 Rreb1Q3UH06 1700 aaKnown RBP26.33■■□□□ 1.81
Scn1b-203ENSMUST00000211945 Atp2b2Q9R0K7 1198 aa26.33■■□□□ 1.81
Scn1b-203ENSMUST00000211945 Sin3aQ60520 1274 aaKnown RBP26.32■■□□□ 1.8
Scn1b-203ENSMUST00000211945 D430041D05RikF6ZGR6 1678 aa26.31■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Tmem94Q7TSH8 1360 aa26.3■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Q3UJC8 639 aa26.3■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Slain2Q8CI08 581 aa26.3■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Amigo3Q8C2S7 508 aa26.29■■□□□ 1.8
Scn1b-203ENSMUST00000211945 CenpjQ569L8 1344 aa26.29■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Bcl11bQ99PV8 884 aa26.29■■□□□ 1.8
Scn1b-203ENSMUST00000211945 NktrP30415 1453 aa26.28■■□□□ 1.8
Scn1b-203ENSMUST00000211945 NalcnQ8BXR5 1738 aa26.28■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Mink1Q9JM52 1308 aa26.27■■□□□ 1.8
Scn1b-203ENSMUST00000211945 Pik3c2bE9QAN8 1632 aa26.26■■□□□ 1.79
Scn1b-203ENSMUST00000211945 Sirt1Q923E4 737 aa26.24■■□□□ 1.79
Scn1b-203ENSMUST00000211945 Als2Q920R0 1651 aa26.24■■□□□ 1.79
Scn1b-203ENSMUST00000211945 Zbtb4Q5F293 982 aa26.24■■□□□ 1.79
Scn1b-203ENSMUST00000211945 C3P01027 1663 aa26.23■■□□□ 1.79
Scn1b-203ENSMUST00000211945 C5P06684 1680 aa26.23■■□□□ 1.79
Scn1b-203ENSMUST00000211945 InsrP15208 1372 aa26.22■■□□□ 1.79
Scn1b-203ENSMUST00000211945 Aebp2Q9Z248 504 aaKnown RBP26.2■■□□□ 1.79
Scn1b-203ENSMUST00000211945 Cdk19Q8BWD8 501 aa26.19■■□□□ 1.78
Scn1b-203ENSMUST00000211945 Gm10563F6WIE4 79 aa26.19■■□□□ 1.78
Scn1b-203ENSMUST00000211945 Tnrc6bQ8BKI2 1810 aaKnown RBP26.16■■□□□ 1.78
Scn1b-203ENSMUST00000211945 Evi5lH3BKQ3 813 aa26.16■■□□□ 1.78
Scn1b-203ENSMUST00000211945 Brinp3Q499E0 766 aa26.14■■□□□ 1.78
Scn1b-203ENSMUST00000211945 Sipa1l2Q80TE4 1722 aa26.14■■□□□ 1.78
Scn1b-203ENSMUST00000211945 Gsto1O09131 240 aa26.14■■□□□ 1.77
Scn1b-203ENSMUST00000211945 Plekhg5Q66T02 1073 aa26.14■■□□□ 1.77
Scn1b-203ENSMUST00000211945 Sbno1Q689Z5 1390 aa26.1■■□□□ 1.77
Scn1b-203ENSMUST00000211945 GapdhsQ64467 440 aa26.09■■□□□ 1.77
Scn1b-203ENSMUST00000211945 Wnk3Q80XP9 1757 aa26.08■■□□□ 1.77
Scn1b-203ENSMUST00000211945 N4bp2F8VQG7 1678 aaKnown RBP26.07■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Idi1P58044 227 aa26.06■■□□□ 1.76
Scn1b-203ENSMUST00000211945 FanciQ8K368 1330 aa26.06■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Camta1A2A891 1682 aa26.05■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Atf3Q60765 181 aa26.05■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Abcc10Q8R4P9 1501 aa26.05■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Zranb1Q7M760 708 aa26.04■■□□□ 1.76
Scn1b-203ENSMUST00000211945 PtpruB1AUH1 1446 aa26.04■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Idi2Q8BFZ6 227 aa26.03■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Mon2Q80TL7 1715 aa26.02■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Exosc9Q9JHI7 438 aaKnown RBP26.02■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Tmem2Q5FWI3 1383 aa26.02■■□□□ 1.76
Scn1b-203ENSMUST00000211945 Map3k19E9Q3S4 1311 aa25.99■■□□□ 1.75
Scn1b-203ENSMUST00000211945 Kcna6Q61923 529 aa25.99■■□□□ 1.75
Scn1b-203ENSMUST00000211945 ClspnQ80YR7 1315 aa25.98■■□□□ 1.75
Scn1b-203ENSMUST00000211945 Adgrl1Q80TR1 1466 aa25.97■■□□□ 1.75
Scn1b-203ENSMUST00000211945 PrxO55103 1391 aa25.96■■□□□ 1.75
Scn1b-203ENSMUST00000211945 Slc4a1apE9PX68 744 aa25.96■■□□□ 1.75
Scn1b-203ENSMUST00000211945 Wdr66E9Q743 1299 aa25.95■■□□□ 1.74
Scn1b-203ENSMUST00000211945 DccP70211 1447 aa25.95■■□□□ 1.74
Scn1b-203ENSMUST00000211945 CatipB9EKE5 520 aa25.93■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Fam184bQ0KK56 942 aa25.93■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Tom1O88746 492 aa25.93■■□□□ 1.74
Scn1b-203ENSMUST00000211945 KdrP35918 1367 aa25.92■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Cnga1P29974 684 aa25.92■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Znf316Q6PGE4 1016 aa25.92■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Ap3b2Q9JME5 1082 aa25.92■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Znf335A2A5K6 1337 aa25.91■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Tmf1B9EKI3 1091 aa25.91■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Kif1aP33173 1695 aa25.91■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Nrxn1Q9CS84 1514 aa25.91■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Pank3Q8R2W9 370 aa25.9■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Farp2Q91VS8 1065 aa25.9■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Slc24a1Q91WD8 1130 aa25.89■■□□□ 1.74
Scn1b-203ENSMUST00000211945 Sox12Q04890 314 aa25.88■■□□□ 1.73
Scn1b-203ENSMUST00000211945 Gimap5Q8BWF2 308 aa25.85■■□□□ 1.73
Scn1b-203ENSMUST00000211945 Pik3c2aQ61194 1686 aa25.84■■□□□ 1.73
Scn1b-203ENSMUST00000211945 NgefQ8CHT1 710 aa25.83■■□□□ 1.73
Scn1b-203ENSMUST00000211945 Ttll13A4Q9F6 804 aa25.83■■□□□ 1.72
Scn1b-203ENSMUST00000211945 Inpp5dQ9ES52 1191 aa25.83■■□□□ 1.72
Scn1b-203ENSMUST00000211945 Wdr17E9Q271 1322 aa25.83■■□□□ 1.72
Scn1b-203ENSMUST00000211945 GnpatP98192 678 aa25.81■■□□□ 1.72
Scn1b-203ENSMUST00000211945 Gprasp1Q5U4C1 1347 aa25.79■■□□□ 1.72
Scn1b-203ENSMUST00000211945 Zscan10Q3URR7 782 aa25.79■■□□□ 1.72
Scn1b-203ENSMUST00000211945 NinlQ6ZQ12 1394 aa25.78■■□□□ 1.72
Scn1b-203ENSMUST00000211945 Kif24Q6NWW5 1356 aa25.76■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Slc35g1Q8BY79 368 aa25.75■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Chd4Q6PDQ2 1915 aaKnown RBP25.74■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Ddx17Q501J6 650 aaKnown RBP25.73■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Kif16bB1AVY7 1312 aa25.73■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Nyap1Q6PFX7 833 aa25.73■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Fbln2P37889 1221 aa25.71■■□□□ 1.71
Scn1b-203ENSMUST00000211945 Marf1Q8BJ34 1730 aaKnown RBP25.7■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Mapk8ip2Q9ERE9 830 aa25.7■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Smg6P61406 1418 aaKnown RBP25.7■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Zfp142G5E869 1843 aa25.69■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Col16a1Q8BLX7 1580 aa25.69■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Atp7bQ64446 1462 aa25.68■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Frmpd2A0A140LI67 1392 aa25.68■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Astn2Q80Z10 1352 aa25.68■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Fyb1O35601 819 aa25.68■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms