RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Cc2d1aQ8K1A6 943 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Myom3A2ABU4 1439 aa16.23■□□□□ 0.19
Rnf40-202ENSMUST00000205694 VgfQ0VGU4 617 aa16.23■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Srek1Q8BZX4 494 aaKnown RBP16.23■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Casq1O09165 405 aa16.23■□□□□ 0.19
Rnf40-202ENSMUST00000205694 SetQ9EQU5 289 aaKnown RBP16.22■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Esx1O88933 382 aa16.22■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Kri1Q8VDQ9 704 aaKnown RBP16.22■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Ddx11Q6AXC6 880 aa16.21■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Tpm1P58771 284 aa16.21■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Arhgef11Q68FM7 1552 aa16.21■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Krt82Q99M74 516 aa16.21■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Nolc1E9Q5C9 702 aaKnown RBP16.2■□□□□ 0.18
Rnf40-202ENSMUST00000205694 KinQ8K339 391 aa16.2■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Adcy10Q8C0T9 1614 aa16.2■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Trappc8E9PWG2 1437 aa16.2■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Triml2E9PW10 424 aa16.19■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Ttc21bQ0HA38 1315 aa16.19■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Lmtk2Q3TYD6 1471 aa16.19■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Fyb1O35601 819 aa16.19■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Rnf20Q5DTM8 973 aa16.19■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Dhx9O70133 1380 aaKnown RBP16.19■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Tpm2P58774 284 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Ppm1fQ8CGA0 452 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Ipo7Q9EPL8 1038 aaKnown RBP16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Cep170Q6A065 1588 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Tomm22Q9CPQ3 142 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Ush1cQ9ES64 910 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Gnai1B2RSH2 354 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Mre11Q61216 706 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Gnai3Q9DC51 354 aa16.18■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Eif2s2Q99L45 331 aaKnown RBP16.17■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Puf60Q3UEB3 564 aaKnown RBP16.17■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Tpm4Q6IRU2 248 aa16.17■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Kif16bB1AVY7 1312 aa16.17■□□□□ 0.18
Rnf40-202ENSMUST00000205694 A0A1L1SQF0 893 aa16.17■□□□□ 0.18
Rnf40-202ENSMUST00000205694 GphnQ8BUV3 769 aaKnown RBP16.17■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Gsdma3Q5Y4Y6 464 aa16.16■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Kdm5bQ80Y84 1544 aa16.16■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Dhx16G3X8X0 1044 aaKnown RBP16.16■□□□□ 0.18
Rnf40-202ENSMUST00000205694 BccipQ9CWI3 316 aa16.16■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Abcc2Q8VI47 1543 aa16.16■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Gsto1O09131 240 aa16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Gprasp1Q5U4C1 1347 aa16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 3425401B19RikD3Z1D3 1412 aa16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 PnisrA2AJT4 805 aaKnown RBP16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Atl3Q91YH5 541 aa16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Usp16Q99LG0 825 aa16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 Cplx1P63040 134 aa16.15■□□□□ 0.18
Rnf40-202ENSMUST00000205694 PhaxQ9JJT9 385 aaKnown RBP16.14■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Q8C5K5 320 aa16.14■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Q9D9H8 365 aa16.14■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Rfx1P48377 963 aa16.14■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Ric3Q8BPM6 367 aa16.14■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Ccdc30Q8BVF4 654 aa16.13■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Gabpb2P81069 414 aa16.13■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Ak7Q9D2H2 614 aa16.13■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Gcc2Q8CHG3 1679 aa16.12■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Dnmt1P13864 1620 aaKnown RBP16.12■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Swt1Q9DBQ9 907 aa16.12■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Erc2Q6PH08 957 aa16.12■□□□□ 0.17
Rnf40-202ENSMUST00000205694 CrcpO35427 148 aa16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Bicd2Q921C5 820 aa16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Odf2A3KGV1 830 aaKnown RBP16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Q9D2X8 372 aa16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Utp3Q9JI13 469 aaKnown RBP16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 FanciQ8K368 1330 aa16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 DroshaQ5HZJ0 1373 aaKnown RBP16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Map7d2A2AG50 781 aa16.11■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Rec8Q8C5S7 591 aa16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Phactr2B1AVP0 632 aa16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Cetn4Q8K4K1 168 aa16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 NexnQ7TPW1 607 aa16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Pip4k2bQ80XI4 416 aa16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Rabep1O35551 862 aa16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Smc3Q9CW03 1217 aaKnown RBP16.1■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Cfdp1O88271 295 aaKnown RBP16.09■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Neurod6P48986 337 aa16.09■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Ftsj3Q9DBE9 838 aaKnown RBP16.09■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Adgrl2Q8JZZ7 1487 aa16.09■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Ubap1lG3UW59 384 aa16.08■□□□□ 0.17
Rnf40-202ENSMUST00000205694 Noc3lQ8VI84 807 aaKnown RBP16.08■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Arhgef40Q3UPH7 1517 aa16.08■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Kif4P33174 1231 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Ccp110Q7TSH4 1004 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Rpgrip1lQ8CG73 1264 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 TatQ8QZR1 454 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Gripap1Q8VD04 806 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Rbm25B2RY56 838 aaKnown RBP16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Taok2Q6ZQ29 1240 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Hook1Q8BIL5 728 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 UvssaQ9D479 717 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Slc52a2Q9D8F3 450 aa16.07■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Atp2b2Q9R0K7 1198 aa16.06■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Gnl3lQ6PGG6 577 aaKnown RBP16.06■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Polr3gQ6NXY9 223 aa16.05■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Dennd4bQ3U1Y4 1499 aa16.05■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Kif3aP28741 701 aa16.04■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Sv2bQ8BG39 683 aa16.04■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Cchcr1Q8K2I2 770 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms