RNA–Protein interactions for RNA: ENSMUST00000172768.7

Ptbp3-208, Transcript of Polypyrimidine tract-binding protein 3, mouse

APPRIS ALT2 TSL 5 BASIC

Gene Ptbp3, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Ptbp3-208	ENSMUST00000172768	Cep170b	Q80U49	1574 aa		29.35	■■■□□ 2.29
Ptbp3-208	ENSMUST00000172768	Utp14a	Q640M1	767 aa	Known RBP	29.33	■■■□□ 2.29
Ptbp3-208	ENSMUST00000172768	Eif2ak4	Q9QZ05	1648 aa		29.33	■■■□□ 2.29
Ptbp3-208	ENSMUST00000172768	Safb2	Q80YR5	991 aa	Known RBP	29.33	■■■□□ 2.29
Ptbp3-208	ENSMUST00000172768	Calr4	Q3TQS0	420 aa		29.31	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Atf7ip	Q7TT18	1306 aa		29.3	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Mink1	Q9JM52	1308 aa		29.3	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Ppl	Q9R269	1755 aa		29.29	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Plekhg1	F6S200	1446 aa		29.28	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Exosc9	Q9JHI7	438 aa	Known RBP	29.28	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Psme1	P97371	249 aa		29.27	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Prdm10	Q3UTQ7	1184 aa		29.27	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Txndc2	Q6P902	515 aa		29.27	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	1700123L14Rik	Q3V2K7	440 aa		29.27	■■■□□ 2.28
Ptbp3-208	ENSMUST00000172768	Safb	D3YXK2	937 aa	Known RBP	29.24	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Nlrp6	Q91WS2	869 aa		29.24	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Chd2	E9PZM4	1827 aa	Known RBP	29.24	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Atp2b2	Q9R0K7	1198 aa		29.24	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Dip2a	Q8BWT5	1523 aa		29.24	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Kdr	P35918	1367 aa		29.23	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Esx1	O88933	382 aa		29.23	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Asxl2	Q8BZ32	1370 aa		29.22	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Gemin5	Q8BX17	1502 aa	Known RBP	29.21	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Zfp444	Q3TDV8	331 aa	Known RBP	29.21	■■■□□ 2.27
Ptbp3-208	ENSMUST00000172768	Gsto1	O09131	240 aa		29.2	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	Abca14	E9Q8F8	1683 aa		29.19	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	Zranb1	Q7M760	708 aa		29.17	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	Cdk19	Q8BWD8	501 aa		29.17	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	Nrxn1	Q9CS84	1514 aa		29.17	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	Gm38655	A0A286YDK6	273 aa		29.15	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	L3mbtl2	P59178	703 aa		29.14	■■■□□ 2.26
Ptbp3-208	ENSMUST00000172768	Rad21	Q61550	635 aa	Known RBP	29.14	■■■□□ 2.25
Ptbp3-208	ENSMUST00000172768	Scaf11	E9PZM7	1456 aa	Known RBP	29.12	■■■□□ 2.25
Ptbp3-208	ENSMUST00000172768	Nktr	P30415	1453 aa		29.12	■■■□□ 2.25
Ptbp3-208	ENSMUST00000172768	Nwd1	A6H603	1563 aa		29.09	■■■□□ 2.25
Ptbp3-208	ENSMUST00000172768	Igha	A0A0A6YXW6	389 aa		29.09	■■■□□ 2.25
Ptbp3-208	ENSMUST00000172768	Cald1	E9QA15	768 aa	Known RBP	29.08	■■■□□ 2.25
Ptbp3-208	ENSMUST00000172768	Kank1	E9Q238	1360 aa		29.07	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Fanci	Q8K368	1330 aa		29.07	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Slit3	Q9WVB4	1523 aa		29.07	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Dip2b	Q3UH60	1574 aa		29.06	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Pcdh10	E9PXQ7	1057 aa		29.06	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Crbn	Q8C7D2	445 aa		29.05	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Adgrl1	Q80TR1	1466 aa		29.04	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Ibtk	Q6ZPR6	1352 aa	Known RBP	29.04	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Kiaa1107	Q80TK0	1369 aa		29.04	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Kif16b	B1AVY7	1312 aa		29.03	■■■□□ 2.24
Ptbp3-208	ENSMUST00000172768	Upf2	A2AT37	1269 aa	Known RBP	29.01	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Pzp	Q61838	1495 aa		28.99	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	P2rx7	Q9Z1M0	595 aa		28.99	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Erbb3	Q61526	1339 aa		28.99	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Usp19	Q3UJD6	1360 aa		28.98	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Ninl	Q6ZQ12	1394 aa		28.98	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Golga2	Q921M4	999 aa		28.98	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Cps1	Q8C196	1500 aa		28.96	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Gsdma	Q9EST1	446 aa		28.96	■■■□□ 2.23
Ptbp3-208	ENSMUST00000172768	Map3k19	E9Q3S4	1311 aa		28.95	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Dnajc5	P60904	198 aa		28.94	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Hnrnpm	Q9D0E1	729 aa	Known RBP	28.93	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Pik3r4	Q8VD65	1358 aa		28.93	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	4930407I10Rik	D3Z5T8	1512 aa		28.92	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Map4k4	P97820	1233 aa	Known RBP	28.91	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Speer4f1	Q9D5Q6	258 aa		28.91	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Cenpb	P27790	599 aa		28.9	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Uspl1	Q3ULM6	1089 aa		28.89	■■■□□ 2.22
Ptbp3-208	ENSMUST00000172768	Bcl9	Q9D219	1425 aa		28.88	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Usp32	F8VPZ3	1604 aa		28.88	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Mycl	P10166	368 aa		28.87	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Idi2	Q8BFZ6	227 aa		28.87	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Arap3	Q8R5G7	1538 aa		28.86	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Znf316	Q6PGE4	1016 aa		28.85	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Ttc41	Q692V3	1318 aa		28.84	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Pik3c2b	E9QAN8	1632 aa		28.83	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Gphn	Q8BUV3	769 aa	Known RBP	28.83	■■■□□ 2.21
Ptbp3-208	ENSMUST00000172768	Tsen2	Q6P7W5	460 aa		28.82	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Ptpru	B1AUH1	1446 aa		28.82	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Neurod2	Q62414	383 aa		28.82	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Ralbp1	Q62172	648 aa		28.81	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Ccdc30	Q8BVF4	654 aa		28.81	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	U2af1	Q9D883	239 aa	Known RBP	28.8	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768		Q3UJC8	639 aa		28.79	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Sirt1	Q923E4	737 aa		28.78	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Lmtk3	Q5XJV6	1424 aa		28.77	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Tnrc6b	Q8BKI2	1810 aa	Known RBP	28.77	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Plekhh1	Q80TI1	1356 aa		28.76	■■■□□ 2.2
Ptbp3-208	ENSMUST00000172768	Iqsec2	Q5DU25	1478 aa		28.76	■■■□□ 2.19
Ptbp3-208	ENSMUST00000172768	Rreb1	Q3UH06	1700 aa	Known RBP	28.76	■■■□□ 2.19
Ptbp3-208	ENSMUST00000172768	Catip	B9EKE5	520 aa		28.75	■■■□□ 2.19
Ptbp3-208	ENSMUST00000172768	Anp32a	O35381	247 aa		28.75	■■■□□ 2.19
Ptbp3-208	ENSMUST00000172768	Wdr43	Q6ZQL4	677 aa	Known RBP	28.74	■■■□□ 2.19
Ptbp3-208	ENSMUST00000172768	Tcerg1	Q8CGF7	1100 aa	Known RBP	28.71	■■■□□ 2.19
Ptbp3-208	ENSMUST00000172768	Apaf1	O88879	1249 aa		28.7	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Ppp4r2	Q0VGB7	417 aa		28.7	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Trim28	Q62318	834 aa		28.69	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Kif1a	P33173	1695 aa		28.67	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Rwdd1	Q9CQK7	243 aa		28.67	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Topaz1	E5FYH1	1653 aa		28.66	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Birc3	O08863	600 aa		28.66	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Kcnh8	P59111	1102 aa		28.65	■■■□□ 2.18
Ptbp3-208	ENSMUST00000172768	Mlec	Q6ZQI3	291 aa	Known RBP	28.65	■■■□□ 2.18

Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms