RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Pik3c2bE9QAN8 1632 aa12.22□□□□□ -0.45
Trim40-203ENSMUST00000172711 Ddx17Q501J6 650 aaKnown RBP12.21□□□□□ -0.45
Trim40-203ENSMUST00000172711 Tshz2Q68FE9 1030 aa12.21□□□□□ -0.45
Trim40-203ENSMUST00000172711 Zranb1Q7M760 708 aa12.21□□□□□ -0.45
Trim40-203ENSMUST00000172711 Ybx3Q9JKB3 361 aaKnown RBP12.21□□□□□ -0.45
Trim40-203ENSMUST00000172711 Itsn2Q9Z0R6 1659 aa12.21□□□□□ -0.45
Trim40-203ENSMUST00000172711 KdrP35918 1367 aa12.21□□□□□ -0.45
Trim40-203ENSMUST00000172711 WdpcpQ8C456 722 aa12.21□□□□□ -0.46
Trim40-203ENSMUST00000172711 Rgs17Q9QZB0 210 aa12.21□□□□□ -0.46
Trim40-203ENSMUST00000172711 Rprd2Q6NXI6 1469 aaKnown RBP12.21□□□□□ -0.46
Trim40-203ENSMUST00000172711 Marf1Q8BJ34 1730 aaKnown RBP12.2□□□□□ -0.46
Trim40-203ENSMUST00000172711 Pik3r4Q8VD65 1358 aa12.2□□□□□ -0.46
Trim40-203ENSMUST00000172711 Dapk1Q80YE7 1442 aa12.2□□□□□ -0.46
Trim40-203ENSMUST00000172711 Sipa1l2Q80TE4 1722 aa12.19□□□□□ -0.46
Trim40-203ENSMUST00000172711 Shq1Q7TMX5 569 aa12.19□□□□□ -0.46
Trim40-203ENSMUST00000172711 Kif24Q6NWW5 1356 aa12.19□□□□□ -0.46
Trim40-203ENSMUST00000172711 Kif20bQ80WE4 1774 aaKnown RBP12.19□□□□□ -0.46
Trim40-203ENSMUST00000172711 MpndQ3TV65 487 aa12.18□□□□□ -0.46
Trim40-203ENSMUST00000172711 Ggt6Q6PDE7 497 aa12.18□□□□□ -0.46
Trim40-203ENSMUST00000172711 Riok3Q9DBU3 519 aaKnown RBP12.18□□□□□ -0.46
Trim40-203ENSMUST00000172711 Cps1Q8C196 1500 aa12.17□□□□□ -0.46
Trim40-203ENSMUST00000172711 Plxnc1Q9QZC2 1574 aa12.17□□□□□ -0.46
Trim40-203ENSMUST00000172711 Dhx9O70133 1380 aaKnown RBP12.16□□□□□ -0.46
Trim40-203ENSMUST00000172711 MaddQ80U28 1577 aa12.16□□□□□ -0.46
Trim40-203ENSMUST00000172711 Rreb1Q3UH06 1700 aaKnown RBP12.16□□□□□ -0.46
Trim40-203ENSMUST00000172711 Smim5Q8BT42 78 aa12.16□□□□□ -0.46
Trim40-203ENSMUST00000172711 N4bp2F8VQG7 1678 aaKnown RBP12.15□□□□□ -0.46
Trim40-203ENSMUST00000172711 GnpatP98192 678 aa12.14□□□□□ -0.47
Trim40-203ENSMUST00000172711 Wnk3Q80XP9 1757 aa12.14□□□□□ -0.47
Trim40-203ENSMUST00000172711 Prdm10Q3UTQ7 1184 aa12.13□□□□□ -0.47
Trim40-203ENSMUST00000172711 Usp32F8VPZ3 1604 aa12.13□□□□□ -0.47
Trim40-203ENSMUST00000172711 Abcc10Q8R4P9 1501 aa12.13□□□□□ -0.47
Trim40-203ENSMUST00000172711 D430041D05RikF6ZGR6 1678 aa12.12□□□□□ -0.47
Trim40-203ENSMUST00000172711 Mia2Q91ZV0 1396 aa12.12□□□□□ -0.47
Trim40-203ENSMUST00000172711 Dot1lQ6XZL8 1540 aa12.11□□□□□ -0.47
Trim40-203ENSMUST00000172711 Gm10563F6WIE4 79 aa12.11□□□□□ -0.47
Trim40-203ENSMUST00000172711 DccP70211 1447 aa12.09□□□□□ -0.47
Trim40-203ENSMUST00000172711 Eno4Q8C042 619 aa12.08□□□□□ -0.48
Trim40-203ENSMUST00000172711 Cep170bQ80U49 1574 aa12.07□□□□□ -0.48
Trim40-203ENSMUST00000172711 Ppip5k1A2ARP1 1436 aa12.07□□□□□ -0.48
Trim40-203ENSMUST00000172711 Mphosph9A6H5Y1 991 aa12.07□□□□□ -0.48
Trim40-203ENSMUST00000172711 C5P06684 1680 aa12.07□□□□□ -0.48
Trim40-203ENSMUST00000172711 Col22a1E9Q7P1 1613 aa12.06□□□□□ -0.48
Trim40-203ENSMUST00000172711 Tex14Q7M6U3 1450 aa12.06□□□□□ -0.48
Trim40-203ENSMUST00000172711 Als2Q920R0 1651 aa12.06□□□□□ -0.48
Trim40-203ENSMUST00000172711 Farp2Q91VS8 1065 aa12.06□□□□□ -0.48
Trim40-203ENSMUST00000172711 Stk26Q99JT2 416 aa12.06□□□□□ -0.48
Trim40-203ENSMUST00000172711 Rims1Q99NE5 1463 aa12.05□□□□□ -0.48
Trim40-203ENSMUST00000172711 Robo1O89026 1612 aa12.05□□□□□ -0.48
Trim40-203ENSMUST00000172711 Q3UJC8 639 aa12.05□□□□□ -0.48
Trim40-203ENSMUST00000172711 Kcna6Q61923 529 aa12.04□□□□□ -0.48
Trim40-203ENSMUST00000172711 Acsbg1Q99PU5 721 aa12.04□□□□□ -0.48
Trim40-203ENSMUST00000172711 Styxl1Q9DAR2 321 aa12.04□□□□□ -0.48
Trim40-203ENSMUST00000172711 Washc2Q6PGL7 1334 aa12.04□□□□□ -0.48
Trim40-203ENSMUST00000172711 Tulp4Q9JIL5 1547 aa12.02□□□□□ -0.48
Trim40-203ENSMUST00000172711 Mroh3A0A1D5RM54 893 aa12.02□□□□□ -0.48
Trim40-203ENSMUST00000172711 Utp14aQ640M1 767 aaKnown RBP12.02□□□□□ -0.48
Trim40-203ENSMUST00000172711 Camta1A2A891 1682 aa12.02□□□□□ -0.48
Trim40-203ENSMUST00000172711 Emilin2Q8K482 1074 aa12.01□□□□□ -0.49
Trim40-203ENSMUST00000172711 Ddx54Q8K4L0 874 aaKnown RBP12.01□□□□□ -0.49
Trim40-203ENSMUST00000172711 Fam135bQ9DAI6 1403 aa12□□□□□ -0.49
Trim40-203ENSMUST00000172711 Pkd2O35245 966 aa12□□□□□ -0.49
Trim40-203ENSMUST00000172711 Arhgef1Q61210 920 aaKnown RBP12□□□□□ -0.49
Trim40-203ENSMUST00000172711 Cdk5rap2Q8K389 1822 aa12□□□□□ -0.49
Trim40-203ENSMUST00000172711 Kif1aP33173 1695 aa12□□□□□ -0.49
Trim40-203ENSMUST00000172711 Tnrc6cQ3UHC0 1690 aaKnown RBP12□□□□□ -0.49
Trim40-203ENSMUST00000172711 Adamts13Q769J6 1426 aa11.99□□□□□ -0.49
Trim40-203ENSMUST00000172711 Idi1P58044 227 aa11.99□□□□□ -0.49
Trim40-203ENSMUST00000172711 PtpruB1AUH1 1446 aa11.98□□□□□ -0.49
Trim40-203ENSMUST00000172711 Tmem2Q5FWI3 1383 aa11.98□□□□□ -0.49
Trim40-203ENSMUST00000172711 Abca15E9PWH4 1668 aa11.98□□□□□ -0.49
Trim40-203ENSMUST00000172711 Abca14E9Q8F8 1683 aa11.98□□□□□ -0.49
Trim40-203ENSMUST00000172711 Sgsm1Q8BPQ7 1093 aa11.97□□□□□ -0.49
Trim40-203ENSMUST00000172711 Psrc1Q9D0P7 329 aa11.96□□□□□ -0.49
Trim40-203ENSMUST00000172711 Atp7bQ64446 1462 aa11.96□□□□□ -0.49
Trim40-203ENSMUST00000172711 Lrrc7Q80TE7 1490 aa11.96□□□□□ -0.49
Trim40-203ENSMUST00000172711 Ltbp1Q8CG19 1712 aa11.96□□□□□ -0.5
Trim40-203ENSMUST00000172711 Kdm2aP59997 1161 aa11.95□□□□□ -0.5
Trim40-203ENSMUST00000172711 Fan1Q69ZT1 1020 aa11.95□□□□□ -0.5
Trim40-203ENSMUST00000172711 Slc52a2Q9D8F3 450 aa11.95□□□□□ -0.5
Trim40-203ENSMUST00000172711 Kdm2bQ6P1G2 1309 aa11.94□□□□□ -0.5
Trim40-203ENSMUST00000172711 Tnks1bp1P58871 1720 aa11.93□□□□□ -0.5
Trim40-203ENSMUST00000172711 Atp10bB1AWN4 1474 aa11.93□□□□□ -0.5
Trim40-203ENSMUST00000172711 Ccdc6D3YZP9 469 aa11.93□□□□□ -0.5
Trim40-203ENSMUST00000172711 Lrrc59Q922Q8 307 aaKnown RBP11.93□□□□□ -0.5
Trim40-203ENSMUST00000172711 Cep152A2AUM9 1736 aaKnown RBP11.93□□□□□ -0.5
Trim40-203ENSMUST00000172711 InhbeO08717 350 aa11.92□□□□□ -0.5
Trim40-203ENSMUST00000172711 Puf60Q3UEB3 564 aaKnown RBP11.92□□□□□ -0.5
Trim40-203ENSMUST00000172711 Sipa1l1Q8C0T5 1782 aa11.92□□□□□ -0.5
Trim40-203ENSMUST00000172711 Ifit1bl1D3Z6F0 470 aa11.9□□□□□ -0.5
Trim40-203ENSMUST00000172711 NgefQ8CHT1 710 aa11.9□□□□□ -0.5
Trim40-203ENSMUST00000172711 Wdr17E9Q271 1322 aa11.89□□□□□ -0.51
Trim40-203ENSMUST00000172711 Slc35g1Q8BY79 368 aa11.89□□□□□ -0.51
Trim40-203ENSMUST00000172711 Hdac5Q9Z2V6 1113 aa11.89□□□□□ -0.51
Trim40-203ENSMUST00000172711 Plekhg1F6S200 1446 aa11.89□□□□□ -0.51
Trim40-203ENSMUST00000172711 VirmaA2AIV2 1811 aaKnown RBP11.89□□□□□ -0.51
Trim40-203ENSMUST00000172711 Rock1P70335 1354 aa11.88□□□□□ -0.51
Trim40-203ENSMUST00000172711 Acin1Q9JIX8 1338 aaKnown RBP11.88□□□□□ -0.51
Trim40-203ENSMUST00000172711 Shank2Q80Z38 1476 aa11.88□□□□□ -0.51
Trim40-203ENSMUST00000172711 Srpk2O54781 681 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms