RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Hsp90ab1P11499 724 aaKnown RBP14.82□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ccdc9Q8VC31 543 aaKnown RBP14.82□□□□□ -0.04
Vps54-202ENSMUST00000109578 Duxf3A0A0N4SV92 674 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ipo8Q7TMY7 1010 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Iqgap3F8VQ29 1632 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Fndc1E9Q043 1732 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Gprasp1Q5U4C1 1347 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Zranb1Q7M760 708 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Cep152A2AUM9 1736 aaKnown RBP14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Zfyve16Q80U44 1528 aa14.81□□□□□ -0.04
Vps54-202ENSMUST00000109578 Rims1Q99NE5 1463 aa14.8□□□□□ -0.04
Vps54-202ENSMUST00000109578 Mre11Q61216 706 aa14.8□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ccdc183A2AJB1 534 aa14.8□□□□□ -0.04
Vps54-202ENSMUST00000109578 AU022751B1B0V2 589 aa14.8□□□□□ -0.04
Vps54-202ENSMUST00000109578 Gtf3c3Q3TMP1 882 aa14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ksr2Q3UVC0 959 aa14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ecm2Q5FW85 670 aa14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Trim58Q5NCC9 485 aa14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Rangap1P46061 589 aaKnown RBP14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Cdk5rap2Q8K389 1822 aa14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Myom1Q62234 1667 aaKnown RBP14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Map4k4P97820 1233 aaKnown RBP14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Abca9Q8K449 1623 aa14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 Znf518aB2RRF6 1478 aaKnown RBP14.79□□□□□ -0.04
Vps54-202ENSMUST00000109578 IbtkQ6ZPR6 1352 aaKnown RBP14.78□□□□□ -0.04
Vps54-202ENSMUST00000109578 Irx3P81067 507 aa14.78□□□□□ -0.04
Vps54-202ENSMUST00000109578 U2af1Q9D883 239 aaKnown RBP14.78□□□□□ -0.04
Vps54-202ENSMUST00000109578 Tmem131lQ3U3D7 1597 aa14.78□□□□□ -0.04
Vps54-202ENSMUST00000109578 Cald1E9QA15 768 aaKnown RBP14.78□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ppp1r3fQ9JIG4 799 aa14.77□□□□□ -0.04
Vps54-202ENSMUST00000109578 Stk26Q99JT2 416 aa14.77□□□□□ -0.05
Vps54-202ENSMUST00000109578 Znf521Q6KAS7 1311 aa14.77□□□□□ -0.05
Vps54-202ENSMUST00000109578 KarsQ99MN1 595 aaKnown RBP14.77□□□□□ -0.05
Vps54-202ENSMUST00000109578 Talpid3E9PV87 1520 aa14.76□□□□□ -0.05
Vps54-202ENSMUST00000109578 Abca8aQ8K442 1620 aa14.76□□□□□ -0.05
Vps54-202ENSMUST00000109578 Zmym3Q9JLM4 1370 aa14.76□□□□□ -0.05
Vps54-202ENSMUST00000109578 Scaf11E9PZM7 1456 aaKnown RBP14.76□□□□□ -0.05
Vps54-202ENSMUST00000109578 Tsen2Q6P7W5 460 aa14.75□□□□□ -0.05
Vps54-202ENSMUST00000109578 PtprtQ99M80 1454 aa14.75□□□□□ -0.05
Vps54-202ENSMUST00000109578 Pnmal2G3X9N3 661 aa14.75□□□□□ -0.05
Vps54-202ENSMUST00000109578 Prex1Q69ZK0 1650 aa14.75□□□□□ -0.05
Vps54-202ENSMUST00000109578 Gm6268A2A3U9 297 aa14.74□□□□□ -0.05
Vps54-202ENSMUST00000109578 Efcab6Q6P1E8 1516 aa14.74□□□□□ -0.05
Vps54-202ENSMUST00000109578 IqubQ8CDK3 788 aa14.74□□□□□ -0.05
Vps54-202ENSMUST00000109578 Cluap1Q8R3P7 413 aa14.74□□□□□ -0.05
Vps54-202ENSMUST00000109578 Adgrb3Q80ZF8 1522 aa14.73□□□□□ -0.05
Vps54-202ENSMUST00000109578 Atp1b4Q99ME6 356 aa14.72□□□□□ -0.05
Vps54-202ENSMUST00000109578 Ppp1r9bQ6R891 817 aaKnown RBP14.72□□□□□ -0.05
Vps54-202ENSMUST00000109578 Exosc9Q9JHI7 438 aaKnown RBP14.72□□□□□ -0.05
Vps54-202ENSMUST00000109578 Myom2Q14BI5 1463 aa14.71□□□□□ -0.05
Vps54-202ENSMUST00000109578 Ptch1Q61115 1434 aa14.71□□□□□ -0.06
Vps54-202ENSMUST00000109578 DnmbpQ6TXD4 1580 aa14.7□□□□□ -0.06
Vps54-202ENSMUST00000109578 Dusp27Q148W8 1138 aa14.7□□□□□ -0.06
Vps54-202ENSMUST00000109578 Iqsec2Q5DU25 1478 aa14.69□□□□□ -0.06
Vps54-202ENSMUST00000109578 Uggt1Q6P5E4 1551 aa14.69□□□□□ -0.06
Vps54-202ENSMUST00000109578 Plcd4Q8K3R3 807 aa14.69□□□□□ -0.06
Vps54-202ENSMUST00000109578 Znf330Q922H9 316 aa14.69□□□□□ -0.06
Vps54-202ENSMUST00000109578 Ehbp1l1Q99MS7 1716 aa14.69□□□□□ -0.06
Vps54-202ENSMUST00000109578 PalldQ9ET54 1408 aa14.68□□□□□ -0.06
Vps54-202ENSMUST00000109578 CenpjQ569L8 1344 aa14.68□□□□□ -0.06
Vps54-202ENSMUST00000109578 Lrrc7Q80TE7 1490 aa14.68□□□□□ -0.06
Vps54-202ENSMUST00000109578 Ppp2r3aB2RXC8 1150 aa14.68□□□□□ -0.06
Vps54-202ENSMUST00000109578 InsrP15208 1372 aa14.68□□□□□ -0.06
Vps54-202ENSMUST00000109578 Gli2Q0VGT2 1544 aa14.67□□□□□ -0.06
Vps54-202ENSMUST00000109578 Ccar1Q8CH18 1146 aaKnown RBP14.67□□□□□ -0.06
Vps54-202ENSMUST00000109578 OvosQ3UU35 1456 aa14.67□□□□□ -0.06
Vps54-202ENSMUST00000109578 Sipa1l1Q8C0T5 1782 aa14.66□□□□□ -0.06
Vps54-202ENSMUST00000109578 KdrP35918 1367 aa14.65□□□□□ -0.06
Vps54-202ENSMUST00000109578 Tnpo1Q8BFY9 898 aaKnown RBP14.65□□□□□ -0.06
Vps54-202ENSMUST00000109578 Fam135bQ9DAI6 1403 aa14.65□□□□□ -0.06
Vps54-202ENSMUST00000109578 Tmc1Q8R4P5 757 aa14.65□□□□□ -0.06
Vps54-202ENSMUST00000109578 Senp3Q9EP97 568 aaKnown RBP14.65□□□□□ -0.06
Vps54-202ENSMUST00000109578 Trpm1Q2TV84 1622 aa14.65□□□□□ -0.06
Vps54-202ENSMUST00000109578 Topbp1Q6ZQF0 1515 aa14.64□□□□□ -0.07
Vps54-202ENSMUST00000109578 Skint5A7XUY5 1461 aa14.64□□□□□ -0.07
Vps54-202ENSMUST00000109578 Shq1Q7TMX5 569 aa14.63□□□□□ -0.07
Vps54-202ENSMUST00000109578 AU019823E9PUQ3 292 aa14.63□□□□□ -0.07
Vps54-202ENSMUST00000109578 Nutm1Q8BHP2 1126 aa14.63□□□□□ -0.07
Vps54-202ENSMUST00000109578 Spryd3E9Q9B3 442 aa14.63□□□□□ -0.07
Vps54-202ENSMUST00000109578 Sptbn5F6UCX4 1208 aa14.62□□□□□ -0.07
Vps54-202ENSMUST00000109578 Slc52a2Q9D8F3 450 aa14.62□□□□□ -0.07
Vps54-202ENSMUST00000109578 Mfap1aC0HKD8 439 aaKnown RBP14.61□□□□□ -0.07
Vps54-202ENSMUST00000109578 Mfap1bC0HKD9 439 aaKnown RBP14.61□□□□□ -0.07
Vps54-202ENSMUST00000109578 Pdlim2Q8R1G6 349 aa14.61□□□□□ -0.07
Vps54-202ENSMUST00000109578 Ccdc60Q8C4J0 545 aa14.61□□□□□ -0.07
Vps54-202ENSMUST00000109578 MaddQ80U28 1577 aa14.61□□□□□ -0.07
Vps54-202ENSMUST00000109578 CastP51125 788 aa14.6□□□□□ -0.07
Vps54-202ENSMUST00000109578 Amer1Q7TS75 1132 aa14.6□□□□□ -0.07
Vps54-202ENSMUST00000109578 Maco1Q7TQE6 664 aaKnown RBP14.6□□□□□ -0.07
Vps54-202ENSMUST00000109578 Nectin2P32507 530 aa14.59□□□□□ -0.07
Vps54-202ENSMUST00000109578 Depdc5P61460 1591 aa14.59□□□□□ -0.07
Vps54-202ENSMUST00000109578 Rbm25B2RY56 838 aaKnown RBP14.58□□□□□ -0.08
Vps54-202ENSMUST00000109578 Tbc1d32Q3URV1 1296 aa14.58□□□□□ -0.08
Vps54-202ENSMUST00000109578 Tecpr2Q3UH45 1423 aa14.58□□□□□ -0.08
Vps54-202ENSMUST00000109578 Hfm1D3Z4R1 1434 aa14.58□□□□□ -0.08
Vps54-202ENSMUST00000109578 Q9D9H8 365 aa14.58□□□□□ -0.08
Vps54-202ENSMUST00000109578 Cfap65Q3V0B4 1847 aa14.57□□□□□ -0.08
Vps54-202ENSMUST00000109578 Aplp1Q03157 653 aa14.57□□□□□ -0.08
Vps54-202ENSMUST00000109578 Atl3Q91YH5 541 aa14.57□□□□□ -0.08
Vps54-202ENSMUST00000109578 Rabep1O35551 862 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms