RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Dnajc14Q921R4 703 aa11.17□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Erbb3Q61526 1339 aa11.16□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 ElnP54320 860 aa11.15□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 NhsB1AV60 1647 aa11.15□□□□□ -0.62
Ccdc47-202ENSMUST00000106865 Igf1rQ60751 1373 aa11.15□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 NclP09405 707 aaKnown RBP11.14□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Map2k7Q8CE90 535 aa11.14□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Trim32Q8CH72 655 aa11.14□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Slc27a5Q4LDG0 689 aa11.13□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Sulf1Q8K007 870 aa11.13□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Spaca7Q9D2S4 182 aa11.13□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Naip2Q9QUK4 1447 aa11.12□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Prr18Q6PAN7 307 aa11.12□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Arid5bQ8BM75 1188 aaKnown RBP11.12□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Adam19O35674 920 aa11.11□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Fam160a1Q505K2 1081 aa11.11□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 FcrlaQ920A9 352 aa11.11□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Pola2P33611 600 aa11.1□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 Rpap1Q80TE0 1409 aa11.09□□□□□ -0.63
Ccdc47-202ENSMUST00000106865 PtprmP28828 1452 aa11.08□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Fnbp4Q6ZQ03 1031 aa11.08□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 RragcQ99K70 398 aa11.08□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Qser1A2BIE1 1698 aa11.08□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Gm7298A0A0N4SVU1 1476 aa11.07□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Lce6aD3YV94 81 aa11.06□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Tie1Q06806 1134 aa11.06□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Setdb2Q8C267 713 aa11.06□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Mroh2bQ7M6Y6 1581 aa11.06□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Kif14L0N7N1 1674 aaKnown RBP11.05□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Abcf1Q6P542 837 aaKnown RBP11.05□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Neurl4Q5NCX5 1563 aa11.04□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Lhx8O35652 367 aa11.04□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Adamtsl3G3UXC7 1706 aa11.04□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Atp10dQ8K2X1 1416 aa11.03□□□□□ -0.64
Ccdc47-202ENSMUST00000106865 Mre11Q61216 706 aa11.02□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Gabbr2Q80T41 940 aa11.02□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Abca8bQ8K440 1620 aa11.01□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 WrnO09053 1401 aa11.01□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Map3k1P53349 1493 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 A2mQ6GQT1 1474 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Adamts19P59509 1210 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Myt1Q8CFC2 1127 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Caskin2Q8VHK1 1201 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 SphkapQ6NSW3 1687 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Gcc2Q8CHG3 1679 aa11□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Nfxl1E9Q8I7 918 aaKnown RBP10.98□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Rnf40Q3U319 1001 aa10.98□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Kiaa1210E9Q0C6 1637 aa10.97□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Mroh2aD3Z750 1679 aa10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Kiaa0556Q8C753 1610 aa10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Ahdc1Q6PAL7 1594 aaKnown RBP10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Ccdc141E9Q8Q6 1531 aa10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Camsap2Q8C1B1 1461 aa10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Dsc3P55850 896 aa10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Ptcd1Q8C2E4 695 aaKnown RBP10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Dph2Q9CR25 489 aa10.96□□□□□ -0.65
Ccdc47-202ENSMUST00000106865 Carmil1Q6EDY6 1374 aa10.95□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Nckap5lQ6GQX2 1323 aa10.95□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 ZfrO88532 1074 aaKnown RBP10.95□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Gigyf2Q6Y7W8 1291 aaKnown RBP10.95□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Arhgap31A6X8Z5 1425 aa10.94□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Scn4aQ9ER60 1841 aa10.94□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Fam221bQ8C627 487 aa10.94□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Pcdhb16Q91Y03 802 aa10.94□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Sall2Q9QX96 1004 aa10.94□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Polr1aO35134 1717 aaKnown RBP10.94□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Synj2Q9D2G5 1434 aa10.93□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Thap8E9Q695 213 aa10.93□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 NntQ61941 1086 aaKnown RBP10.93□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Tbc1d12Q6A039 696 aa10.93□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Abca9Q8K449 1623 aa10.91□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Cdv3Q4VAA2 281 aaKnown RBP10.91□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Supt6hQ62383 1726 aaKnown RBP10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Cul9Q80TT8 1865 aa10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Ankrd34aB2RW11 495 aa10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Usp46P62069 366 aa10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Stk11ipQ3TAA7 1072 aa10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Zfp943Q6NZP4 507 aa10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 ClmQ7TSN2 230 aa10.9□□□□□ -0.66
Ccdc47-202ENSMUST00000106865 Nos2P29477 1144 aa10.89□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Kcnn2P58390 839 aa10.89□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Usp3Q91W36 520 aaKnown RBP10.89□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 LrgukQ9D5S7 820 aa10.89□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Tpcn1Q9EQJ0 817 aa10.89□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Cux1P53564 1515 aa10.88□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Myo1bP46735 1107 aa10.87□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Fancd2Q80V62 1450 aa10.87□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Atp10aO54827 1508 aa10.86□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Nkx2-3P97334 362 aa10.86□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 OvosQ3UU35 1456 aa10.86□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Mlh3A0A1Y7VMP7 1443 aa10.85□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 March10E9PX79 788 aa10.85□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Secisbp2lQ6A098 1086 aaKnown RBP10.85□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Kctd12Q6WVG3 327 aa10.85□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Itgbl1Q8VDV0 494 aa10.85□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Armc3A2AU72 881 aa10.84□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Ppp4cP97470 307 aa10.84□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Igflr1Q3U4N7 345 aa10.84□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Chtf18Q8BIW9 969 aa10.84□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Zmym4A2A791 1549 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms