RNA–Protein interactions for RNA: ENSMUST00000097566.9

Synpo-201, Transcript of Synaptopodin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Synpo, Length 5,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-201ENSMUST00000097566 Ints3Q7TPD0 1041 aaKnown RBP20.03■□□□□ 0.8
Synpo-201ENSMUST00000097566 Rnf20Q5DTM8 973 aa20.03■□□□□ 0.8
Synpo-201ENSMUST00000097566 Tiam1Q60610 1591 aa20.02■□□□□ 0.8
Synpo-201ENSMUST00000097566 Hook1Q8BIL5 728 aa20.02■□□□□ 0.8
Synpo-201ENSMUST00000097566 Fam43aQ8BUP8 424 aa20.02■□□□□ 0.8
Synpo-201ENSMUST00000097566 Cabp4Q8VHC5 271 aa20.02■□□□□ 0.8
Synpo-201ENSMUST00000097566 Ddx11Q6AXC6 880 aa20.02■□□□□ 0.8
Synpo-201ENSMUST00000097566 Tpm1P58771 284 aa20.01■□□□□ 0.79
Synpo-201ENSMUST00000097566 Srek1Q8BZX4 494 aaKnown RBP20.01■□□□□ 0.79
Synpo-201ENSMUST00000097566 PdcQ9QW08 244 aa20.01■□□□□ 0.79
Synpo-201ENSMUST00000097566 Cavin4A2AMM0 362 aa20■□□□□ 0.79
Synpo-201ENSMUST00000097566 Zkscan2G3X952 960 aa20■□□□□ 0.79
Synpo-201ENSMUST00000097566 ErbinQ80TH2 1402 aa20■□□□□ 0.79
Synpo-201ENSMUST00000097566 Puf60Q3UEB3 564 aaKnown RBP20■□□□□ 0.79
Synpo-201ENSMUST00000097566 Rec8Q8C5S7 591 aa20■□□□□ 0.79
Synpo-201ENSMUST00000097566 A0A0U1RNP2 1173 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Arid4aF8VPQ2 1261 aaKnown RBP19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Pde4cQ3UEI1 686 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Gpatch3Q8BIY1 525 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Syce3B5KM66 88 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Cchcr1Q8K2I2 770 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Phldb1Q6PDH0 1371 aaKnown RBP19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 AppP12023 770 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Dusp27Q148W8 1138 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 AnlnQ8K298 1121 aaKnown RBP19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Ubxn4Q8VCH8 506 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 MyclP10166 368 aa19.99■□□□□ 0.79
Synpo-201ENSMUST00000097566 Znhit6Q3UFB2 460 aaKnown RBP19.98■□□□□ 0.79
Synpo-201ENSMUST00000097566 Stk3Q9JI10 497 aa19.98■□□□□ 0.79
Synpo-201ENSMUST00000097566 TimelessQ9R1X4 1197 aa19.98■□□□□ 0.79
Synpo-201ENSMUST00000097566 NexnQ7TPW1 607 aa19.97■□□□□ 0.79
Synpo-201ENSMUST00000097566 Nop14Q8R3N1 860 aaKnown RBP19.97■□□□□ 0.79
Synpo-201ENSMUST00000097566 Mns1Q61884 491 aa19.97■□□□□ 0.79
Synpo-201ENSMUST00000097566 PrxO55103 1391 aa19.97■□□□□ 0.79
Synpo-201ENSMUST00000097566 Cplx1P63040 134 aa19.96■□□□□ 0.79
Synpo-201ENSMUST00000097566 NcapgE9PWG6 1004 aa19.96■□□□□ 0.79
Synpo-201ENSMUST00000097566 Erc2Q6PH08 957 aa19.96■□□□□ 0.79
Synpo-201ENSMUST00000097566 Cplx2P84086 134 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 Sv2bQ8BG39 683 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 Gcc1Q9D4H2 778 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 Nsd2Q8BVE8 1365 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 CastP51125 788 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 Frmd3Q8BHD4 595 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 Ncoa1P70365 1447 aa19.95■□□□□ 0.78
Synpo-201ENSMUST00000097566 Ftsj3Q9DBE9 838 aaKnown RBP19.94■□□□□ 0.78
Synpo-201ENSMUST00000097566 Ccdc47Q9D024 483 aaKnown RBP19.94■□□□□ 0.78
Synpo-201ENSMUST00000097566 Kank1E9Q238 1360 aa19.94■□□□□ 0.78
Synpo-201ENSMUST00000097566 Cd109Q8R422 1442 aa19.94■□□□□ 0.78
Synpo-201ENSMUST00000097566 Cbx1P83917 185 aaKnown RBP19.94■□□□□ 0.78
Synpo-201ENSMUST00000097566 Gm21969J3QJZ1 289 aa19.93■□□□□ 0.78
Synpo-201ENSMUST00000097566 Jakmip1Q8BVL9 626 aa19.93■□□□□ 0.78
Synpo-201ENSMUST00000097566 Wdr78E9PYY5 807 aa19.92■□□□□ 0.78
Synpo-201ENSMUST00000097566 PtprkP35822 1457 aa19.92■□□□□ 0.78
Synpo-201ENSMUST00000097566 Cfdp1O88271 295 aaKnown RBP19.92■□□□□ 0.78
Synpo-201ENSMUST00000097566 Podxl2Q8CAE9 603 aa19.92■□□□□ 0.78
Synpo-201ENSMUST00000097566 Egfem1Q8C088 590 aa19.92■□□□□ 0.78
Synpo-201ENSMUST00000097566 Gsto1O09131 240 aa19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Maco1Q7TQE6 664 aaKnown RBP19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Fam193aQ8CGI1 1231 aaKnown RBP19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Ppip5k2Q6ZQB6 1129 aa19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Znf771Q8BJ90 317 aa19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Mrvi1Q9WUX5 899 aaKnown RBP19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Cnnm3Q32NY4 713 aa19.91■□□□□ 0.78
Synpo-201ENSMUST00000097566 Ipo7Q9EPL8 1038 aaKnown RBP19.9■□□□□ 0.78
Synpo-201ENSMUST00000097566 Map3k1P53349 1493 aa19.9■□□□□ 0.78
Synpo-201ENSMUST00000097566 Neurod6P48986 337 aa19.9■□□□□ 0.78
Synpo-201ENSMUST00000097566 CarsQ9ER72 831 aaKnown RBP19.9■□□□□ 0.78
Synpo-201ENSMUST00000097566 Cwc15Q9JHS9 229 aaKnown RBP19.9■□□□□ 0.78
Synpo-201ENSMUST00000097566 Naip2Q9QUK4 1447 aa19.89■□□□□ 0.78
Synpo-201ENSMUST00000097566 TchhA0A0B4J1F9 1599 aa19.88■□□□□ 0.77
Synpo-201ENSMUST00000097566 Q9D9S1 216 aa19.88■□□□□ 0.77
Synpo-201ENSMUST00000097566 Rab11fip3Q8CHD8 1047 aa19.88■□□□□ 0.77
Synpo-201ENSMUST00000097566 Naip5Q9R016 1403 aa19.88■□□□□ 0.77
Synpo-201ENSMUST00000097566 Dnai2A2AC93 623 aa19.88■□□□□ 0.77
Synpo-201ENSMUST00000097566 NrkQ9R0G8 1455 aa19.88■□□□□ 0.77
Synpo-201ENSMUST00000097566 PhaxQ9JJT9 385 aaKnown RBP19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Fam184aE9PW83 1143 aa19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 TnmdQ9EP64 317 aa19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Ppp1r18Q8BQ30 594 aa19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Psma5Q9Z2U1 241 aaKnown RBP19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Rad54l2Q99NG0 1466 aa19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Rcan3Q9JKK0 239 aa19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Soga1E1U8D0 1418 aa19.87■□□□□ 0.77
Synpo-201ENSMUST00000097566 Jph4Q80WT0 628 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Samm50Q8BGH2 469 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Tmco3Q8BH01 678 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Nphp1Q9QY53 687 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Terf2O35144 541 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Cpa2Q504N0 417 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Evc2Q8K1G2 1220 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Ap3b2Q9JME5 1082 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Gcom1E9PZ54 550 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 MyzapQ3UIJ9 466 aa19.86■□□□□ 0.77
Synpo-201ENSMUST00000097566 Cfap99A0A140LIX9 648 aa19.85■□□□□ 0.77
Synpo-201ENSMUST00000097566 Atxn3Q9CVD2 355 aa19.85■□□□□ 0.77
Synpo-201ENSMUST00000097566 Zrsr2Q62377 462 aaKnown RBP19.85■□□□□ 0.77
Synpo-201ENSMUST00000097566 Krt82Q99M74 516 aa19.85■□□□□ 0.77
Synpo-201ENSMUST00000097566 Ncoa2Q61026 1462 aa19.84■□□□□ 0.77
Synpo-201ENSMUST00000097566 ImpactO55091 318 aa19.84■□□□□ 0.77
Synpo-201ENSMUST00000097566 Polr1aO35134 1717 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms