RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ak7Q9D2H2 614 aa14.72□□□□□ -0.05
Col8a1-201ENSMUST00000089332 Ppp2r1aQ76MZ3 589 aa14.71□□□□□ -0.05
Col8a1-201ENSMUST00000089332 Ccdc141E9Q8Q6 1531 aa14.71□□□□□ -0.05
Col8a1-201ENSMUST00000089332 Cavin4A2AMM0 362 aa14.71□□□□□ -0.05
Col8a1-201ENSMUST00000089332 Nectin2P32507 530 aa14.71□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Mre11Q61216 706 aa14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Plekhh1Q80TI1 1356 aa14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Sf3b2Q3UJB0 878 aaKnown RBP14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Gimap6Q8K349 305 aa14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 TefQ9JLC6 301 aa14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Smg7Q5RJH6 1138 aaKnown RBP14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Phactr2B1AVP0 632 aa14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 BcanQ61361 883 aa14.7□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Evi5lH3BKQ3 813 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Mphosph10Q810V0 681 aaKnown RBP14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Rec8Q8C5S7 591 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Smc3Q9CW03 1217 aaKnown RBP14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Rab3gap2Q8BMG7 1366 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Rfx1P48377 963 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Bcl2l13P59017 434 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Mcm2P97310 904 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Afap1Q80YS6 731 aa14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Noc3lQ8VI84 807 aaKnown RBP14.69□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Rabep1O35551 862 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Hmox1P14901 289 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 VgfQ0VGU4 617 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 PsapQ61207 557 aaKnown RBP14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Cchcr1Q8K2I2 770 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Bicd2Q921C5 820 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Gpatch11Q3UFS4 262 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Plb1Q3TTY0 1478 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Gabpb2P81069 414 aa14.68□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Zfp444Q3TDV8 331 aaKnown RBP14.67□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Nutm1Q8BHP2 1126 aa14.67□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Prkrip1Q9CWV6 186 aaKnown RBP14.67□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Il16O54824 1322 aa14.67□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Hook1Q8BIL5 728 aa14.67□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Hap1O35668 628 aa14.66□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Gtf3c3Q3TMP1 882 aa14.66□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Cyp46a1Q9WVK8 500 aa14.66□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Kif3aP28741 701 aa14.66□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Apaf1O88879 1249 aa14.66□□□□□ -0.06
Col8a1-201ENSMUST00000089332 BicraF8VPZ9 1578 aa14.65□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Cnnm1Q0GA42 951 aa14.65□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Trim29Q8R2Q0 587 aa14.65□□□□□ -0.06
Col8a1-201ENSMUST00000089332 KarsQ99MN1 595 aaKnown RBP14.65□□□□□ -0.06
Col8a1-201ENSMUST00000089332 Gm21698A0A087WQP8 267 aa14.64□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Plekhd1B2RPU2 505 aa14.64□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Gm21671G3UY31 267 aa14.64□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Lrrcc1Q69ZB0 1026 aa14.64□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Ccdc43Q9CR29 222 aaKnown RBP14.64□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Psma5Q9Z2U1 241 aaKnown RBP14.64□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Me1P06801 572 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 OptnQ8K3K8 584 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 SetQ9EQU5 289 aaKnown RBP14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Utp3Q9JI13 469 aaKnown RBP14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Plekhg5Q66T02 1073 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Dennd6aQ8BH65 605 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 TkfcQ8VC30 578 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Ush1cQ9ES64 910 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Top2bQ64511 1612 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Map7d2A2AG50 781 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Zkscan2G3X952 960 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Kif4P33174 1231 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Stard3nlQ9DCI3 235 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 MpripP97434 1024 aa14.63□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Cdk19Q8BWD8 501 aa14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Camsap1A2AHC3 1581 aa14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Cfap99A0A140LIX9 648 aa14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 SkilQ60665 675 aa14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Gpatch3Q8BIY1 525 aa14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Rbm5Q91YE7 815 aaKnown RBP14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Gripap1Q8VD04 806 aa14.62□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Ttll13A4Q9F6 804 aa14.61□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Ddx54Q8K4L0 874 aaKnown RBP14.61□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Prl7d1P04769 244 aa14.61□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Nek4Q9Z1J2 792 aa14.61□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Slc52a2Q9D8F3 450 aa14.6□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Ints3Q7TPD0 1041 aaKnown RBP14.6□□□□□ -0.07
Col8a1-201ENSMUST00000089332 GphnQ8BUV3 769 aaKnown RBP14.6□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Polr3gQ6NXY9 223 aa14.59□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Fkbp4P30416 458 aa14.59□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Gnai2P08752 355 aaKnown RBP14.59□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Igf1rQ60751 1373 aa14.58□□□□□ -0.07
Col8a1-201ENSMUST00000089332 March6Q6ZQ89 909 aa14.58□□□□□ -0.07
Col8a1-201ENSMUST00000089332 Eif3aP23116 1344 aaKnown RBP14.58□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Hmgn5Q9JL35 406 aa14.58□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Mug1P28665 1476 aa14.58□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Ccdc183A2AJB1 534 aa14.58□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Taok2Q6ZQ29 1240 aa14.58□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Rbm28Q8CGC6 750 aaKnown RBP14.58□□□□□ -0.08
Col8a1-201ENSMUST00000089332 ZgpatQ8VDM1 511 aa14.57□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Odf2lQ9D478 642 aa14.57□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Naip2Q9QUK4 1447 aa14.57□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Wdr62Q3U3T8 1523 aa14.57□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Agtpbp1Q641K1 1218 aa14.57□□□□□ -0.08
Col8a1-201ENSMUST00000089332 4930572O03RikQ8C5Y0 211 aa14.57□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Nphp1Q9QY53 687 aa14.56□□□□□ -0.08
Col8a1-201ENSMUST00000089332 IbtkQ6ZPR6 1352 aaKnown RBP14.56□□□□□ -0.08
Col8a1-201ENSMUST00000089332 Hoxa7P02830 229 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms