RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Trpm2Q91YD4 1506 aa12.31□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Col17a1Q07563 1470 aa12.31□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Zranb1Q7M760 708 aa12.31□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Zmym4A2A791 1549 aaKnown RBP12.3□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Smc5Q8CG46 1101 aaKnown RBP12.3□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Cfap74Q3UY96 1578 aa12.3□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Tnpo1Q8BFY9 898 aaKnown RBP12.3□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Q9D9H8 365 aa12.3□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Rfx1P48377 963 aa12.29□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Abcc6Q9R1S7 1498 aa12.29□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Kif21bQ9QXL1 1668 aa12.28□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Trim44Q9QXA7 346 aa12.28□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Pibf1E9Q6K3 756 aa12.28□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Mast1Q9R1L5 1570 aa12.27□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Nkx1-2P42580 305 aa12.26□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 AU015836B2RUM3 263 aa12.25□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 KnstrnQ9D9Z1 312 aaKnown RBP12.25□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Usp54Q8BL06 1588 aaKnown RBP12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Ppp2r3aB2RXC8 1150 aa12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 G3bp1P97855 465 aaKnown RBP12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Dusp27Q148W8 1138 aa12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Txndc2Q6P902 515 aa12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Afap1Q80YS6 731 aa12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Atp2b2Q9R0K7 1198 aa12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Kdm5cP41230 1554 aa12.24□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Ccdc146E9Q9F7 977 aa12.23□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 SlkO54988 1233 aa12.23□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 OvosQ3UU35 1456 aa12.22□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Cald1E9QA15 768 aaKnown RBP12.22□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Stk11ipQ3TAA7 1072 aa12.22□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Kif1bQ60575 1816 aaKnown RBP12.22□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Rabep1O35551 862 aa12.21□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Psme1P97371 249 aa12.21□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Gm32742A0A1B0GT42 1604 aa12.21□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Zcchc11B2RX14 1644 aaKnown RBP12.21□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Ppip5k1A2ARP1 1436 aa12.21□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 PtmaP26350 111 aa12.21□□□□□ -0.45
Pcdh1-201ENSMUST00000057185 Tulp4Q9JIL5 1547 aa12.21□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Rbm25B2RY56 838 aaKnown RBP12.21□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Gm16486A0A1D5RMD1 1434 aa12.21□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 AatkQ80YE4 1365 aa12.2□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Ythdc1E9Q5K9 736 aaKnown RBP12.2□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Rnf17Q99MV7 1640 aa12.2□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Gsto1O09131 240 aa12.2□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Kdm2bQ6P1G2 1309 aa12.2□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Duxf3A0A0N4SV92 674 aa12.19□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Uspl1Q3ULM6 1089 aa12.19□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Sbno1Q689Z5 1390 aa12.19□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Cog6Q8R3I3 657 aa12.18□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Ptch1Q61115 1434 aa12.18□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Cc2d1aQ8K1A6 943 aa12.18□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Sptbn5F6UCX4 1208 aa12.17□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Ppp1r9bQ6R891 817 aaKnown RBP12.17□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Tex14Q7M6U3 1450 aa12.17□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Sox12Q04890 314 aa12.17□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Iqgap1Q9JKF1 1657 aaKnown RBP12.17□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Cdk19Q8BWD8 501 aa12.16□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Rlbp1Q9Z275 317 aa12.16□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Adamts13Q769J6 1426 aa12.16□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Maco1Q7TQE6 664 aaKnown RBP12.16□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Chmp4cQ9D7F7 232 aa12.16□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Atl3Q91YH5 541 aa12.16□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Cdc42bpbQ7TT50 1713 aa12.15□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Znf692Q3U381 531 aa12.15□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Aplp1Q03157 653 aa12.15□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Erich6bQ9D4S6 220 aa12.15□□□□□ -0.46
Pcdh1-201ENSMUST00000057185 Slc52a2Q9D8F3 450 aa12.15□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Abcc3B2RX12 1523 aa12.15□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Pnmal2G3X9N3 661 aa12.14□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Kif18aQ91WD7 886 aa12.14□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Ppp1r3fQ9JIG4 799 aa12.14□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Atf7ipQ7TT18 1306 aa12.14□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Triml2E9PW10 424 aa12.14□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Tnnt1O88346 262 aa12.14□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Taok2Q6ZQ29 1240 aa12.13□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Nek4Q9Z1J2 792 aa12.13□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 NhsB1AV60 1647 aa12.13□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Hsp90b1P08113 802 aaKnown RBP12.13□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Usp16Q99LG0 825 aa12.13□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 AU022751B1B0V2 589 aa12.12□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Map4k4P97820 1233 aaKnown RBP12.12□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 SkilQ60665 675 aa12.12□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Gli2Q0VGT2 1544 aa12.12□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Cavin4A2AMM0 362 aa12.12□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Depdc5P61460 1591 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Ssh1Q76I79 1042 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Swt1Q9DBQ9 907 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Chd1P40201 1711 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Znf518aB2RRF6 1478 aaKnown RBP12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Chmp4bQ9D8B3 224 aaKnown RBP12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Myo3aQ8K3H5 1613 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Plch2A2AP18 1501 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Ak9G3UYQ4 1894 aa12.11□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Tfip11Q9ERA6 838 aaKnown RBP12.1□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 PalmQ9Z0P4 383 aa12.1□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 HnrnpuQ8VEK3 800 aaKnown RBP12.1□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 TnikP83510 1323 aa12.1□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Nphp4P59240 1425 aa12.1□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Abca8bQ8K440 1620 aa12.1□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Rsph3aQ3UFY4 516 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms