RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Tfip11Q9ERA6 838 aaKnown RBP18.85■□□□□ 0.61
Usp4-201ENSMUST00000035237 Nsd2Q8BVE8 1365 aa18.85■□□□□ 0.61
Usp4-201ENSMUST00000035237 Caskin1Q6P9K8 1431 aa18.85■□□□□ 0.61
Usp4-201ENSMUST00000035237 Arhgef11Q68FM7 1552 aa18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 Trappc8E9PWG2 1437 aa18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 Puf60Q3UEB3 564 aaKnown RBP18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 SkilQ60665 675 aa18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 U2surpQ6NV83 1029 aaKnown RBP18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 Pdlim2Q8R1G6 349 aa18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 Adamts12Q811B3 1600 aa18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 Usp19Q3UJD6 1360 aa18.84■□□□□ 0.61
Usp4-201ENSMUST00000035237 Gm16486A0A1D5RMD1 1434 aa18.83■□□□□ 0.61
Usp4-201ENSMUST00000035237 Maco1Q7TQE6 664 aaKnown RBP18.83■□□□□ 0.6
Usp4-201ENSMUST00000035237 Nek4Q9Z1J2 792 aa18.82■□□□□ 0.6
Usp4-201ENSMUST00000035237 Dot1lQ6XZL8 1540 aa18.82■□□□□ 0.6
Usp4-201ENSMUST00000035237 VgfQ0VGU4 617 aa18.82■□□□□ 0.6
Usp4-201ENSMUST00000035237 Mrc2Q64449 1479 aa18.82■□□□□ 0.6
Usp4-201ENSMUST00000035237 Plch2A2AP18 1501 aa18.81■□□□□ 0.6
Usp4-201ENSMUST00000035237 Lrrc9Q8CDN9 1456 aa18.81■□□□□ 0.6
Usp4-201ENSMUST00000035237 Phlpp2Q8BXA7 1320 aa18.81■□□□□ 0.6
Usp4-201ENSMUST00000035237 Rbm25B2RY56 838 aaKnown RBP18.8■□□□□ 0.6
Usp4-201ENSMUST00000035237 ErbinQ80TH2 1402 aa18.8■□□□□ 0.6
Usp4-201ENSMUST00000035237 AU019823E9PUQ3 292 aa18.8■□□□□ 0.6
Usp4-201ENSMUST00000035237 Map4k4P97820 1233 aaKnown RBP18.8■□□□□ 0.6
Usp4-201ENSMUST00000035237 Sbno1Q689Z5 1390 aa18.79■□□□□ 0.6
Usp4-201ENSMUST00000035237 Prdm16A2A935 1275 aa18.79■□□□□ 0.6
Usp4-201ENSMUST00000035237 Arid3cA6PWV5 409 aa18.79■□□□□ 0.6
Usp4-201ENSMUST00000035237 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Usp4-201ENSMUST00000035237 Casq1O09165 405 aa18.78■□□□□ 0.6
Usp4-201ENSMUST00000035237 Chmp4cQ9D7F7 232 aa18.77■□□□□ 0.59
Usp4-201ENSMUST00000035237 Zmym3Q9JLM4 1370 aa18.77■□□□□ 0.59
Usp4-201ENSMUST00000035237 Neo1P97798 1493 aa18.76■□□□□ 0.59
Usp4-201ENSMUST00000035237 PogkQ80TC5 607 aa18.76■□□□□ 0.59
Usp4-201ENSMUST00000035237 Antxr1Q9CZ52 562 aa18.76■□□□□ 0.59
Usp4-201ENSMUST00000035237 Birc3O08863 600 aa18.75■□□□□ 0.59
Usp4-201ENSMUST00000035237 Nsfl1cQ9CZ44 370 aaKnown RBP18.75■□□□□ 0.59
Usp4-201ENSMUST00000035237 Pdia4P08003 638 aaKnown RBP18.75■□□□□ 0.59
Usp4-201ENSMUST00000035237 Tarbp1E9Q368 1579 aa18.74■□□□□ 0.59
Usp4-201ENSMUST00000035237 Kiaa1551Q5DTW7 1521 aa18.74■□□□□ 0.59
Usp4-201ENSMUST00000035237 Ush1cQ9ES64 910 aa18.73■□□□□ 0.59
Usp4-201ENSMUST00000035237 Kiaa1107Q80TK0 1369 aa18.73■□□□□ 0.59
Usp4-201ENSMUST00000035237 Rnf214Q8BFU3 668 aaKnown RBP18.72■□□□□ 0.59
Usp4-201ENSMUST00000035237 Gapvd1Q6PAR5 1458 aa18.71■□□□□ 0.59
Usp4-201ENSMUST00000035237 Mapkbp1Q6NS57 1503 aa18.71■□□□□ 0.59
Usp4-201ENSMUST00000035237 Chmp4bQ9D8B3 224 aaKnown RBP18.71■□□□□ 0.59
Usp4-201ENSMUST00000035237 Lemd3Q9WU40 921 aa18.71■□□□□ 0.59
Usp4-201ENSMUST00000035237 Becn1O88597 448 aa18.7■□□□□ 0.58
Usp4-201ENSMUST00000035237 Pibf1E9Q6K3 756 aa18.69■□□□□ 0.58
Usp4-201ENSMUST00000035237 Cdc42bpaQ3UU96 1719 aa18.69■□□□□ 0.58
Usp4-201ENSMUST00000035237 CenpjQ569L8 1344 aa18.69■□□□□ 0.58
Usp4-201ENSMUST00000035237 Isy1Q69ZQ2 285 aaKnown RBP18.69■□□□□ 0.58
Usp4-201ENSMUST00000035237 Q4VA45 678 aa18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Zranb1Q7M760 708 aa18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Zfp777B9EKF4 885 aa18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Triml2E9PW10 424 aa18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Eif4g3Q80XI3 1579 aaKnown RBP18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Tpm2P58774 284 aa18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Dmrtc1Q9D9R7 182 aa18.68■□□□□ 0.58
Usp4-201ENSMUST00000035237 Trpm2Q91YD4 1506 aa18.67■□□□□ 0.58
Usp4-201ENSMUST00000035237 Eif4g2Q62448 906 aaKnown RBP18.67■□□□□ 0.58
Usp4-201ENSMUST00000035237 HnrnpuQ8VEK3 800 aaKnown RBP18.67■□□□□ 0.58
Usp4-201ENSMUST00000035237 Cavin4A2AMM0 362 aa18.67■□□□□ 0.58
Usp4-201ENSMUST00000035237 Adgrl2Q8JZZ7 1487 aa18.66■□□□□ 0.58
Usp4-201ENSMUST00000035237 Gm14025A2AP89 1413 aa18.66■□□□□ 0.58
Usp4-201ENSMUST00000035237 Znf316Q6PGE4 1016 aa18.66■□□□□ 0.58
Usp4-201ENSMUST00000035237 Abca16E9PWJ7 1678 aa18.66■□□□□ 0.58
Usp4-201ENSMUST00000035237 Hsp90b1P08113 802 aaKnown RBP18.65■□□□□ 0.58
Usp4-201ENSMUST00000035237 Tbc1d9Q3UYK3 1264 aa18.65■□□□□ 0.58
Usp4-201ENSMUST00000035237 Fam135bQ9DAI6 1403 aa18.65■□□□□ 0.58
Usp4-201ENSMUST00000035237 Cetn4Q8K4K1 168 aa18.65■□□□□ 0.58
Usp4-201ENSMUST00000035237 CastP51125 788 aa18.64■□□□□ 0.58
Usp4-201ENSMUST00000035237 Edc4Q3UJB9 1406 aaKnown RBP18.64■□□□□ 0.58
Usp4-201ENSMUST00000035237 Fmn2Q9JL04 1578 aa18.64■□□□□ 0.58
Usp4-201ENSMUST00000035237 Cc2d1aQ8K1A6 943 aa18.64■□□□□ 0.57
Usp4-201ENSMUST00000035237 Znf521Q6KAS7 1311 aa18.64■□□□□ 0.57
Usp4-201ENSMUST00000035237 Swt1Q9DBQ9 907 aa18.63■□□□□ 0.57
Usp4-201ENSMUST00000035237 Fancd2Q80V62 1450 aa18.63■□□□□ 0.57
Usp4-201ENSMUST00000035237 Pcmtd1P59913 357 aa18.63■□□□□ 0.57
Usp4-201ENSMUST00000035237 Casc1Q6TDU8 730 aa18.63■□□□□ 0.57
Usp4-201ENSMUST00000035237 Irx6Q9ER75 438 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Ttc21bQ0HA38 1315 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Col17a1Q07563 1470 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Gm10093D3YYI8 482 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Hdac1O09106 482 aaKnown RBP18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Tnnt2P50752 301 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Bag4Q8CI61 457 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 AI481877A2ALV5 1481 aa18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 Iqgap1Q9JKF1 1657 aaKnown RBP18.62■□□□□ 0.57
Usp4-201ENSMUST00000035237 CarsQ9ER72 831 aaKnown RBP18.61■□□□□ 0.57
Usp4-201ENSMUST00000035237 Brd1E9PZ26 1189 aaKnown RBP18.61■□□□□ 0.57
Usp4-201ENSMUST00000035237 Nup160Q9Z0W3 1402 aaKnown RBP18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 1700010I14RikQ7TPG0 532 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 Q9D2X8 372 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 P2rx7Q9Z1M0 595 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 Abcc6Q9R1S7 1498 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 Bloc1s4Q8VED2 215 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 Usp16Q99LG0 825 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 Ccdc171E9Q1U1 1324 aa18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 IbtkQ6ZPR6 1352 aaKnown RBP18.6■□□□□ 0.57
Usp4-201ENSMUST00000035237 Wdr63B2RY71 923 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms