RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Dhx16G3X8X0 1044 aaKnown RBP20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 CrcpO35427 148 aa20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 HypkQ9CR41 129 aa20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Chmp4cQ9D7F7 232 aa20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Vps53Q8CCB4 832 aa20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Il16O54824 1322 aa20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Bcl2l13P59017 434 aa20.11■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Cchcr1Q8K2I2 770 aa20.1■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Kri1Q8VDQ9 704 aaKnown RBP20.1■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Gm10471E9Q1C7 252 aa20.1■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Gabpb2P81069 414 aa20.09■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Rec8Q8C5S7 591 aa20.09■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Mphosph10Q810V0 681 aaKnown RBP20.09■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 A0A1L1SQF0 893 aa20.08■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 PogkQ80TC5 607 aa20.08■□□□□ 0.81
Ubfd1-201ENSMUST00000033158 Zkscan2G3X952 960 aa20.08■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Tomm22Q9CPQ3 142 aa20.08■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Atf3Q60765 181 aa20.07■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Tpm2P58774 284 aa20.07■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Ipo7Q9EPL8 1038 aaKnown RBP20.07■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Gnl3lQ6PGG6 577 aaKnown RBP20.06■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Sirt1Q923E4 737 aa20.05■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 PtprkP35822 1457 aa20.05■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 MpripP97434 1024 aa20.05■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Mad1l1Q9WTX8 717 aaKnown RBP20.05■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Dusp27Q148W8 1138 aa20.04■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Tpm4Q6IRU2 248 aa20.04■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 1700010I14RikQ7TPG0 532 aa20.04■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Ubap1lG3UW59 384 aa20.04■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Isy1Q69ZQ2 285 aaKnown RBP20.04■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Ints3Q7TPD0 1041 aaKnown RBP20.04■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 BcanQ61361 883 aa20.03■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Ccp110Q7TSH4 1004 aa20.03■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Tnpo1Q8BFY9 898 aaKnown RBP20.03■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Nol12Q8BG17 217 aa20.03■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 CadpsQ80TJ1 1355 aa20.03■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Psma5Q9Z2U1 241 aaKnown RBP20.02■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Tiam1Q60610 1591 aa20.02■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 SetQ9EQU5 289 aaKnown RBP20.02■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 Gpatch3Q8BIY1 525 aa20.02■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 EprsQ8CGC7 1512 aaKnown RBP20.02■□□□□ 0.8
Ubfd1-201ENSMUST00000033158 PsapQ61207 557 aaKnown RBP20.02■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Zpr1Q62384 459 aa20.02■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Zranb3Q6NZP1 1069 aa20.02■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Stk3Q9JI10 497 aa20.01■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Gm14025A2AP89 1413 aa20.01■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Kif3aP28741 701 aa20.01■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Cdk19Q8BWD8 501 aa20.01■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Hmgn5Q9JL35 406 aa20.01■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Gnai2P08752 355 aaKnown RBP20■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Usp48Q3V0C5 1052 aa20■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Taok2Q6ZQ29 1240 aa20■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Afap1Q80YS6 731 aa20■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Ccdc141E9Q8Q6 1531 aa20■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Cfap99A0A140LIX9 648 aa20■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Washc2Q6PGL7 1334 aa19.99■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Hook1Q8BIL5 728 aa19.99■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 FosbP13346 338 aa19.99■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Eva1cP58659 440 aa19.99■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Ccdc173A0JLY1 547 aa19.99■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Gcc1Q9D4H2 778 aa19.99■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Nphp1Q9QY53 687 aa19.98■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Ppm1fQ8CGA0 452 aa19.98■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Hnrnpul1Q8VDM6 859 aaKnown RBP19.98■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Cabp2Q9JLK4 216 aa19.98■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Me1P06801 572 aa19.97■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 TefQ9JLC6 301 aa19.97■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Fkbp4P30416 458 aa19.97■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Drc7Q6V3W6 876 aa19.97■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Fmnl2A2APV2 1086 aa19.96■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Cnnm1Q0GA42 951 aa19.96■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Stk11ipQ3TAA7 1072 aa19.96■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 Rnf214Q8BFU3 668 aaKnown RBP19.96■□□□□ 0.79
Ubfd1-201ENSMUST00000033158 AnlnQ8K298 1121 aaKnown RBP19.95■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Ubxn4Q8VCH8 506 aa19.95■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Bcl11bQ99PV8 884 aa19.95■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 UvssaQ9D479 717 aa19.95■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Mrc2Q64449 1479 aa19.94■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Noc3lQ8VI84 807 aaKnown RBP19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Slc52a2Q9D8F3 450 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 PrxO55103 1391 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Fchsd2Q3USJ8 740 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Taf3Q5HZG4 932 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Trim29Q8R2Q0 587 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Frmpd1A2AKB4 1549 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Pip4k2bQ80XI4 416 aa19.93■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Smg7Q5RJH6 1138 aaKnown RBP19.92■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Zkscan1Q8BGS3 561 aaKnown RBP19.92■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Dennd6aQ8BH65 605 aa19.92■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Cog6Q8R3I3 657 aa19.92■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 EzrP26040 586 aaKnown RBP19.92■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Dixdc1Q80Y83 711 aa19.92■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Q9D9S1 216 aa19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Map7d2A2AG50 781 aa19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Gimap6Q8K349 305 aa19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 OptnQ8K3K8 584 aa19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Kif18aQ91WD7 886 aa19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 NaspQ99MD9 773 aaKnown RBP19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Stard3nlQ9DCI3 235 aa19.91■□□□□ 0.78
Ubfd1-201ENSMUST00000033158 Hap1O35668 628 aa19.9■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 73.6 ms