RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 AglF8VPN4 1532 aa11.99□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 ZfrO88532 1074 aaKnown RBP11.98□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Slain2Q8CI08 581 aa11.98□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Cdca7lQ922M5 438 aa11.98□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Bcl11bQ99PV8 884 aa11.98□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Jph1Q9ET80 660 aa11.98□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Kdm6bQ5NCY0 1641 aa11.97□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Mlh3A0A1Y7VMP7 1443 aa11.97□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 FurinP23188 793 aa11.97□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Retreg3Q9CQV4 466 aa11.97□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 AdgbG3UZ78 1657 aa11.97□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Adcy10Q8C0T9 1614 aa11.97□□□□□ -0.49
Ssbp1-201ENSMUST00000031971 Trappc8E9PWG2 1437 aa11.95□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Fndc1E9Q043 1732 aa11.95□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Rhox13F6YCR7 232 aa11.95□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Trim32Q8CH72 655 aa11.95□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Rnf17Q99MV7 1640 aa11.95□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 3425401B19RikD3Z1D3 1412 aa11.94□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Gm32742A0A1B0GT42 1604 aa11.94□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Tdrd9Q14BI7 1383 aa11.93□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Arhgap5P97393 1501 aa11.93□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Ppp4cP97470 307 aa11.93□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Rgs9O54828 675 aa11.92□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Slc7a3P70423 618 aa11.92□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Q9CQ90 155 aa11.91□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 SmapQ9R0P4 181 aaKnown RBP11.91□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Kidins220E9Q9B7 1793 aa11.91□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Ciz1Q8VEH2 845 aa11.9□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Irx6Q9ER75 438 aa11.9□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Abcc3B2RX12 1523 aa11.9□□□□□ -0.5
Ssbp1-201ENSMUST00000031971 Slc4a9E9PUP3 929 aa11.89□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Adra2bP30545 450 aa11.89□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Traf7Q922B6 594 aa11.89□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Tie1Q06806 1134 aa11.88□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Tmub1Q9JMG3 245 aa11.88□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Caskin1Q6P9K8 1431 aa11.87□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Supt5hO55201 1082 aaKnown RBP11.86□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Arid5bQ8BM75 1188 aaKnown RBP11.86□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Pdcd11Q6NS46 1862 aaKnown RBP11.86□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 E2f4Q8R0K9 410 aa11.85□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Kiaa0556Q8C753 1610 aa11.85□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Hs1bp3Q3TC93 395 aa11.84□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Pxylp1Q8BHA9 480 aa11.84□□□□□ -0.51
Ssbp1-201ENSMUST00000031971 Gm4788E9Q8B5 879 aa11.83□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 UbtfP25976 765 aaKnown RBP11.83□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Kcnn2P58390 839 aa11.83□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Ptch1Q61115 1434 aa11.83□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Abcc5Q9R1X5 1436 aa11.83□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Cfap74Q3UY96 1578 aa11.83□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Aldh16a1Q571I9 802 aa11.82□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Wdr44Q6NVE8 915 aa11.82□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Yeats2Q3TUF7 1407 aa11.82□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Cdc42bpbQ7TT50 1713 aa11.82□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Sart1Q9Z315 806 aaKnown RBP11.81□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Kdm5cP41230 1554 aa11.8□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Rpusd2Q149F1 553 aa11.8□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 OvosQ3UU35 1456 aa11.8□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Dip2cE9PWR4 1557 aa11.79□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Hecw2Q6I6G8 1578 aa11.79□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Alkbh8Q80Y20 664 aa11.79□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Synj2Q9D2G5 1434 aa11.78□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Rnf40Q3U319 1001 aa11.78□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Caskin2Q8VHK1 1201 aa11.78□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Lemd3Q9WU40 921 aa11.78□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 Map3k5O35099 1380 aa11.78□□□□□ -0.52
Ssbp1-201ENSMUST00000031971 RereQ80TZ9 1558 aa11.77□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Cabp1Q9JLK7 227 aa11.77□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Qser1A2BIE1 1698 aa11.77□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 SphkapQ6NSW3 1687 aa11.77□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Irf6P97431 467 aa11.76□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Chic2Q9D9G3 165 aa11.76□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Ncapd3Q6ZQK0 1506 aa11.76□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Adgrb2Q8CGM1 1561 aa11.75□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Alpk3Q924C5 1678 aa11.75□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Znf423Q80TS5 1292 aa11.75□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Naip2Q9QUK4 1447 aa11.75□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Atp10aO54827 1508 aa11.75□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Plekhh2Q8C115 1491 aa11.74□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Mtus2Q3UHD3 1353 aa11.73□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Hecw1Q8K4P8 1604 aa11.73□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Cul9Q80TT8 1865 aa11.72□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Mast1Q9R1L5 1570 aa11.72□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Nos1Q9Z0J4 1429 aa11.72□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Ankrd34aB2RW11 495 aa11.72□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Cdk11bP24788 784 aaKnown RBP11.72□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Xrn1P97789 1719 aaKnown RBP11.72□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Kdm3bQ6ZPY7 1562 aa11.71□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Dennd4bQ3U1Y4 1499 aa11.71□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Sp7Q8VI67 428 aa11.71□□□□□ -0.53
Ssbp1-201ENSMUST00000031971 Fmn2Q9JL04 1578 aa11.71□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Adamtsl3G3UXC7 1706 aa11.7□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Slc24a3Q99PD7 645 aa11.7□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Il16O54824 1322 aa11.69□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Rrp7aQ9D1C9 280 aaKnown RBP11.69□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Mllt3A2AM29 569 aa11.68□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Large2Q5XPT3 690 aa11.68□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Map3k7Q62073 579 aa11.68□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Dph2Q9CR25 489 aa11.68□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Neurl4Q5NCX5 1563 aa11.67□□□□□ -0.54
Ssbp1-201ENSMUST00000031971 Zmym4A2A791 1549 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms