RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ipo7Q9EPL8 1038 aaKnown RBP5.59□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Plxnc1Q9QZC2 1574 aa5.59□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Skint5A7XUY5 1461 aa5.59□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Zrsr2Q62377 462 aaKnown RBP5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 PaskQ8CEE6 1383 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Rtn4Q99P72 1162 aaKnown RBP5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Arhgef11Q68FM7 1552 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Cfap65Q3V0B4 1847 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 ArxO35085 564 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kif3cO35066 796 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Trim58Q5NCC9 485 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Evc2Q8K1G2 1220 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Chmp4cQ9D7F7 232 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Q8BT18 775 aa5.58□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Tpm1P58771 284 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Clasp1Q80TV8 1535 aaKnown RBP5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kif3bQ61771 747 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Cetn4Q8K4K1 168 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Rabep1O35551 862 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 TnikP83510 1323 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Tpm4Q6IRU2 248 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Tex2Q6ZPJ0 1128 aaKnown RBP5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Hmgn5Q9JL35 406 aa5.57□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kdm2aP59997 1161 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kiaa0754Q69ZZ9 979 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ftsj3Q9DBE9 838 aaKnown RBP5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Hfm1D3Z4R1 1434 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Fam184aE9PW83 1143 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Eif4g3Q80XI3 1579 aaKnown RBP5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kank1E9Q238 1360 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Sh3bp5Q9Z131 463 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Hmgb1P63158 215 aaKnown RBP5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Rad21Q61550 635 aaKnown RBP5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 GsdmaQ9EST1 446 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Rtf1A2AQ19 715 aaKnown RBP5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ccdc34Q3UI66 367 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Chaf1aQ9QWF0 911 aa5.56□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Mug2P28666 1451 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 InsrP15208 1372 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Map4k4P97820 1233 aaKnown RBP5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ncoa3O09000 1398 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Gripap1Q8VD04 806 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Lrrcc1Q69ZB0 1026 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 St18Q80TY4 1045 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Srek1Q8BZX4 494 aaKnown RBP5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ifnlr1Q8CGK5 535 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Atp10dQ8K2X1 1416 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Elp1Q7TT37 1333 aaKnown RBP5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ttll5Q8CHB8 1328 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Anapc15P60007 132 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Rad17Q6NXW6 688 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Slc4a1apE9PX68 744 aa5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ctr9Q62018 1173 aaKnown RBP5.55□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Tmx4Q8C0L0 335 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 P3h3Q8CG70 732 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Hmgb3O54879 200 aaKnown RBP5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 OvosQ3UU35 1456 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Cplx2P84086 134 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kif7B7ZNG0 1348 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Gnai1B2RSH2 354 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Gnai3Q9DC51 354 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Tnnt1O88346 262 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Arglu1Q3UL36 271 aaKnown RBP5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Noc3lQ8VI84 807 aaKnown RBP5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Dcaf11Q91VU6 549 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Mbd5B1AYB6 1498 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Abca16E9PWJ7 1678 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Pde4cQ3UEI1 686 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Ppp1r18Q8BQ30 594 aa5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 NaspQ99MD9 773 aaKnown RBP5.54□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Rims1Q99NE5 1463 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Wwc1Q5SXA9 1104 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Pank3Q8R2W9 370 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Hook1Q8BIL5 728 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 IbtkQ6ZPR6 1352 aaKnown RBP5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Abca8bQ8K440 1620 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Odf2A3KGV1 830 aaKnown RBP5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 UvssaQ9D479 717 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Fam208aQ69ZR9 1610 aaKnown RBP5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Cul9Q80TT8 1865 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Cdkn1cP49919 348 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Fchsd2Q3USJ8 740 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Tubb6Q922F4 447 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Speer4f1Q9D5Q6 258 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Gse1Q3U3C9 1213 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 PxdnQ3UQ28 1475 aa5.53□□□□□ -1.52
Prkdc-201ENSMUST00000023352 Kif4P33174 1231 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gtpbp4Q99ME9 634 aaKnown RBP5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Trpm2Q91YD4 1506 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Casq1O09165 405 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Smc4Q8CG47 1286 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ak9G3UYQ4 1894 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Efcab6Q6P1E8 1516 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cavin4A2AMM0 362 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 SrrtQ99MR6 875 aaKnown RBP5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Dctn1O08788 1281 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Fam135bQ9DAI6 1403 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gsto1O09131 240 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Sin3aQ60520 1274 aaKnown RBP5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cchcr1Q8K2I2 770 aa5.52□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms