RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Homer1Q9Z2Y3 366 aa10.97□□□□□ -0.65
Ncbp3-201ENSMUST00000021135 Gigyf2Q6Y7W8 1291 aaKnown RBP10.97□□□□□ -0.65
Ncbp3-201ENSMUST00000021135 Slc13a4Q8BZ82 625 aa10.97□□□□□ -0.65
Ncbp3-201ENSMUST00000021135 Slc4a10Q5DTL9 1118 aa10.97□□□□□ -0.65
Ncbp3-201ENSMUST00000021135 Ddx23D3Z0M9 819 aaKnown RBP10.96□□□□□ -0.65
Ncbp3-201ENSMUST00000021135 Eif3aP23116 1344 aaKnown RBP10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Spag9Q58A65 1321 aaKnown RBP10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Bbof1Q3V079 533 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Trim25Q61510 634 aaKnown RBP10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Pak3Q61036 559 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Sept11Q8C1B7 431 aaKnown RBP10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Vps41Q5KU39 853 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Gse1Q3U3C9 1213 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Rundc1Q0VDN7 615 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Fam107bQ3TGF2 131 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Vps37cQ8R105 352 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Lamb3Q61087 1168 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Stk24Q99KH8 431 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Ercc3P49135 783 aa10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Luc7lQ9CYI4 371 aaKnown RBP10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Ddx46Q569Z5 1032 aaKnown RBP10.95□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Syap1Q9D5V6 365 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Jakmip2D3YXK0 820 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 ZfxP17012 799 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Ccdc183A2AJB1 534 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 StambpQ9CQ26 424 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Plekhd1B2RPU2 505 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Ddx11Q6AXC6 880 aa10.94□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 SarnpQ9D1J3 210 aaKnown RBP10.93□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Eif3j1Q3UGC7 261 aaKnown RBP10.93□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Eif3j2Q66JS6 263 aa10.93□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Abcc9P70170 1546 aa10.93□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 KarsQ99MN1 595 aaKnown RBP10.93□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Armc9Q9D2I5 817 aa10.93□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Cers3Q1A3B0 383 aa10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Themis2Q91YX0 663 aa10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Tnpo1Q8BFY9 898 aaKnown RBP10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Uri1Q3TLD5 531 aa10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Sin3aQ60520 1274 aaKnown RBP10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Gbp2Q9Z0E6 589 aa10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Jakmip3Q5DTN8 844 aa10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Tspyl3Q3UYP3 334 aa10.92□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Abcd1P48410 736 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 TxlnaQ6PAM1 554 aaKnown RBP10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Erlin1Q91X78 346 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Ccdc96Q9CR92 584 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 TnmdQ9EP64 317 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Paxbp1P58501 919 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Tex35Q14BK3 207 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 RalylQ8BTF8 293 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Naa25Q8BWZ3 972 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Tceal9Q9DD24 104 aa10.91□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Maats1Q8BRC6 783 aa10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Synpo2Q91YE8 1087 aaKnown RBP10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Akap8Q9DBR0 687 aaKnown RBP10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Cchcr1Q8K2I2 770 aa10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Cfap99A0A140LIX9 648 aa10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Shtn1Q8K2Q9 631 aa10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 Dnaaf4Q8R368 420 aa10.9□□□□□ -0.66
Ncbp3-201ENSMUST00000021135 LarsQ8BMJ2 1178 aa10.9□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Cep89Q9CZX2 791 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Zeb2Q9R0G7 1215 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Hmgb1P63158 215 aaKnown RBP10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Mipol1Q9D9F8 279 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Sass6Q80UK7 654 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 CenpqQ9CPQ5 267 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Smc1aQ9CU62 1233 aaKnown RBP10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Larp1Q6ZQ58 1072 aaKnown RBP10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Pibf1E9Q6K3 756 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Gtf2f1Q3THK3 508 aaKnown RBP10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Rassf4Q8CB96 322 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Ccdc186Q8C9S4 917 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Pdcl2Q78Y63 240 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Trim29Q8R2Q0 587 aa10.89□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Gtpbp4Q99ME9 634 aaKnown RBP10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Slu7Q8BHJ9 585 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Q8C5K5 320 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Gnl2Q99LH1 728 aaKnown RBP10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Cdr1E9Q0B4 517 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Babam1Q3UI43 333 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Dcaf11Q91VU6 549 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Ssh1Q76I79 1042 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Smg6P61406 1418 aaKnown RBP10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Zkscan1Q8BGS3 561 aaKnown RBP10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Fam114a1Q9D281 569 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Mtus2Q3UHD3 1353 aa10.88□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Rsrc1Q9DBU6 334 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Wdr63B2RY71 923 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Ttll13A4Q9F6 804 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Rrp7aQ9D1C9 280 aaKnown RBP10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Apol7cQ8C6E1 369 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Ccdc73Q8CDM4 1066 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Pafah1b1P63005 410 aaKnown RBP10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Tspyl2Q7TQI8 677 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Ccp110Q7TSH4 1004 aa10.87□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Serpinb6bO08804 377 aa10.86□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Pip4k2aO70172 405 aa10.86□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Birc3O08863 600 aa10.86□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Fam184aE9PW83 1143 aa10.86□□□□□ -0.67
Ncbp3-201ENSMUST00000021135 Smarcc1P97496 1104 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms