RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YBR144CP34215 104 aa4.25□□□□□ -1.73
VPS4YPR173C YRA2P36036 203 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
VPS4YPR173C RSM18P40033 138 aa4.25□□□□□ -1.73
VPS4YPR173C YFL019CP43576 117 aa4.25□□□□□ -1.73
VPS4YPR173C KTI11Q3E840 82 aa4.25□□□□□ -1.73
VPS4YPR173C YBL039W-BP0C268 59 aa4.24□□□□□ -1.73
VPS4YPR173C AQY2P0CD90 149 aa4.24□□□□□ -1.73
VPS4YPR173C UBC4P15731 148 aa4.24□□□□□ -1.73
VPS4YPR173C SFT1P43682 97 aa4.24□□□□□ -1.73
VPS4YPR173C YMR320WQ04897 101 aa4.24□□□□□ -1.73
VPS4YPR173C BET1P22804 142 aa4.23□□□□□ -1.73
VPS4YPR173C FYV5P25585 152 aa4.23□□□□□ -1.73
VPS4YPR173C YOR314WQ12506 109 aa4.23□□□□□ -1.73
VPS4YPR173C RPS28BP0C0X0 67 aaKnown RBP4.22□□□□□ -1.73
VPS4YPR173C YBR121C-AP0C5L4 52 aa4.22□□□□□ -1.73
VPS4YPR173C RPS28AQ3E7X9 67 aaPredicted RBP4.22□□□□□ -1.73
VPS4YPR173C CUP1-1P0CX80 61 aa4.21□□□□□ -1.73
VPS4YPR173C CUP1-2P0CX81 61 aa4.21□□□□□ -1.73
VPS4YPR173C ICS3P47034 131 aa4.21□□□□□ -1.73
VPS4YPR173C YDR182W-AQ3E796 67 aa4.21□□□□□ -1.73
VPS4YPR173C NOP10Q6Q547 58 aaPredicted RBP4.21□□□□□ -1.73
VPS4YPR173C RPL33AP05744 107 aaKnown RBP4.21□□□□□ -1.74
VPS4YPR173C YAL064WP39711 94 aa4.21□□□□□ -1.74
VPS4YPR173C RPL33BP41056 107 aaKnown RBP4.21□□□□□ -1.74
VPS4YPR173C YBR230W-AQ3E762 66 aa4.21□□□□□ -1.74
VPS4YPR173C YBL081WP38180 368 aaKnown RBP4.2□□□□□ -1.74
VPS4YPR173C COX23P38824 151 aa4.2□□□□□ -1.74
VPS4YPR173C SGF11Q03067 99 aa4.2□□□□□ -1.74
VPS4YPR173C YJL127C-BQ3E828 52 aa4.2□□□□□ -1.74
VPS4YPR173C EDC2P40023 145 aaPredicted RBP4.19□□□□□ -1.74
VPS4YPR173C YGR164WP53291 111 aa4.19□□□□□ -1.74
VPS4YPR173C RPL36BO14455 100 aaKnown RBP4.18□□□□□ -1.74
VPS4YPR173C RPL36AP05745 100 aaPredicted RBP4.18□□□□□ -1.74
VPS4YPR173C SPC1P46965 94 aa4.18□□□□□ -1.74
VPS4YPR173C YLR412C-AQ3E742 68 aa4.18□□□□□ -1.74
VPS4YPR173C KSH1Q8TGJ3 72 aa4.18□□□□□ -1.74
VPS4YPR173C IGD1P43598 195 aa4.17□□□□□ -1.74
VPS4YPR173C YOL014WQ08110 124 aa4.17□□□□□ -1.74
VPS4YPR173C YLR307C-AQ3E825 87 aa4.17□□□□□ -1.74
VPS4YPR173C YHR213W-BQ8TGK1 99 aa4.17□□□□□ -1.74
VPS4YPR173C PRP8P33334 2413 aaKnown RBP4.16□□□□□ -1.74
VPS4YPR173C YDR115WQ04598 105 aa4.16□□□□□ -1.74
VPS4YPR173C YNL042W-BQ3E7Z2 85 aa4.16□□□□□ -1.74
VPS4YPR173C YOL166W-AQ8TGJ1 51 aa4.16□□□□□ -1.74
VPS4YPR173C YGR035W-AQ45U48 73 aa4.15□□□□□ -1.75
VPS4YPR173C TDA8Q6B2U8 126 aa4.15□□□□□ -1.75
VPS4YPR173C YHL005CP38752 130 aa4.13□□□□□ -1.75
VPS4YPR173C YJL133C-AQ3E7A3 74 aa4.13□□□□□ -1.75
VPS4YPR173C TEL1P38110 2787 aa4.12□□□□□ -1.75
VPS4YPR173C RTC6O14464 93 aa4.12□□□□□ -1.75
VPS4YPR173C RPL43AP0CX25 92 aaKnown RBP4.12□□□□□ -1.75
VPS4YPR173C RPL43BP0CX26 92 aa4.12□□□□□ -1.75
VPS4YPR173C SPT4P32914 102 aaPredicted RBP4.12□□□□□ -1.75
VPS4YPR173C YLR162WQ06235 118 aa4.12□□□□□ -1.75
VPS4YPR173C YLL066W-BQ8TGJ7 56 aa4.12□□□□□ -1.75
VPS4YPR173C Q0032Q9ZZX7 96 aa4.12□□□□□ -1.75
VPS4YPR173C YAR023CD6VPM8 179 aa4.1□□□□□ -1.75
VPS4YPR173C LIP1Q03579 150 aa4.09□□□□□ -1.75
VPS4YPR173C ECM19Q06011 112 aa4.09□□□□□ -1.75
VPS4YPR173C YGL041C-BQ3E750 60 aa4.09□□□□□ -1.75
VPS4YPR173C MEC1P38111 2368 aa4.08□□□□□ -1.76
VPS4YPR173C YEL045CP32616 141 aa4.08□□□□□ -1.76
VPS4YPR173C RRT15Q3E811 62 aa4.08□□□□□ -1.76
VPS4YPR173C YOL013W-AP0C272 63 aaPredicted RBP4.07□□□□□ -1.76
VPS4YPR173C RPS30AP0CX33 63 aaKnown RBP4.07□□□□□ -1.76
VPS4YPR173C RPS30BP0CX34 63 aaKnown RBP4.07□□□□□ -1.76
VPS4YPR173C YIL102CP40488 101 aa4.07□□□□□ -1.76
VPS4YPR173C SNA2P56508 79 aa4.07□□□□□ -1.76
VPS4YPR173C YGR121W-AQ3E816 71 aa4.07□□□□□ -1.76
VPS4YPR173C DDR2P89113 61 aa4.06□□□□□ -1.76
VPS4YPR173C YHR007C-AQ07074 71 aa4.06□□□□□ -1.76
VPS4YPR173C YOR072WQ08486 104 aa4.06□□□□□ -1.76
VPS4YPR173C YKL065W-AQ2V2P2 73 aa4.06□□□□□ -1.76
VPS4YPR173C MIC10Q96VH5 97 aa4.06□□□□□ -1.76
VPS4YPR173C TRA1P38811 3744 aa4.06□□□□□ -1.76
VPS4YPR173C PEX22P39718 180 aa4.05□□□□□ -1.76
VPS4YPR173C BSC4P53841 131 aa4.05□□□□□ -1.76
VPS4YPR173C YOR381W-AQ3E804 55 aa4.05□□□□□ -1.76
VPS4YPR173C YGL193CP53097 103 aa4.04□□□□□ -1.76
VPS4YPR173C YOR268CQ08734 132 aa4.04□□□□□ -1.76
VPS4YPR173C GIS2P53849 153 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76 RIP-Chip
VPS4YPR173C YNL277W-AQ3E7Z0 62 aa4.03□□□□□ -1.76
VPS4YPR173C YMR122CQ03879 124 aa4.01□□□□□ -1.77
VPS4YPR173C HHF1P02309 103 aaKnown RBP3.99□□□□□ -1.77
VPS4YPR173C YAR064WP39563 99 aa3.99□□□□□ -1.77
VPS4YPR173C YCR043CP25361 127 aa3.98□□□□□ -1.77
VPS4YPR173C OST5Q92316 86 aa3.98□□□□□ -1.77
VPS4YPR173C YER188C-AP0C0V2 99 aa3.97□□□□□ -1.77
VPS4YPR173C YJL197C-AP0C5P0 93 aa3.97□□□□□ -1.77
VPS4YPR173C HUB1Q6Q546 73 aa3.97□□□□□ -1.77
VPS4YPR173C SDH6Q3E785 79 aa3.96□□□□□ -1.77
VPS4YPR173C UTP20P35194 2493 aaKnown RBP3.96□□□□□ -1.78
VPS4YPR173C YHR125WP38831 101 aa3.95□□□□□ -1.78
VPS4YPR173C YCL042WP25572 119 aa3.95□□□□□ -1.78
VPS4YPR173C YPR153WQ06537 140 aa3.94□□□□□ -1.78
VPS4YPR173C YLR157W-DP0CE99 70 aa3.93□□□□□ -1.78
VPS4YPR173C AUA1P32450 94 aa3.93□□□□□ -1.78
VPS4YPR173C YMR001C-AQ8TGS9 76 aa3.93□□□□□ -1.78
VPS4YPR173C YMR230W-AQ3E7B5 62 aa3.92□□□□□ -1.78
VPS4YPR173C YOL097W-AQ3E7Y9 61 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 90.5 ms