RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W YBR056W-AI2HB52 66 aa0.44□□□□□ -2.34
MRPL40YPL173W ECM12O13529 151 aa0.44□□□□□ -2.34
MRPL40YPL173W YBR016WP38216 128 aa0.44□□□□□ -2.34
MRPL40YPL173W ESP1Q03018 1630 aa0.44□□□□□ -2.34
MRPL40YPL173W YHR214C-DP0CX93 97 aa0.43□□□□□ -2.34
MRPL40YPL173W YMR082CQ04276 118 aa0.43□□□□□ -2.34
MRPL40YPL173W YMR122W-AQ3E842 84 aa0.43□□□□□ -2.34
MRPL40YPL173W YIL134C-AQ45U18 67 aa0.43□□□□□ -2.34
MRPL40YPL173W FPR2P32472 135 aa0.42□□□□□ -2.34
MRPL40YPL173W PAU23Q07987 124 aa0.42□□□□□ -2.34
MRPL40YPL173W PAU17Q12370 124 aa0.42□□□□□ -2.34
MRPL40YPL173W YGL194C-AQ2V2P6 80 aa0.42□□□□□ -2.34
MRPL40YPL173W YAL065CO13511 128 aa0.41□□□□□ -2.34
MRPL40YPL173W PDX3P38075 228 aaKnown RBP0.41□□□□□ -2.34
MRPL40YPL173W NUP188P52593 1655 aaKnown RBP0.4□□□□□ -2.34
MRPL40YPL173W TOM6P33448 61 aa0.4□□□□□ -2.35
MRPL40YPL173W ATP18P81450 59 aa0.38□□□□□ -2.35
MRPL40YPL173W FIG2P25653 1609 aa0.38□□□□□ -2.35
MRPL40YPL173W ATX1P38636 73 aa0.37□□□□□ -2.35
MRPL40YPL173W YMR175W-AQ3E766 64 aa0.37□□□□□ -2.35
MRPL40YPL173W MLP2P40457 1679 aa0.37□□□□□ -2.35
MRPL40YPL173W SDH6Q3E785 79 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-DR5P0C2I2 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-DR6P0C2I3 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-LR2P0C2I5 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-LR3P0C2I6 1755 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY1B-PR1P0C2I9 1755 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY1B-PR2P0C2J0 1756 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-PR3P0C2J1 1755 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY2B-LR1P0C2J3 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY2B-FP0CX63 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY2B-GR2P0CX64 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY2B-CP25384 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-JR1P47098 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-ML2Q03434 1755 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY2B-DR2Q03494 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-ER1Q03612 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-DR1Q03855 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-ML1Q04711 1755 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY2B-DR3Q07791 1770 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY2B-OR1Q12113 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-GR2Q12269 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-OLQ12273 1755 aa0.36□□□□□ -2.35
MRPL40YPL173W TY1B-PLQ12414 1755 aaKnown RBP0.36□□□□□ -2.35
MRPL40YPL173W TY2B-DR1Q12472 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W TY2B-OR2Q12501 1770 aa0.36□□□□□ -2.35
MRPL40YPL173W SGF11Q03067 99 aa0.35□□□□□ -2.35
MRPL40YPL173W FLO1P32768 1537 aa0.34□□□□□ -2.35
MRPL40YPL173W RRP5Q05022 1729 aaKnown RBP0.34□□□□□ -2.36
MRPL40YPL173W NOP10Q6Q547 58 aaPredicted RBP0.34□□□□□ -2.36
MRPL40YPL173W APC1P53886 1748 aa0.33□□□□□ -2.36
MRPL40YPL173W TY1B-JR2P47100 1755 aaKnown RBP0.32□□□□□ -2.36
MRPL40YPL173W TY1B-ER2Q03619 1755 aa0.32□□□□□ -2.36
MRPL40YPL173W TY1B-MR1Q04214 1755 aa0.32□□□□□ -2.36
MRPL40YPL173W TY1B-MR2Q04670 1755 aaKnown RBP0.32□□□□□ -2.36
MRPL40YPL173W TY1B-LR1Q12088 1755 aaKnown RBP0.32□□□□□ -2.36
MRPL40YPL173W TY1B-NL1Q12112 1755 aa0.32□□□□□ -2.36
MRPL40YPL173W TY1B-GR1Q12141 1755 aa0.32□□□□□ -2.36
MRPL40YPL173W CWP2P43497 92 aa0.32□□□□□ -2.36
MRPL40YPL173W YOR343CQ12484 108 aa0.32□□□□□ -2.36
MRPL40YPL173W YIL156W-BQ2V2P4 73 aa0.32□□□□□ -2.36
MRPL40YPL173W PDR12Q02785 1511 aa0.32□□□□□ -2.36
MRPL40YPL173W TY2B-BQ12491 1770 aa0.32□□□□□ -2.36
MRPL40YPL173W FKS3Q04952 1785 aa0.29□□□□□ -2.36
MRPL40YPL173W YPR108W-AQ3E7B3 70 aa0.29□□□□□ -2.36
MRPL40YPL173W YCR085WP25650 117 aa0.28□□□□□ -2.36
MRPL40YPL173W YOR105WQ08504 108 aa0.28□□□□□ -2.36
MRPL40YPL173W YPR145C-AQ2V2P0 78 aa0.28□□□□□ -2.36
MRPL40YPL173W ECM29P38737 1868 aa0.28□□□□□ -2.36
MRPL40YPL173W HKR1P41809 1802 aa0.27□□□□□ -2.37
MRPL40YPL173W POC4Q12245 148 aaPredicted RBP0.27□□□□□ -2.37
MRPL40YPL173W TY1B-DR3Q99231 1755 aa0.27□□□□□ -2.37
MRPL40YPL173W YDR381C-AQ3E6R5 114 aa0.26□□□□□ -2.37
MRPL40YPL173W YDR524C-BQ3E6R4 66 aa0.25□□□□□ -2.37
MRPL40YPL173W YKL068W-AQ3E826 78 aa0.24□□□□□ -2.37
MRPL40YPL173W YIL046W-AQ3E7Z4 54 aa0.23□□□□□ -2.37
MRPL40YPL173W YCR108CQ3E819 63 aa0.23□□□□□ -2.37
MRPL40YPL173W YBR032WP38223 100 aa0.22□□□□□ -2.37
MRPL40YPL173W YOL097W-AQ3E7Y9 61 aa0.22□□□□□ -2.37
MRPL40YPL173W STT4P37297 1900 aa0.22□□□□□ -2.37
MRPL40YPL173W EDC1P53080 175 aaPredicted RBP0.21□□□□□ -2.38
MRPL40YPL173W PMD1P32634 1753 aa0.21□□□□□ -2.38
MRPL40YPL173W UTP10P42945 1769 aaKnown RBP0.21□□□□□ -2.38
MRPL40YPL173W YDL022C-AP0C5L6 82 aa0.2□□□□□ -2.38
MRPL40YPL173W YOR314WQ12506 109 aa0.19□□□□□ -2.38
MRPL40YPL173W MOT1P32333 1867 aa0.18□□□□□ -2.38
MRPL40YPL173W YKL065W-AQ2V2P2 73 aa0.18□□□□□ -2.38
MRPL40YPL173W BPH1P25356 2167 aa0.16□□□□□ -2.38
MRPL40YPL173W YBL044WP38194 122 aa0.16□□□□□ -2.38
MRPL40YPL173W YGR025WP53216 100 aa0.16□□□□□ -2.38
MRPL40YPL173W YGR121W-AQ3E816 71 aa0.13□□□□□ -2.39
MRPL40YPL173W QCR9P22289 66 aa0.11□□□□□ -2.39
MRPL40YPL173W SWM2P40342 146 aa0.11□□□□□ -2.39
MRPL40YPL173W YDR246W-AQ3E763 66 aa0.11□□□□□ -2.39
MRPL40YPL173W RPS29AP41057 56 aaKnown RBP0.1□□□□□ -2.39
MRPL40YPL173W YKL018C-AQ3E7A7 99 aa0.08□□□□□ -2.4
MRPL40YPL173W TIM12P32830 109 aa0.07□□□□□ -2.4
MRPL40YPL173W ATP17Q06405 101 aa0.07□□□□□ -2.4
MRPL40YPL173W YGR035W-AQ45U48 73 aa0.07□□□□□ -2.4
MRPL40YPL173W YOR032W-AQ8TGS1 66 aa0.07□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms