RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	PAU10	Q03050	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	PAU9	Q3E770	120 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	RPS29B	P41058	56 aa	Known RBP	0.42	□□□□□ -2.34
RLM1	YPL089C	NUM1	Q00402	2748 aa		0.42	□□□□□ -2.34
RLM1	YPL089C	MOT1	P32333	1867 aa		0.41	□□□□□ -2.34
RLM1	YPL089C	CUP1-1	P0CX80	61 aa		0.41	□□□□□ -2.34
RLM1	YPL089C	CUP1-2	P0CX81	61 aa		0.41	□□□□□ -2.34
RLM1	YPL089C	PAU4	P53427	120 aa		0.41	□□□□□ -2.34
RLM1	YPL089C	YDR034W-B	Q6Q5X2	51 aa		0.41	□□□□□ -2.34
RLM1	YPL089C	MYO1	P08964	1928 aa		0.4	□□□□□ -2.34
RLM1	YPL089C	RPA12	P32529	125 aa	Known RBP	0.4	□□□□□ -2.34
RLM1	YPL089C	YDR042C	Q03205	200 aa		0.4	□□□□□ -2.34
RLM1	YPL089C	YDR029W	Q12111	104 aa		0.4	□□□□□ -2.34
RLM1	YPL089C	SUS1	Q6WNK7	96 aa		0.4	□□□□□ -2.34
RLM1	YPL089C	ECM29	P38737	1868 aa		0.4	□□□□□ -2.35
RLM1	YPL089C	SEN1	Q00416	2231 aa	Known RBP	0.4	□□□□□ -2.35
RLM1	YPL089C	SNU13	P39990	126 aa	Known RBP	0.4	□□□□□ -2.35
RLM1	YPL089C	YNL190W	P53872	204 aa		0.4	□□□□□ -2.35
RLM1	YPL089C	YCR075W-A	Q3E830	75 aa		0.4	□□□□□ -2.35
RLM1	YPL089C	MLP1	Q02455	1875 aa	Known RBP	0.39	□□□□□ -2.35
RLM1	YPL089C	RPC10	P40422	70 aa		0.39	□□□□□ -2.35
RLM1	YPL089C	TOR2	P32600	2474 aa	Known RBP	0.39	□□□□□ -2.35
RLM1	YPL089C	FLO1	P32768	1537 aa		0.38	□□□□□ -2.35
RLM1	YPL089C	TEL1	P38110	2787 aa		0.38	□□□□□ -2.35
RLM1	YPL089C	YCL001W-B	Q96VH2	84 aa		0.38	□□□□□ -2.35
RLM1	YPL089C	TOM1	Q03280	3268 aa		0.37	□□□□□ -2.35
RLM1	YPL089C	NHP2	P32495	156 aa	Predicted RBP	0.37	□□□□□ -2.35
RLM1	YPL089C	YNL042W-B	Q3E7Z2	85 aa		0.37	□□□□□ -2.35
RLM1	YPL089C	GCN1	P33892	2672 aa	Known RBP	0.36	□□□□□ -2.35
RLM1	YPL089C	VPS13	Q07878	3144 aa		0.36	□□□□□ -2.35
RLM1	YPL089C	YNL198C	P40166	100 aa		0.36	□□□□□ -2.35
RLM1	YPL089C	BSC4	P53841	131 aa		0.36	□□□□□ -2.35
RLM1	YPL089C	YMR082C	Q04276	118 aa		0.36	□□□□□ -2.35
RLM1	YPL089C	SCP1	Q08873	200 aa		0.36	□□□□□ -2.35
RLM1	YPL089C	MHF2	Q3E829	80 aa		0.36	□□□□□ -2.35
RLM1	YPL089C	ECM12	O13529	151 aa		0.35	□□□□□ -2.35
RLM1	YPL089C	FMP27	Q06179	2628 aa		0.35	□□□□□ -2.35
RLM1	YPL089C	UTP20	P35194	2493 aa	Known RBP	0.35	□□□□□ -2.35
RLM1	YPL089C	YJR107C-A	P0CT86	78 aa		0.35	□□□□□ -2.35
RLM1	YPL089C	YBR201C-A	Q2V2Q3	67 aa		0.35	□□□□□ -2.35
RLM1	YPL089C	Q0032	Q9ZZX7	96 aa		0.35	□□□□□ -2.35
RLM1	YPL089C	RPL38	P49167	78 aa	Known RBP	0.34	□□□□□ -2.36
RLM1	YPL089C	IRA1	P18963	3092 aa		0.34	□□□□□ -2.36
RLM1	YPL089C	COX7	P10174	60 aa		0.33	□□□□□ -2.36
RLM1	YPL089C	YGL194C-A	Q2V2P6	80 aa		0.33	□□□□□ -2.36
RLM1	YPL089C	DYN1	P36022	4092 aa		0.33	□□□□□ -2.36
RLM1	YPL089C	MEC1	P38111	2368 aa		0.33	□□□□□ -2.36
RLM1	YPL089C	IRA2	P19158	3079 aa		0.32	□□□□□ -2.36
RLM1	YPL089C	YAL065C	O13511	128 aa		0.32	□□□□□ -2.36
RLM1	YPL089C	PDX3	P38075	228 aa	Known RBP	0.32	□□□□□ -2.36
RLM1	YPL089C	YBR016W	P38216	128 aa		0.32	□□□□□ -2.36
RLM1	YPL089C	YMR175W-A	Q3E766	64 aa		0.32	□□□□□ -2.36
RLM1	YPL089C	YMR122W-A	Q3E842	84 aa		0.32	□□□□□ -2.36
RLM1	YPL089C	YDR524C-B	Q3E6R4	66 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	CSF1	Q12150	2958 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	YFR009W-A	P0C5M9	85 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	YHR214C-D	P0CX93	97 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	FPR2	P32472	135 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	TOM6	P33448	61 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	PAU23	Q07987	124 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	PAU17	Q12370	124 aa		0.31	□□□□□ -2.36
RLM1	YPL089C	STT4	P37297	1900 aa		0.3	□□□□□ -2.36
RLM1	YPL089C	MDN1	Q12019	4910 aa	Known RBP	0.29	□□□□□ -2.36
RLM1	YPL089C	ATP18	P81450	59 aa		0.29	□□□□□ -2.36
RLM1	YPL089C	YOR343C	Q12484	108 aa		0.28	□□□□□ -2.36
RLM1	YPL089C	YIL134C-A	Q45U18	67 aa		0.28	□□□□□ -2.36
RLM1	YPL089C	ATX1	P38636	73 aa		0.28	□□□□□ -2.37
RLM1	YPL089C	SDH6	Q3E785	79 aa		0.28	□□□□□ -2.37
RLM1	YPL089C	YIL046W-A	Q3E7Z4	54 aa		0.28	□□□□□ -2.37
RLM1	YPL089C	NOP10	Q6Q547	58 aa	Predicted RBP	0.28	□□□□□ -2.37
RLM1	YPL089C	YKL068W-A	Q3E826	78 aa		0.27	□□□□□ -2.37
RLM1	YPL089C	CWP2	P43497	92 aa		0.26	□□□□□ -2.37
RLM1	YPL089C	BPH1	P25356	2167 aa		0.26	□□□□□ -2.37
RLM1	YPL089C	TRA1	P38811	3744 aa		0.26	□□□□□ -2.37
RLM1	YPL089C	YIL156W-B	Q2V2P4	73 aa		0.26	□□□□□ -2.37
RLM1	YPL089C	YCR085W	P25650	117 aa		0.25	□□□□□ -2.37
RLM1	YPL089C	YOR105W	Q08504	108 aa		0.25	□□□□□ -2.37
RLM1	YPL089C	SGF11	Q03067	99 aa		0.25	□□□□□ -2.37
RLM1	YPL089C	POC4	Q12245	148 aa	Predicted RBP	0.25	□□□□□ -2.37
RLM1	YPL089C	YPR145C-A	Q2V2P0	78 aa		0.24	□□□□□ -2.37
RLM1	YPL089C	YPR108W-A	Q3E7B3	70 aa		0.24	□□□□□ -2.37
RLM1	YPL089C	YOL097W-A	Q3E7Y9	61 aa		0.23	□□□□□ -2.37
RLM1	YPL089C	YKL065W-A	Q2V2P2	73 aa		0.23	□□□□□ -2.37
RLM1	YPL089C	YBR032W	P38223	100 aa		0.22	□□□□□ -2.37
RLM1	YPL089C	EDC1	P53080	175 aa	Predicted RBP	0.21	□□□□□ -2.38
RLM1	YPL089C	YOR314W	Q12506	109 aa		0.21	□□□□□ -2.38
RLM1	YPL089C	YDR381C-A	Q3E6R5	114 aa		0.21	□□□□□ -2.38
RLM1	YPL089C	Q0297	Q9ZZV8	51 aa		0.21	□□□□□ -2.38
RLM1	YPL089C	YGR025W	P53216	100 aa		0.2	□□□□□ -2.38
RLM1	YPL089C	YDL022C-A	P0C5L6	82 aa		0.2	□□□□□ -2.38
RLM1	YPL089C	RPS27A	P35997	82 aa	Known RBP	0.18	□□□□□ -2.38
RLM1	YPL089C	RPS27B	P38711	82 aa		0.18	□□□□□ -2.38
RLM1	YPL089C	SWM2	P40342	146 aa		0.18	□□□□□ -2.38
RLM1	YPL089C	YCR108C	Q3E819	63 aa		0.17	□□□□□ -2.38
RLM1	YPL089C	YGR121W-A	Q3E816	71 aa		0.16	□□□□□ -2.38
RLM1	YPL089C	QCR9	P22289	66 aa		0.16	□□□□□ -2.38
RLM1	YPL089C	YBL044W	P38194	122 aa		0.16	□□□□□ -2.38
RLM1	YPL089C	YOR032W-A	Q8TGS1	66 aa		0.16	□□□□□ -2.38
RLM1	YPL089C	YGR035W-A	Q45U48	73 aa		0.15	□□□□□ -2.39
RLM1	YPL089C	YFR010W-A	P0C5N0	62 aa		0.14	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms