RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C YEL045CP32616 141 aa3.03□□□□□ -1.92
VHS3YOR054C MRPL38P35996 138 aaPredicted RBP3.03□□□□□ -1.92
VHS3YOR054C TDA2P40045 126 aa3.03□□□□□ -1.92
VHS3YOR054C SIP18P50263 79 aa3.03□□□□□ -1.92
VHS3YOR054C SED1Q01589 338 aa3.03□□□□□ -1.92
VHS3YOR054C YER188C-AP0C0V2 99 aa3.03□□□□□ -1.92
VHS3YOR054C RPS30AP0CX33 63 aaKnown RBP3.03□□□□□ -1.92
VHS3YOR054C RPS30BP0CX34 63 aaKnown RBP3.03□□□□□ -1.92
VHS3YOR054C YKL065W-AQ2V2P2 73 aa3.03□□□□□ -1.92
VHS3YOR054C SPO24Q3E752 67 aa3.03□□□□□ -1.92
VHS3YOR054C YML100W-AQ8TGT0 57 aa3.03□□□□□ -1.92
VHS3YOR054C OST5Q92316 86 aa3.03□□□□□ -1.92
VHS3YOR054C RPS23AP0CX29 145 aaKnown RBP3.02□□□□□ -1.93
VHS3YOR054C RPS23BP0CX30 145 aa3.02□□□□□ -1.93
VHS3YOR054C TOS8P53147 276 aa3.02□□□□□ -1.93
VHS3YOR054C YFR009W-AP0C5M9 85 aa3.02□□□□□ -1.93
VHS3YOR054C YHL037CP38733 133 aa3.02□□□□□ -1.93
VHS3YOR054C POR2P40478 281 aa3.02□□□□□ -1.93
VHS3YOR054C RPR2P40571 144 aa3.02□□□□□ -1.93
VHS3YOR054C YPR153WQ06537 140 aa3.01□□□□□ -1.93
VHS3YOR054C YLL006W-AQ3E814 58 aa3.01□□□□□ -1.93
VHS3YOR054C COX14P39103 70 aa3□□□□□ -1.93
VHS3YOR054C WWM1P43582 211 aaKnown RBP2.99□□□□□ -1.93
VHS3YOR054C CCW12Q12127 133 aa2.99□□□□□ -1.93
VHS3YOR054C TSC3Q3E790 80 aa2.99□□□□□ -1.93
VHS3YOR054C HOT13P36078 116 aa2.98□□□□□ -1.93
VHS3YOR054C YAL064WP39711 94 aa2.98□□□□□ -1.93
VHS3YOR054C YPS5P53057 165 aa2.98□□□□□ -1.93
VHS3YOR054C TRA1P38811 3744 aa2.98□□□□□ -1.93
VHS3YOR054C YGL193CP53097 103 aa2.98□□□□□ -1.93
VHS3YOR054C YMR244WQ04018 355 aa2.98□□□□□ -1.93
VHS3YOR054C YBR219CP38317 127 aa2.97□□□□□ -1.93
VHS3YOR054C YER135CP40082 130 aa2.97□□□□□ -1.93
VHS3YOR054C YIL102CP40488 101 aa2.97□□□□□ -1.93
VHS3YOR054C YOL014WQ08110 124 aa2.97□□□□□ -1.93
VHS3YOR054C VAM10Q08474 114 aa2.97□□□□□ -1.93
VHS3YOR054C YOR011W-AQ3E807 68 aa2.96□□□□□ -1.94
VHS3YOR054C YMR122W-AQ3E842 84 aa2.96□□□□□ -1.94
VHS3YOR054C LIP1Q03579 150 aa2.95□□□□□ -1.94
VHS3YOR054C YPR013CQ12145 317 aa2.95□□□□□ -1.94
VHS3YOR054C SPG1P50088 95 aa2.95□□□□□ -1.94
VHS3YOR054C YPR010C-AA5Z2X5 72 aa2.94□□□□□ -1.94
VHS3YOR054C DDR48P18899 430 aaKnown RBP2.94□□□□□ -1.94
VHS3YOR054C FYV5P25585 152 aa2.94□□□□□ -1.94
VHS3YOR054C PMP3P87284 55 aa2.93□□□□□ -1.94
VHS3YOR054C YNL146C-AQ3E7Z1 64 aa2.93□□□□□ -1.94
VHS3YOR054C YER145C-AA0A023PYF4 145 aa2.93□□□□□ -1.94
VHS3YOR054C COX23P38824 151 aa2.93□□□□□ -1.94
VHS3YOR054C YDR010CQ12426 110 aa2.93□□□□□ -1.94
VHS3YOR054C YIL156W-BQ2V2P4 73 aa2.92□□□□□ -1.94
VHS3YOR054C YCR095W-AQ3E787 52 aa2.92□□□□□ -1.94
VHS3YOR054C RPS11AP0CX47 156 aaKnown RBP2.91□□□□□ -1.94
VHS3YOR054C RPS11BP0CX48 156 aaKnown RBP2.91□□□□□ -1.94
VHS3YOR054C EDC2P40023 145 aaPredicted RBP2.91□□□□□ -1.94
VHS3YOR054C SPC1P46965 94 aa2.91□□□□□ -1.94
VHS3YOR054C MRPS8Q03799 155 aa2.91□□□□□ -1.94
VHS3YOR054C YCL048W-AQ2V2Q2 79 aa2.91□□□□□ -1.94
VHS3YOR054C RPL29P05747 59 aaPredicted RBP2.9□□□□□ -1.94
VHS3YOR054C HUB1Q6Q546 73 aa2.9□□□□□ -1.94
VHS3YOR054C YHR213W-BQ8TGK1 99 aa2.9□□□□□ -1.94
VHS3YOR054C YOL013W-AP0C272 63 aaPredicted RBP2.89□□□□□ -1.95
VHS3YOR054C YLR157W-DP0CE99 70 aa2.88□□□□□ -1.95
VHS3YOR054C YJL133C-AQ3E7A3 74 aa2.88□□□□□ -1.95
VHS3YOR054C YNL042W-BQ3E7Z2 85 aa2.88□□□□□ -1.95
VHS3YOR054C YAR023CD6VPM8 179 aa2.88□□□□□ -1.95
VHS3YOR054C MVB12P42939 101 aa2.88□□□□□ -1.95
VHS3YOR054C SDH6Q3E785 79 aa2.88□□□□□ -1.95
VHS3YOR054C YNL162W-AQ3E7A8 72 aa2.87□□□□□ -1.95
VHS3YOR054C YMR001C-AQ8TGS9 76 aa2.87□□□□□ -1.95
VHS3YOR054C AQY2P0CD90 149 aa2.86□□□□□ -1.95
VHS3YOR054C QCR10P37299 77 aa2.86□□□□□ -1.95
VHS3YOR054C YCR043CP25361 127 aa2.85□□□□□ -1.95
VHS3YOR054C YBR230W-AQ3E762 66 aa2.85□□□□□ -1.95
VHS3YOR054C YJL127C-BQ3E828 52 aa2.85□□□□□ -1.95
VHS3YOR054C YGL149WP53116 101 aa2.85□□□□□ -1.95
VHS3YOR054C YCR001WP25347 104 aa2.84□□□□□ -1.95
VHS3YOR054C YHR125WP38831 101 aa2.84□□□□□ -1.95
VHS3YOR054C ECM19Q06011 112 aa2.84□□□□□ -1.95
VHS3YOR054C MRX7P53869 86 aa2.83□□□□□ -1.96
VHS3YOR054C YDL241WQ07738 123 aa2.83□□□□□ -1.96
VHS3YOR054C Q0297Q9ZZV8 51 aa2.83□□□□□ -1.96
VHS3YOR054C ATP17Q06405 101 aa2.83□□□□□ -1.96
VHS3YOR054C YBL039W-BP0C268 59 aa2.82□□□□□ -1.96
VHS3YOR054C YBR027CP38220 110 aa2.82□□□□□ -1.96
VHS3YOR054C BSC4P53841 131 aa2.81□□□□□ -1.96
VHS3YOR054C TAR1Q8TGM6 124 aa2.81□□□□□ -1.96
VHS3YOR054C URA2P07259 2214 aaKnown RBP2.81□□□□□ -1.96
VHS3YOR054C AUA1P32450 94 aa2.81□□□□□ -1.96
VHS3YOR054C IGD1P43598 195 aa2.81□□□□□ -1.96
VHS3YOR054C SOM1Q05676 74 aa2.81□□□□□ -1.96
VHS3YOR054C LCL2Q08045 131 aa2.81□□□□□ -1.96
VHS3YOR054C SNA2P56508 79 aa2.8□□□□□ -1.96
VHS3YOR054C YFR032C-BQ8TGU2 87 aa2.8□□□□□ -1.96
VHS3YOR054C YAR064WP39563 99 aa2.8□□□□□ -1.96
VHS3YOR054C HOR7Q05827 59 aa2.8□□□□□ -1.96
VHS3YOR054C RPC10P40422 70 aa2.79□□□□□ -1.96
VHS3YOR054C YLR307C-AQ3E825 87 aa2.79□□□□□ -1.96
VHS3YOR054C YNL122CP53921 115 aaPredicted RBP2.78□□□□□ -1.96
VHS3YOR054C FYV12Q08559 129 aa2.78□□□□□ -1.96
VHS3YOR054C DYN1P36022 4092 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms