RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YGL149W	P53116	101 aa		5.15	□□□□□ -1.58
MSB3	YNL293W	YPR010C-A	A5Z2X5	72 aa		5.15	□□□□□ -1.59
MSB3	YNL293W	RPS27A	P35997	82 aa	Known RBP	5.15	□□□□□ -1.59
MSB3	YNL293W	RPS27B	P38711	82 aa		5.15	□□□□□ -1.59
MSB3	YNL293W	POR2	P40478	281 aa		5.15	□□□□□ -1.59
MSB3	YNL293W	YBR200W-A	Q3E755	54 aa		5.15	□□□□□ -1.59
MSB3	YNL293W	YBL008W-A	Q3E821	79 aa		5.15	□□□□□ -1.59
MSB3	YNL293W	YKR073C	P36153	106 aa		5.14	□□□□□ -1.59
MSB3	YNL293W	COX23	P38824	151 aa		5.14	□□□□□ -1.59
MSB3	YNL293W	SNA2	P56508	79 aa		5.13	□□□□□ -1.59
MSB3	YNL293W	YLL006W-A	Q3E814	58 aa		5.13	□□□□□ -1.59
MSB3	YNL293W	YBR219C	P38317	127 aa		5.13	□□□□□ -1.59
MSB3	YNL293W	YPR013C	Q12145	317 aa		5.13	□□□□□ -1.59
MSB3	YNL293W	YJL197C-A	P0C5P0	93 aa		5.12	□□□□□ -1.59
MSB3	YNL293W	YCR001W	P25347	104 aa		5.12	□□□□□ -1.59
MSB3	YNL293W	COX14	P39103	70 aa		5.12	□□□□□ -1.59
MSB3	YNL293W	BSC4	P53841	131 aa		5.12	□□□□□ -1.59
MSB3	YNL293W	YOL085C	Q99345	113 aa		5.11	□□□□□ -1.59
MSB3	YNL293W	SIP18	P50263	79 aa		5.1	□□□□□ -1.59
MSB3	YNL293W	YLR157W-D	P0CE99	70 aa		5.09	□□□□□ -1.59
MSB3	YNL293W	CCW12	Q12127	133 aa		5.09	□□□□□ -1.59
MSB3	YNL293W	YMR122W-A	Q3E842	84 aa		5.09	□□□□□ -1.59
MSB3	YNL293W	YMR001C-A	Q8TGS9	76 aa		5.09	□□□□□ -1.59
MSB3	YNL293W	FAS1	P07149	2051 aa	Known RBP	5.09	□□□□□ -1.6
MSB3	YNL293W	ATP17	Q06405	101 aa		5.09	□□□□□ -1.6
MSB3	YNL293W	SDH6	Q3E785	79 aa		5.09	□□□□□ -1.6
MSB3	YNL293W	AQY2	P0CD90	149 aa		5.08	□□□□□ -1.6
MSB3	YNL293W	RTC6	O14464	93 aa		5.07	□□□□□ -1.6
MSB3	YNL293W	YOL013W-A	P0C272	63 aa	Predicted RBP	5.07	□□□□□ -1.6
MSB3	YNL293W	YGR025W	P53216	100 aa		5.07	□□□□□ -1.6
MSB3	YNL293W	YPL278C	Q08990	100 aa		5.06	□□□□□ -1.6
MSB3	YNL293W	YDL241W	Q07738	123 aa		5.04	□□□□□ -1.6
MSB3	YNL293W	BEM2	P39960	2167 aa	Known RBP	5.03	□□□□□ -1.6
MSB3	YNL293W	GLT1	Q12680	2145 aa	Known RBP	5.03	□□□□□ -1.6
MSB3	YNL293W	YER175W-A	Q8TGU4	54 aa		5.03	□□□□□ -1.6
MSB3	YNL293W	VAM10	Q08474	114 aa		5.02	□□□□□ -1.61
MSB3	YNL293W	SEN1	Q00416	2231 aa	Known RBP	5.02	□□□□□ -1.61
MSB3	YNL293W	YER084W	P40057	128 aa		5.01	□□□□□ -1.61
MSB3	YNL293W	YMR105W-A	Q8TGS8	64 aa		5.01	□□□□□ -1.61
MSB3	YNL293W	YBR027C	P38220	110 aa		5	□□□□□ -1.61
MSB3	YNL293W	YHR125W	P38831	101 aa		5	□□□□□ -1.61
MSB3	YNL293W	LCL2	Q08045	131 aa		5	□□□□□ -1.61
MSB3	YNL293W	YHR213W-B	Q8TGK1	99 aa		5	□□□□□ -1.61
MSB3	YNL293W	ACC1	Q00955	2233 aa	Known RBP	4.99	□□□□□ -1.61
MSB3	YNL293W	SEC16	P48415	2195 aa	Known RBP	4.99	□□□□□ -1.61
MSB3	YNL293W	YNL122C	P53921	115 aa	Predicted RBP	4.99	□□□□□ -1.61
MSB3	YNL293W	ECM19	Q06011	112 aa		4.99	□□□□□ -1.61
MSB3	YNL293W	MRP10	O75012	95 aa		4.97	□□□□□ -1.61
MSB3	YNL293W	IGD1	P43598	195 aa		4.97	□□□□□ -1.61
MSB3	YNL293W	BRR2	P32639	2163 aa	Known RBP	4.97	□□□□□ -1.61
MSB3	YNL293W	RPL29	P05747	59 aa	Predicted RBP	4.97	□□□□□ -1.61
MSB3	YNL293W	POL2	P21951	2222 aa	Known RBP	4.96	□□□□□ -1.62
MSB3	YNL293W	YJL133C-A	Q3E7A3	74 aa		4.95	□□□□□ -1.62
MSB3	YNL293W	YCL048W-A	Q2V2Q2	79 aa		4.95	□□□□□ -1.62
MSB3	YNL293W	YCR041W	P37265	110 aa		4.93	□□□□□ -1.62
MSB3	YNL293W	YGL014C-A	P0C5N1	53 aa		4.93	□□□□□ -1.62
MSB3	YNL293W	FPR1	P20081	114 aa	Known RBP	4.93	□□□□□ -1.62
MSB3	YNL293W	YIL086C	P40503	102 aa		4.93	□□□□□ -1.62
MSB3	YNL293W	PMP3	P87284	55 aa		4.93	□□□□□ -1.62
MSB3	YNL293W	RPL39	P04650	51 aa		4.92	□□□□□ -1.62
MSB3	YNL293W	AUA1	P32450	94 aa		4.91	□□□□□ -1.62
MSB3	YNL293W	SGF11	Q03067	99 aa		4.91	□□□□□ -1.62
MSB3	YNL293W	FAB1	P34756	2278 aa		4.91	□□□□□ -1.62
MSB3	YNL293W	YNL162W-A	Q3E7A8	72 aa		4.9	□□□□□ -1.62
MSB3	YNL293W	YIL046W-A	Q3E7Z4	54 aa		4.9	□□□□□ -1.62
MSB3	YNL293W	Q0032	Q9ZZX7	96 aa		4.89	□□□□□ -1.63
MSB3	YNL293W	YNL146C-A	Q3E7Z1	64 aa		4.88	□□□□□ -1.63
MSB3	YNL293W	MVB12	P42939	101 aa		4.87	□□□□□ -1.63
MSB3	YNL293W	YOR011W-A	Q3E807	68 aa		4.87	□□□□□ -1.63
MSB3	YNL293W	YBR230W-A	Q3E762	66 aa		4.85	□□□□□ -1.63
MSB3	YNL293W	YER078W-A	Q3E7A2	54 aa		4.85	□□□□□ -1.63
MSB3	YNL293W	YJL127C-B	Q3E828	52 aa		4.85	□□□□□ -1.63
MSB3	YNL293W	YDR524C-B	Q3E6R4	66 aa		4.85	□□□□□ -1.63
MSB3	YNL293W	YAR064W	P39563	99 aa		4.83	□□□□□ -1.64
MSB3	YNL293W	YLR307C-A	Q3E825	87 aa		4.83	□□□□□ -1.64
MSB3	YNL293W	YBL039W-B	P0C268	59 aa		4.82	□□□□□ -1.64
MSB3	YNL293W	YDR210W	Q03482	75 aa		4.81	□□□□□ -1.64
MSB3	YNL293W	YDL012C	Q12489	107 aa		4.8	□□□□□ -1.64
MSB3	YNL293W	CMC4	Q3E7A9	73 aa		4.78	□□□□□ -1.64
MSB3	YNL293W	DDR2	P89113	61 aa		4.77	□□□□□ -1.65
MSB3	YNL293W	YEL014C	P39999	101 aa		4.75	□□□□□ -1.65
MSB3	YNL293W	COX8	P04039	78 aa		4.74	□□□□□ -1.65
MSB3	YNL293W	YOL097W-A	Q3E7Y9	61 aa		4.74	□□□□□ -1.65
MSB3	YNL293W	HOR7	Q05827	59 aa		4.72	□□□□□ -1.65
MSB3	YNL293W	YBR201C-A	Q2V2Q3	67 aa		4.71	□□□□□ -1.66
MSB3	YNL293W	RPC10	P40422	70 aa		4.68	□□□□□ -1.66
MSB3	YNL293W	TOM1	Q03280	3268 aa		4.67	□□□□□ -1.66
MSB3	YNL293W	YCL042W	P25572	119 aa		4.66	□□□□□ -1.66
MSB3	YNL293W	YHR007C-A	Q07074	71 aa		4.66	□□□□□ -1.66
MSB3	YNL293W	YDR115W	Q04598	105 aa		4.66	□□□□□ -1.66
MSB3	YNL293W	YOR072W	Q08486	104 aa		4.64	□□□□□ -1.67
MSB3	YNL293W	YPR195C	Q06594	109 aa		4.62	□□□□□ -1.67
MSB3	YNL293W	YLR122C	Q12312	125 aa		4.62	□□□□□ -1.67
MSB3	YNL293W	YGL041C-B	Q3E750	60 aa		4.62	□□□□□ -1.67
MSB3	YNL293W	YHR032W-A	P0C5N6	59 aa		4.62	□□□□□ -1.67
MSB3	YNL293W	RDS3	Q06835	107 aa	Predicted RBP	4.6	□□□□□ -1.67
MSB3	YNL293W	URA2	P07259	2214 aa	Known RBP	4.58	□□□□□ -1.68
MSB3	YNL293W	YJR128W	P47162	119 aa		4.58	□□□□□ -1.68
MSB3	YNL293W	YGR240C-A	Q3E786	66 aa		4.58	□□□□□ -1.68
MSB3	YNL293W	TAR1	Q8TGM6	124 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms