RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W MSA2P36157 363 aa3.86□□□□□ -1.79
CAF40YNL288W SFT1P43682 97 aa3.86□□□□□ -1.79
CAF40YNL288W YJR085CP47131 105 aaKnown RBP3.86□□□□□ -1.79
CAF40YNL288W YMR230W-AQ3E7B5 62 aa3.86□□□□□ -1.79
CAF40YNL288W YGL149WP53116 101 aa3.85□□□□□ -1.79
CAF40YNL288W YOR268CQ08734 132 aa3.85□□□□□ -1.79
CAF40YNL288W LSO2Q3E772 92 aaKnown RBP3.85□□□□□ -1.79
CAF40YNL288W MPC3P53311 146 aa3.83□□□□□ -1.8
CAF40YNL288W BSC4P53841 131 aa3.83□□□□□ -1.8
CAF40YNL288W YOR072WQ08486 104 aa3.83□□□□□ -1.8
CAF40YNL288W YDR010CQ12426 110 aa3.83□□□□□ -1.8
CAF40YNL288W YPR170W-BP0C5R9 85 aa3.82□□□□□ -1.8
CAF40YNL288W BET1P22804 142 aa3.82□□□□□ -1.8
CAF40YNL288W YNL198CP40166 100 aa3.81□□□□□ -1.8
CAF40YNL288W YHR007C-AQ07074 71 aa3.81□□□□□ -1.8
CAF40YNL288W RPL36BO14455 100 aaKnown RBP3.8□□□□□ -1.8
CAF40YNL288W OST2P46964 130 aa3.79□□□□□ -1.8
CAF40YNL288W YHR139C-AO13536 103 aa3.78□□□□□ -1.8
CAF40YNL288W KRE1P17260 313 aa3.78□□□□□ -1.8
CAF40YNL288W TSC3Q3E790 80 aa3.78□□□□□ -1.8
CAF40YNL288W YJR107C-AP0CT86 78 aa3.77□□□□□ -1.81
CAF40YNL288W YAR1P46683 200 aa3.77□□□□□ -1.81
CAF40YNL288W ATP18P81450 59 aa3.75□□□□□ -1.81
CAF40YNL288W KTI11Q3E840 82 aa3.75□□□□□ -1.81
CAF40YNL288W KSH1Q8TGJ3 72 aa3.75□□□□□ -1.81
CAF40YNL288W YNL184CP53876 108 aa3.74□□□□□ -1.81
CAF40YNL288W YBR027CP38220 110 aa3.73□□□□□ -1.81
CAF40YNL288W DSE2P38844 325 aa3.73□□□□□ -1.81
CAF40YNL288W TDA8Q6B2U8 126 aa3.73□□□□□ -1.81
CAF40YNL288W RSM18P40033 138 aa3.72□□□□□ -1.81
CAF40YNL288W YFR009W-AP0C5M9 85 aa3.71□□□□□ -1.82
CAF40YNL288W YJL197C-AP0C5P0 93 aa3.71□□□□□ -1.82
CAF40YNL288W RSM19P53733 91 aaPredicted RBP3.7□□□□□ -1.82
CAF40YNL288W YHR213W-BQ8TGK1 99 aa3.69□□□□□ -1.82
CAF40YNL288W YLR157W-DP0CE99 70 aa3.68□□□□□ -1.82
CAF40YNL288W YIL002W-AQ3E7Z5 69 aa3.68□□□□□ -1.82
CAF40YNL288W YJL133C-AQ3E7A3 74 aa3.67□□□□□ -1.82
CAF40YNL288W RPA12P32529 125 aaKnown RBP3.66□□□□□ -1.82
CAF40YNL288W ICS3P47034 131 aa3.66□□□□□ -1.82
CAF40YNL288W ECM19Q06011 112 aa3.66□□□□□ -1.82
CAF40YNL288W YLR162WQ06235 118 aa3.66□□□□□ -1.82
CAF40YNL288W YOL097W-AQ3E7Y9 61 aa3.66□□□□□ -1.82
CAF40YNL288W PBI2P0CT04 75 aaKnown RBP3.65□□□□□ -1.83
CAF40YNL288W YHL018WP38744 120 aaPredicted RBP3.65□□□□□ -1.83
CAF40YNL288W YHL005CP38752 130 aa3.65□□□□□ -1.83
CAF40YNL288W COX23P38824 151 aa3.65□□□□□ -1.83
CAF40YNL288W SHH4Q06236 168 aa3.65□□□□□ -1.83
CAF40YNL288W YDR381C-AQ3E6R5 114 aa3.65□□□□□ -1.83
CAF40YNL288W YAL063C-AQ3E791 96 aa3.65□□□□□ -1.83
CAF40YNL288W CMC4Q3E7A9 73 aa3.65□□□□□ -1.83
CAF40YNL288W ISD11Q6Q560 94 aa3.65□□□□□ -1.83
CAF40YNL288W YCR085WP25650 117 aa3.64□□□□□ -1.83
CAF40YNL288W MIC10Q96VH5 97 aa3.64□□□□□ -1.83
CAF40YNL288W YEL045CP32616 141 aa3.62□□□□□ -1.83
CAF40YNL288W TDA2P40045 126 aa3.62□□□□□ -1.83
CAF40YNL288W COX7P10174 60 aa3.6□□□□□ -1.83
CAF40YNL288W RPL38P49167 78 aaKnown RBP3.6□□□□□ -1.83
CAF40YNL288W ATX1P38636 73 aa3.59□□□□□ -1.83
CAF40YNL288W EDC1P53080 175 aaPredicted RBP3.59□□□□□ -1.83
CAF40YNL288W SKI6P46948 246 aaPredicted RBP3.57□□□□□ -1.84
CAF40YNL288W COF1Q03048 143 aaKnown RBP3.57□□□□□ -1.84
CAF40YNL288W YOL014WQ08110 124 aa3.57□□□□□ -1.84
CAF40YNL288W YHL042WP38729 150 aa3.56□□□□□ -1.84
CAF40YNL288W YOR304C-AO14468 76 aa3.55□□□□□ -1.84
CAF40YNL288W RAD6P06104 172 aa3.55□□□□□ -1.84
CAF40YNL288W YCR050CP25630 102 aa3.55□□□□□ -1.84
CAF40YNL288W YNL122CP53921 115 aaPredicted RBP3.55□□□□□ -1.84
CAF40YNL288W ATP20Q12233 115 aa3.54□□□□□ -1.84
CAF40YNL288W INO4P13902 151 aa3.53□□□□□ -1.84
CAF40YNL288W EMC6Q12431 108 aa3.53□□□□□ -1.84
CAF40YNL288W YER078W-AQ3E7A2 54 aa3.52□□□□□ -1.85
CAF40YNL288W HHF1P02309 103 aaKnown RBP3.51□□□□□ -1.85
CAF40YNL288W YHR073W-AP0C5N7 58 aa3.51□□□□□ -1.85
CAF40YNL288W YPL080CQ02826 108 aa3.51□□□□□ -1.85
CAF40YNL288W RPL36AP05745 100 aaPredicted RBP3.5□□□□□ -1.85
CAF40YNL288W YAR064WP39563 99 aa3.5□□□□□ -1.85
CAF40YNL288W YSY6P38374 65 aa3.48□□□□□ -1.85
CAF40YNL288W YER187WP40102 141 aa3.48□□□□□ -1.85
CAF40YNL288W RPL37BP51402 88 aaKnown RBP3.48□□□□□ -1.85
CAF40YNL288W YLR285C-AQ3E771 56 aa3.48□□□□□ -1.85
CAF40YNL288W YDL012CQ12489 107 aa3.47□□□□□ -1.85
CAF40YNL288W SLO1Q3E784 85 aa3.47□□□□□ -1.85
CAF40YNL288W YFL041W-AQ3E817 63 aa3.46□□□□□ -1.86
CAF40YNL288W YLR361C-AQ3E795 98 aa3.45□□□□□ -1.86
CAF40YNL288W YKL183C-AQ3E765 70 aa3.44□□□□□ -1.86
CAF40YNL288W YGR164WP53291 111 aa3.42□□□□□ -1.86
CAF40YNL288W YPR153WQ06537 140 aa3.42□□□□□ -1.86
CAF40YNL288W YOR316C-AQ3E806 69 aa3.4□□□□□ -1.87
CAF40YNL288W YFL065CP43539 102 aa3.39□□□□□ -1.87
CAF40YNL288W YPR203WQ08994 102 aa3.39□□□□□ -1.87
CAF40YNL288W YOR314WQ12506 109 aa3.37□□□□□ -1.87
CAF40YNL288W YGR039WP53225 103 aa3.36□□□□□ -1.87
CAF40YNL288W Q0017Q9ZZX8 53 aa3.36□□□□□ -1.87
CAF40YNL288W LIP1Q03579 150 aa3.35□□□□□ -1.87
CAF40YNL288W YIL102CP40488 101 aa3.34□□□□□ -1.87
CAF40YNL288W RUB1Q03919 77 aa3.34□□□□□ -1.87
CAF40YNL288W YOL013W-AP0C272 63 aaPredicted RBP3.33□□□□□ -1.88
CAF40YNL288W FYV12Q08559 129 aa3.33□□□□□ -1.88
CAF40YNL288W YJR128WP47162 119 aa3.32□□□□□ -1.88
CAF40YNL288W NOP10Q6Q547 58 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms