RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W YMR007WQ03675 126 aa2.08□□□□□ -2.08
SSU72YNL222W FIT2Q08906 153 aa2.08□□□□□ -2.08
SSU72YNL222W YDR182W-AQ3E796 67 aa2.08□□□□□ -2.08
SSU72YNL222W CMC4Q3E7A9 73 aa2.08□□□□□ -2.08
SSU72YNL222W YDL022C-AP0C5L6 82 aa2.07□□□□□ -2.08
SSU72YNL222W BSC4P53841 131 aa2.07□□□□□ -2.08
SSU72YNL222W YMR321CQ04898 105 aa2.07□□□□□ -2.08
SSU72YNL222W YLR236CA0A023PZG4 107 aa2.06□□□□□ -2.08
SSU72YNL222W YHR032W-AP0C5N6 59 aa2.06□□□□□ -2.08
SSU72YNL222W YBR027CP38220 110 aa2.06□□□□□ -2.08
SSU72YNL222W CCW12Q12127 133 aa2.05□□□□□ -2.08
SSU72YNL222W COA3Q3E7B2 85 aa2.05□□□□□ -2.08
SSU72YNL222W YNL042W-BQ3E7Z2 85 aa2.05□□□□□ -2.08
SSU72YNL222W YOL166W-AQ8TGJ1 51 aa2.05□□□□□ -2.08
SSU72YNL222W HUA1P40325 198 aa2.04□□□□□ -2.08
SSU72YNL222W DAD4P69851 72 aa2.04□□□□□ -2.08
SSU72YNL222W FIG2P25653 1609 aa2.03□□□□□ -2.08
SSU72YNL222W RPS11AP0CX47 156 aaKnown RBP2.03□□□□□ -2.08
SSU72YNL222W RPS11BP0CX48 156 aaKnown RBP2.03□□□□□ -2.08
SSU72YNL222W YEL014CP39999 101 aa2.03□□□□□ -2.08
SSU72YNL222W COX8P04039 78 aa2.02□□□□□ -2.09
SSU72YNL222W YBR219CP38317 127 aa2.02□□□□□ -2.09
SSU72YNL222W SHU1P38751 150 aa2.02□□□□□ -2.09
SSU72YNL222W CCW14O13547 238 aa2.01□□□□□ -2.09
SSU72YNL222W RPL33BP41056 107 aaKnown RBP2.01□□□□□ -2.09
SSU72YNL222W RPL38P49167 78 aaKnown RBP2.01□□□□□ -2.09
SSU72YNL222W YCL048W-AQ2V2Q2 79 aa2.01□□□□□ -2.09
SSU72YNL222W YIL102CP40488 101 aa2□□□□□ -2.09
SSU72YNL222W TOM7P53507 60 aa2□□□□□ -2.09
SSU72YNL222W ATP17Q06405 101 aa2□□□□□ -2.09
SSU72YNL222W HUB1Q6Q546 73 aa2□□□□□ -2.09
SSU72YNL222W YJR107C-AP0CT86 78 aa1.99□□□□□ -2.09
SSU72YNL222W MRPS12P53732 153 aa1.99□□□□□ -2.09
SSU72YNL222W MGR2Q02889 113 aa1.99□□□□□ -2.09
SSU72YNL222W SGF11Q03067 99 aa1.99□□□□□ -2.09
SSU72YNL222W LCL2Q08045 131 aa1.99□□□□□ -2.09
SSU72YNL222W YGL014C-AP0C5N1 53 aa1.98□□□□□ -2.09
SSU72YNL222W AQY2P0CD90 149 aa1.98□□□□□ -2.09
SSU72YNL222W YCR001WP25347 104 aa1.98□□□□□ -2.09
SSU72YNL222W YDR210WQ03482 75 aa1.98□□□□□ -2.09
SSU72YNL222W HUG1Q6Q5K6 68 aa1.98□□□□□ -2.09
SSU72YNL222W YSF3P0C074 85 aaPredicted RBP1.97□□□□□ -2.09
SSU72YNL222W YLR157W-DP0CE99 70 aa1.97□□□□□ -2.09
SSU72YNL222W TOS6P48560 102 aa1.97□□□□□ -2.09
SSU72YNL222W YNL122CP53921 115 aaPredicted RBP1.97□□□□□ -2.09
SSU72YNL222W ATP18P81450 59 aa1.96□□□□□ -2.1
SSU72YNL222W SDH6Q3E785 79 aa1.96□□□□□ -2.1
SSU72YNL222W YMR001C-AQ8TGS9 76 aa1.96□□□□□ -2.1
SSU72YNL222W YMR122W-AQ3E842 84 aa1.95□□□□□ -2.1
SSU72YNL222W BPH1P25356 2167 aa1.94□□□□□ -2.1
SSU72YNL222W YMR141CP40211 102 aa1.94□□□□□ -2.1
SSU72YNL222W YPR108W-AQ3E7B3 70 aa1.94□□□□□ -2.1
SSU72YNL222W CDC39P25655 2108 aaKnown RBP1.93□□□□□ -2.1
SSU72YNL222W YPR010C-AA5Z2X5 72 aa1.93□□□□□ -2.1
SSU72YNL222W YBR201C-AQ2V2Q3 67 aa1.93□□□□□ -2.1
SSU72YNL222W FLO1P32768 1537 aa1.92□□□□□ -2.1
SSU72YNL222W RPL33AP05744 107 aaKnown RBP1.92□□□□□ -2.1
SSU72YNL222W YGL041C-BQ3E750 60 aa1.92□□□□□ -2.1
SSU72YNL222W YOR008C-AQ3E7B9 74 aa1.92□□□□□ -2.1
SSU72YNL222W TAR1Q8TGM6 124 aa1.92□□□□□ -2.1
SSU72YNL222W YLR255CO13574 117 aa1.91□□□□□ -2.1
SSU72YNL222W YFR009W-AP0C5M9 85 aa1.91□□□□□ -2.1
SSU72YNL222W MVB12P42939 101 aa1.91□□□□□ -2.1
SSU72YNL222W Q0032Q9ZZX7 96 aa1.91□□□□□ -2.1
SSU72YNL222W YBL039W-BP0C268 59 aa1.9□□□□□ -2.11
SSU72YNL222W YOL013W-AP0C272 63 aaPredicted RBP1.9□□□□□ -2.11
SSU72YNL222W FAS1P07149 2051 aaKnown RBP1.89□□□□□ -2.11
SSU72YNL222W VAM10Q08474 114 aa1.89□□□□□ -2.11
SSU72YNL222W YGR240C-AQ3E786 66 aa1.88□□□□□ -2.11
SSU72YNL222W YHR007C-AQ07074 71 aa1.87□□□□□ -2.11
SSU72YNL222W YGL258W-AQ3E740 77 aa1.87□□□□□ -2.11
SSU72YNL222W YLR342W-AQ3E810 57 aa1.87□□□□□ -2.11
SSU72YNL222W YEL008WP40001 126 aa1.86□□□□□ -2.11
SSU72YNL222W YOR072WQ08486 104 aa1.86□□□□□ -2.11
SSU72YNL222W YOL097W-AQ3E7Y9 61 aa1.86□□□□□ -2.11
SSU72YNL222W BRR2P32639 2163 aaKnown RBP1.86□□□□□ -2.11
SSU72YNL222W YGR025WP53216 100 aa1.84□□□□□ -2.11
SSU72YNL222W YBR200W-AQ3E755 54 aa1.84□□□□□ -2.11
SSU72YNL222W YLL006W-AQ3E814 58 aa1.84□□□□□ -2.11
SSU72YNL222W YCL042WP25572 119 aa1.83□□□□□ -2.12
SSU72YNL222W YIL086CP40503 102 aa1.83□□□□□ -2.12
SSU72YNL222W LCL1Q02786 101 aa1.83□□□□□ -2.12
SSU72YNL222W YHR213W-BQ8TGK1 99 aa1.83□□□□□ -2.12
SSU72YNL222W AUA1P32450 94 aa1.82□□□□□ -2.12
SSU72YNL222W YJR128WP47162 119 aa1.82□□□□□ -2.12
SSU72YNL222W YOR011W-AQ3E807 68 aa1.82□□□□□ -2.12
SSU72YNL222W YJL133C-AQ3E7A3 74 aa1.81□□□□□ -2.12
SSU72YNL222W COX7P10174 60 aa1.8□□□□□ -2.12
SSU72YNL222W SIP18P50263 79 aa1.78□□□□□ -2.12
SSU72YNL222W YOR394C-AQ8TGJ0 55 aa1.78□□□□□ -2.12
SSU72YNL222W RPL43AP0CX25 92 aaKnown RBP1.77□□□□□ -2.13
SSU72YNL222W RPL43BP0CX26 92 aa1.77□□□□□ -2.13
SSU72YNL222W YAR064WP39563 99 aa1.77□□□□□ -2.13
SSU72YNL222W BLM10P43583 2143 aa1.75□□□□□ -2.13
SSU72YNL222W ACC1Q00955 2233 aaKnown RBP1.74□□□□□ -2.13
SSU72YNL222W YBR230W-AQ3E762 66 aa1.74□□□□□ -2.13
SSU72YNL222W YJL127C-BQ3E828 52 aa1.74□□□□□ -2.13
SSU72YNL222W RPS27AP35997 82 aaKnown RBP1.73□□□□□ -2.13
SSU72YNL222W RPC10P40422 70 aa1.73□□□□□ -2.13
SSU72YNL222W YJL009WP47078 108 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms