RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W TY2B-GR2P0CX64 1770 aa0.93□□□□□ -2.26
SRP1YNL189W TY2B-CP25384 1770 aa0.93□□□□□ -2.26
SRP1YNL189W TY2B-DR2Q03494 1770 aa0.93□□□□□ -2.26
SRP1YNL189W TY2B-DR3Q07791 1770 aaKnown RBP0.93□□□□□ -2.26
SRP1YNL189W TY2B-OR1Q12113 1770 aa0.93□□□□□ -2.26
SRP1YNL189W TY2B-DR1Q12472 1770 aa0.93□□□□□ -2.26
SRP1YNL189W TY2B-BQ12491 1770 aa0.93□□□□□ -2.26
SRP1YNL189W TY2B-OR2Q12501 1770 aa0.93□□□□□ -2.26
SRP1YNL189W YDL022C-AP0C5L6 82 aa0.93□□□□□ -2.26
SRP1YNL189W FPR2P32472 135 aa0.93□□□□□ -2.26
SRP1YNL189W ERI1P62651 68 aaKnown RBP0.93□□□□□ -2.26
SRP1YNL189W YNL042W-BQ3E7Z2 85 aa0.93□□□□□ -2.26
SRP1YNL189W YMR122W-AQ3E842 84 aa0.93□□□□□ -2.26
SRP1YNL189W SEC16P48415 2195 aaKnown RBP0.92□□□□□ -2.26
SRP1YNL189W ARO1P08566 1588 aaKnown RBP0.92□□□□□ -2.26
SRP1YNL189W IRC20Q06554 1556 aa0.92□□□□□ -2.26
SRP1YNL189W SPO14P36126 1683 aa0.92□□□□□ -2.26
SRP1YNL189W VTH1P40438 1549 aa0.92□□□□□ -2.26
SRP1YNL189W VTH2P40890 1549 aa0.92□□□□□ -2.26
SRP1YNL189W TY3B-GQ99315 1547 aa0.92□□□□□ -2.26
SRP1YNL189W YSY6P38374 65 aa0.91□□□□□ -2.26
SRP1YNL189W APC1P53886 1748 aa0.9□□□□□ -2.26
SRP1YNL189W PAU7P39545 55 aa0.9□□□□□ -2.26
SRP1YNL189W YJR128WP47162 119 aa0.9□□□□□ -2.26
SRP1YNL189W YKL023C-AQ2V2P3 75 aa0.9□□□□□ -2.26
SRP1YNL189W CDC25P04821 1589 aa0.9□□□□□ -2.27
SRP1YNL189W BPH1P25356 2167 aa0.9□□□□□ -2.27
SRP1YNL189W POL2P21951 2222 aaKnown RBP0.89□□□□□ -2.27
SRP1YNL189W YBR201C-AQ2V2Q3 67 aa0.89□□□□□ -2.27
SRP1YNL189W YDR182W-AQ3E796 67 aa0.89□□□□□ -2.27
SRP1YNL189W YOL097W-AQ3E7Y9 61 aa0.89□□□□□ -2.27
SRP1YNL189W DNF2Q12675 1612 aa0.89□□□□□ -2.27
SRP1YNL189W PEP1P32319 1579 aa0.89□□□□□ -2.27
SRP1YNL189W YMR141CP40211 102 aa0.89□□□□□ -2.27
SRP1YNL189W RIM15P43565 1770 aa0.88□□□□□ -2.27
SRP1YNL189W COX7P10174 60 aa0.88□□□□□ -2.27
SRP1YNL189W ATP17Q06405 101 aa0.88□□□□□ -2.27
SRP1YNL189W YHR213W-BQ8TGK1 99 aa0.88□□□□□ -2.27
SRP1YNL189W Q0032Q9ZZX7 96 aa0.88□□□□□ -2.27
SRP1YNL189W URA2P07259 2214 aaKnown RBP0.88□□□□□ -2.27
SRP1YNL189W ATP18P81450 59 aa0.87□□□□□ -2.27
SRP1YNL189W YOR032W-AQ8TGS1 66 aa0.87□□□□□ -2.27
SRP1YNL189W ULS1Q08562 1619 aa0.87□□□□□ -2.27
SRP1YNL189W YBT1P32386 1661 aa0.87□□□□□ -2.27
SRP1YNL189W VMR1P38735 1592 aa0.86□□□□□ -2.27
SRP1YNL189W BLM10P43583 2143 aa0.86□□□□□ -2.27
SRP1YNL189W AUA1P32450 94 aa0.86□□□□□ -2.27
SRP1YNL189W SGF11Q03067 99 aa0.86□□□□□ -2.27
SRP1YNL189W YOR034C-AQ3E735 80 aa0.86□□□□□ -2.27
SRP1YNL189W YKL018C-AQ3E7A7 99 aa0.86□□□□□ -2.27
SRP1YNL189W YOL166W-AQ8TGJ1 51 aa0.86□□□□□ -2.27
SRP1YNL189W NUP188P52593 1655 aaKnown RBP0.85□□□□□ -2.27
SRP1YNL189W YBR072C-AQ3E794 53 aa0.85□□□□□ -2.27
SRP1YNL189W HUB1Q6Q546 73 aa0.85□□□□□ -2.27
SRP1YNL189W SNF2P22082 1703 aa0.85□□□□□ -2.27
SRP1YNL189W RPL43AP0CX25 92 aaKnown RBP0.84□□□□□ -2.28
SRP1YNL189W RPL43BP0CX26 92 aa0.84□□□□□ -2.28
SRP1YNL189W RPS30AP0CX33 63 aaKnown RBP0.84□□□□□ -2.28
SRP1YNL189W RPS30BP0CX34 63 aaKnown RBP0.84□□□□□ -2.28
SRP1YNL189W SDH6Q3E785 79 aa0.84□□□□□ -2.28
SRP1YNL189W STU1P38198 1513 aa0.83□□□□□ -2.28
SRP1YNL189W YNL190WP53872 204 aa0.83□□□□□ -2.28
SRP1YNL189W YOR093CQ12275 1648 aa0.83□□□□□ -2.28
SRP1YNL189W RPL38P49167 78 aaKnown RBP0.82□□□□□ -2.28
SRP1YNL189W EDC1P53080 175 aaPredicted RBP0.82□□□□□ -2.28
SRP1YNL189W YBR032WP38223 100 aa0.82□□□□□ -2.28
SRP1YNL189W THO2P53552 1597 aaKnown RBP0.81□□□□□ -2.28
SRP1YNL189W USO1P25386 1790 aa0.81□□□□□ -2.28
SRP1YNL189W PRP8P33334 2413 aaKnown RBP0.81□□□□□ -2.28
SRP1YNL189W YLR157W-EP0CF00 54 aa0.81□□□□□ -2.28
SRP1YNL189W YPR108W-AQ3E7B3 70 aa0.81□□□□□ -2.28
SRP1YNL189W YJR107C-AP0CT86 78 aa0.8□□□□□ -2.28
SRP1YNL189W RPC10P40422 70 aa0.8□□□□□ -2.28
SRP1YNL189W PDR15Q04182 1529 aaKnown RBP0.8□□□□□ -2.28
SRP1YNL189W YLR307C-AQ3E825 87 aa0.8□□□□□ -2.28
SRP1YNL189W YOR011W-AQ3E807 68 aa0.79□□□□□ -2.28
SRP1YNL189W YOR192C-CQ3E736 78 aa0.78□□□□□ -2.28
SRP1YNL189W YBR200W-AQ3E755 54 aa0.78□□□□□ -2.28
SRP1YNL189W KOG1P38873 1557 aa0.78□□□□□ -2.28
SRP1YNL189W NUP170P38181 1502 aa0.78□□□□□ -2.28
SRP1YNL189W YBL039W-BP0C268 59 aa0.78□□□□□ -2.29
SRP1YNL189W HKR1P41809 1802 aa0.77□□□□□ -2.29
SRP1YNL189W YMR001C-AQ8TGS9 76 aa0.77□□□□□ -2.29
SRP1YNL189W RKR1Q04781 1562 aa0.77□□□□□ -2.29
SRP1YNL189W MLP2P40457 1679 aa0.76□□□□□ -2.29
SRP1YNL189W NUP192P47054 1683 aa0.76□□□□□ -2.29
SRP1YNL189W RPS27AP35997 82 aaKnown RBP0.76□□□□□ -2.29
SRP1YNL189W YLR146W-AQ2V2P1 62 aa0.76□□□□□ -2.29
SRP1YNL189W YOR394C-AQ8TGJ0 55 aa0.76□□□□□ -2.29
SRP1YNL189W YLR157W-DP0CE99 70 aa0.75□□□□□ -2.29
SRP1YNL189W HIR3P47171 1648 aa0.73□□□□□ -2.29
SRP1YNL189W YBR016WP38216 128 aa0.73□□□□□ -2.29
SRP1YNL189W CHC1P22137 1653 aaKnown RBP0.73□□□□□ -2.29
SRP1YNL189W YOL164W-AQ3E7A5 60 aa0.72□□□□□ -2.29
SRP1YNL189W BUD3P25558 1636 aa0.72□□□□□ -2.29
SRP1YNL189W SMX2P40204 77 aaKnown RBP0.71□□□□□ -2.3
SRP1YNL189W YGR025WP53216 100 aa0.71□□□□□ -2.3
SRP1YNL189W OLI1P61829 76 aa0.71□□□□□ -2.3
SRP1YNL189W YBR230W-AQ3E762 66 aa0.71□□□□□ -2.3
SRP1YNL189W YBL044WP38194 122 aa0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms