RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W MPC2P38857 129 aa4.63□□□□□ -1.67
HDA1YNL021W YBR200W-AQ3E755 54 aa4.63□□□□□ -1.67
HDA1YNL021W YGR035W-AQ45U48 73 aa4.63□□□□□ -1.67
HDA1YNL021W TAR1Q8TGM6 124 aa4.63□□□□□ -1.67
HDA1YNL021W PFY1P07274 126 aa4.63□□□□□ -1.67
HDA1YNL021W COX8P04039 78 aa4.62□□□□□ -1.67
HDA1YNL021W MGR2Q02889 113 aa4.62□□□□□ -1.67
HDA1YNL021W NAT5Q08689 176 aa4.61□□□□□ -1.67
HDA1YNL021W YDL157CQ12082 118 aa4.6□□□□□ -1.67
HDA1YNL021W YML079WQ03629 201 aa4.6□□□□□ -1.67
HDA1YNL021W RPS11AP0CX47 156 aaKnown RBP4.59□□□□□ -1.67
HDA1YNL021W RPS11BP0CX48 156 aaKnown RBP4.59□□□□□ -1.67
HDA1YNL021W ATX1P38636 73 aa4.59□□□□□ -1.67
HDA1YNL021W TOM6P33448 61 aa4.58□□□□□ -1.68
HDA1YNL021W TOS6P48560 102 aa4.58□□□□□ -1.68
HDA1YNL021W YDR119W-AQ2V2P9 66 aa4.58□□□□□ -1.68
HDA1YNL021W PAU23Q07987 124 aa4.58□□□□□ -1.68
HDA1YNL021W PAU17Q12370 124 aa4.58□□□□□ -1.68
HDA1YNL021W YGL149WP53116 101 aa4.57□□□□□ -1.68
HDA1YNL021W RSM18P40033 138 aa4.57□□□□□ -1.68
HDA1YNL021W DCV1P43595 202 aa4.57□□□□□ -1.68
HDA1YNL021W ICY1Q04329 127 aa4.57□□□□□ -1.68
HDA1YNL021W OST5Q92316 86 aa4.57□□□□□ -1.68
HDA1YNL021W YOR008C-AQ3E7B9 74 aa4.56□□□□□ -1.68
HDA1YNL021W CMC4Q3E7A9 73 aa4.55□□□□□ -1.68
HDA1YNL021W HMRA2P0CY13 119 aa4.54□□□□□ -1.68
HDA1YNL021W COA3Q3E7B2 85 aa4.54□□□□□ -1.68
HDA1YNL021W YHL005CP38752 130 aa4.52□□□□□ -1.69
HDA1YNL021W ICS3P47034 131 aa4.52□□□□□ -1.69
HDA1YNL021W COX12Q01519 83 aa4.52□□□□□ -1.69
HDA1YNL021W YPR153WQ06537 140 aa4.52□□□□□ -1.69
HDA1YNL021W PMP3P87284 55 aa4.51□□□□□ -1.69
HDA1YNL021W YJL144WP47009 104 aa4.51□□□□□ -1.69
HDA1YNL021W RGM1Q00453 211 aa4.51□□□□□ -1.69
HDA1YNL021W YNL198CP40166 100 aa4.5□□□□□ -1.69
HDA1YNL021W YGR240C-AQ3E786 66 aa4.49□□□□□ -1.69
HDA1YNL021W RTC6O14464 93 aa4.48□□□□□ -1.69
HDA1YNL021W YDR381C-AQ3E6R5 114 aa4.48□□□□□ -1.69
HDA1YNL021W YCR001WP25347 104 aa4.47□□□□□ -1.69
HDA1YNL021W VAM10Q08474 114 aa4.47□□□□□ -1.69
HDA1YNL021W YLR194CQ05777 254 aa4.46□□□□□ -1.69
HDA1YNL021W COX23P38824 151 aa4.46□□□□□ -1.7
HDA1YNL021W YDL012CQ12489 107 aa4.46□□□□□ -1.7
HDA1YNL021W YJL197C-AP0C5P0 93 aa4.45□□□□□ -1.7
HDA1YNL021W SGF11Q03067 99 aa4.45□□□□□ -1.7
HDA1YNL021W YDL022C-AP0C5L6 82 aa4.45□□□□□ -1.7
HDA1YNL021W YEL008WP40001 126 aa4.45□□□□□ -1.7
HDA1YNL021W YFL041W-AQ3E817 63 aa4.45□□□□□ -1.7
HDA1YNL021W RPL36BO14455 100 aaKnown RBP4.44□□□□□ -1.7
HDA1YNL021W RPL36AP05745 100 aaPredicted RBP4.44□□□□□ -1.7
HDA1YNL021W ERI1P62651 68 aaKnown RBP4.43□□□□□ -1.7
HDA1YNL021W SHU1P38751 150 aa4.43□□□□□ -1.7
HDA1YNL021W YMR122W-AQ3E842 84 aa4.43□□□□□ -1.7
HDA1YNL021W YPL038W-AQ3E7B4 63 aa4.42□□□□□ -1.7
HDA1YNL021W NHP2P32495 156 aaPredicted RBP4.42□□□□□ -1.7
HDA1YNL021W MRPS12P53732 153 aa4.41□□□□□ -1.7
HDA1YNL021W DSE2P38844 325 aa4.4□□□□□ -1.7
HDA1YNL021W YEL014CP39999 101 aa4.4□□□□□ -1.7
HDA1YNL021W HPA2Q06592 156 aa4.4□□□□□ -1.7
HDA1YNL021W YKL023C-AQ2V2P3 75 aa4.4□□□□□ -1.7
HDA1YNL021W QCR8P08525 94 aa4.4□□□□□ -1.71
HDA1YNL021W YIL102C-AQ2V2P5 75 aa4.39□□□□□ -1.71
HDA1YNL021W DYN1P36022 4092 aa4.38□□□□□ -1.71
HDA1YNL021W YPR010C-AA5Z2X5 72 aa4.37□□□□□ -1.71
HDA1YNL021W SPC1P46965 94 aa4.37□□□□□ -1.71
HDA1YNL021W YBR219CP38317 127 aa4.36□□□□□ -1.71
HDA1YNL021W LSM6Q06406 86 aaKnown RBP4.36□□□□□ -1.71
HDA1YNL021W RPL33AP05744 107 aaKnown RBP4.36□□□□□ -1.71
HDA1YNL021W AUA1P32450 94 aa4.36□□□□□ -1.71
HDA1YNL021W YNL190WP53872 204 aa4.34□□□□□ -1.71
HDA1YNL021W YHR007C-AQ07074 71 aa4.34□□□□□ -1.71
HDA1YNL021W UTP20P35194 2493 aaKnown RBP4.33□□□□□ -1.72
HDA1YNL021W YBR027CP38220 110 aa4.33□□□□□ -1.72
HDA1YNL021W RPC10P40422 70 aa4.33□□□□□ -1.72
HDA1YNL021W YCR095W-AQ3E787 52 aa4.33□□□□□ -1.72
HDA1YNL021W YAL065CO13511 128 aa4.31□□□□□ -1.72
HDA1YNL021W YLR285C-AQ3E771 56 aa4.3□□□□□ -1.72
HDA1YNL021W YLL066W-BQ8TGJ7 56 aa4.3□□□□□ -1.72
HDA1YNL021W YLL006W-AQ3E814 58 aa4.3□□□□□ -1.72
HDA1YNL021W YOR314WQ12506 109 aa4.29□□□□□ -1.72
HDA1YNL021W SNA2P56508 79 aa4.27□□□□□ -1.73
HDA1YNL021W GIS2P53849 153 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
HDA1YNL021W YER188C-AP0C0V2 99 aa4.25□□□□□ -1.73
HDA1YNL021W RPL29P05747 59 aaPredicted RBP4.25□□□□□ -1.73
HDA1YNL021W MVB12P42939 101 aa4.25□□□□□ -1.73
HDA1YNL021W IRC21Q04772 201 aa4.25□□□□□ -1.73
HDA1YNL021W AQY2P0CD90 149 aa4.24□□□□□ -1.73
HDA1YNL021W YLR162WQ06235 118 aa4.24□□□□□ -1.73
HDA1YNL021W YBL039W-BP0C268 59 aa4.23□□□□□ -1.73
HDA1YNL021W YKL065W-AQ2V2P2 73 aa4.23□□□□□ -1.73
HDA1YNL021W YGR121W-AQ3E816 71 aa4.22□□□□□ -1.73
HDA1YNL021W YGL014C-AP0C5N1 53 aa4.22□□□□□ -1.73
HDA1YNL021W YHR086W-AQ3E746 53 aa4.22□□□□□ -1.73
HDA1YNL021W MRX7P53869 86 aa4.21□□□□□ -1.74
HDA1YNL021W AIM19P40502 157 aa4.2□□□□□ -1.74
HDA1YNL021W AIM4P38305 123 aaPredicted RBP4.19□□□□□ -1.74
HDA1YNL021W YMR122CQ03879 124 aa4.19□□□□□ -1.74
HDA1YNL021W YOR034C-AQ3E735 80 aa4.18□□□□□ -1.74
HDA1YNL021W YGL041C-BQ3E750 60 aa4.16□□□□□ -1.74
HDA1YNL021W YSY6P38374 65 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms