RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W YOR105WQ08504 108 aa2.66□□□□□ -1.98
ROT1YMR200W YAR064WP39563 99 aa2.65□□□□□ -1.99
ROT1YMR200W YDR010CQ12426 110 aa2.65□□□□□ -1.99
ROT1YMR200W YGR121W-AQ3E816 71 aa2.65□□□□□ -1.99
ROT1YMR200W SLH1P53327 1967 aaKnown RBP2.65□□□□□ -1.99
ROT1YMR200W PAU20Q08322 120 aa2.64□□□□□ -1.99
ROT1YMR200W PMD1P32634 1753 aa2.64□□□□□ -1.99
ROT1YMR200W YCR001WP25347 104 aa2.63□□□□□ -1.99
ROT1YMR200W LCL1Q02786 101 aa2.63□□□□□ -1.99
ROT1YMR200W MGR2Q02889 113 aa2.63□□□□□ -1.99
ROT1YMR200W FIG2P25653 1609 aa2.62□□□□□ -1.99
ROT1YMR200W TIM12P32830 109 aa2.62□□□□□ -1.99
ROT1YMR200W QCR9P22289 66 aa2.61□□□□□ -1.99
ROT1YMR200W YIL086CP40503 102 aa2.61□□□□□ -1.99
ROT1YMR200W YIL156W-BQ2V2P4 73 aa2.61□□□□□ -1.99
ROT1YMR200W COX19Q3E731 98 aa2.61□□□□□ -1.99
ROT1YMR200W NOP10Q6Q547 58 aaPredicted RBP2.61□□□□□ -1.99
ROT1YMR200W YOL013W-AP0C272 63 aaPredicted RBP2.6□□□□□ -1.99
ROT1YMR200W FPR2P32472 135 aa2.6□□□□□ -1.99
ROT1YMR200W YNL198CP40166 100 aa2.6□□□□□ -1.99
ROT1YMR200W HKR1P41809 1802 aa2.6□□□□□ -1.99
ROT1YMR200W HUG1Q6Q5K6 68 aa2.59□□□□□ -1.99
ROT1YMR200W BRR2P32639 2163 aaKnown RBP2.59□□□□□ -2
ROT1YMR200W TOM1Q03280 3268 aa2.58□□□□□ -2
ROT1YMR200W SHU1P38751 150 aa2.57□□□□□ -2
ROT1YMR200W YGR035W-AQ45U48 73 aa2.57□□□□□ -2
ROT1YMR200W YHR173CP38864 112 aa2.56□□□□□ -2
ROT1YMR200W MVB12P42939 101 aa2.56□□□□□ -2
ROT1YMR200W VMA9Q3E7B6 73 aa2.56□□□□□ -2
ROT1YMR200W FLO1P32768 1537 aa2.56□□□□□ -2
ROT1YMR200W SPI1P40092 148 aa2.54□□□□□ -2
ROT1YMR200W YIL102CP40488 101 aa2.54□□□□□ -2
ROT1YMR200W YMR007WQ03675 126 aa2.54□□□□□ -2
ROT1YMR200W YNL042W-BQ3E7Z2 85 aa2.53□□□□□ -2
ROT1YMR200W YIL134C-AQ45U18 67 aa2.52□□□□□ -2.01
ROT1YMR200W TAO3P40468 2376 aa2.51□□□□□ -2.01
ROT1YMR200W SMX2P40204 77 aaKnown RBP2.51□□□□□ -2.01
ROT1YMR200W YJR128WP47162 119 aa2.51□□□□□ -2.01
ROT1YMR200W YMR122W-AQ3E842 84 aa2.51□□□□□ -2.01
ROT1YMR200W YDL022C-AP0C5L6 82 aa2.5□□□□□ -2.01
ROT1YMR200W YIL102C-AQ2V2P5 75 aa2.5□□□□□ -2.01
ROT1YMR200W STT4P37297 1900 aa2.5□□□□□ -2.01
ROT1YMR200W ERI1P62651 68 aaKnown RBP2.49□□□□□ -2.01
ROT1YMR200W MOT1P32333 1867 aa2.48□□□□□ -2.01
ROT1YMR200W YBR201C-AQ2V2Q3 67 aa2.48□□□□□ -2.01
ROT1YMR200W YDR246W-AQ3E763 66 aa2.47□□□□□ -2.01
ROT1YMR200W HFA1P32874 2273 aa2.47□□□□□ -2.01
ROT1YMR200W Q0032Q9ZZX7 96 aa2.46□□□□□ -2.02
ROT1YMR200W YPR117WQ06116 2489 aa2.46□□□□□ -2.02
ROT1YMR200W SEC16P48415 2195 aaKnown RBP2.46□□□□□ -2.02
ROT1YMR200W YBR032WP38223 100 aa2.45□□□□□ -2.02
ROT1YMR200W YSY6P38374 65 aa2.45□□□□□ -2.02
ROT1YMR200W PAU7P39545 55 aa2.45□□□□□ -2.02
ROT1YMR200W YDR524C-BQ3E6R4 66 aa2.45□□□□□ -2.02
ROT1YMR200W HHY1P39982 102 aa2.43□□□□□ -2.02
ROT1YMR200W VPS13Q07878 3144 aa2.42□□□□□ -2.02
ROT1YMR200W YDR034W-BQ6Q5X2 51 aa2.42□□□□□ -2.02
ROT1YMR200W ATP18P81450 59 aa2.41□□□□□ -2.02
ROT1YMR200W SGF11Q03067 99 aa2.41□□□□□ -2.02
ROT1YMR200W YOR032W-AQ8TGS1 66 aa2.41□□□□□ -2.02
ROT1YMR200W COX7P10174 60 aa2.4□□□□□ -2.03
ROT1YMR200W ATP17Q06405 101 aa2.4□□□□□ -2.03
ROT1YMR200W YKL018C-AQ3E7A7 99 aa2.4□□□□□ -2.03
ROT1YMR200W YHR213W-BQ8TGK1 99 aa2.4□□□□□ -2.03
ROT1YMR200W HUA1P40325 198 aa2.39□□□□□ -2.03
ROT1YMR200W YMR141CP40211 102 aa2.38□□□□□ -2.03
ROT1YMR200W YOL097W-AQ3E7Y9 61 aa2.38□□□□□ -2.03
ROT1YMR200W POL2P21951 2222 aaKnown RBP2.37□□□□□ -2.03
ROT1YMR200W BPH1P25356 2167 aa2.36□□□□□ -2.03
ROT1YMR200W YOR034C-AQ3E735 80 aa2.34□□□□□ -2.03
ROT1YMR200W YBR072C-AQ3E794 53 aa2.34□□□□□ -2.03
ROT1YMR200W YDR182W-AQ3E796 67 aa2.34□□□□□ -2.03
ROT1YMR200W TOR2P32600 2474 aaKnown RBP2.33□□□□□ -2.04
ROT1YMR200W YNL190WP53872 204 aa2.33□□□□□ -2.04
ROT1YMR200W SDH6Q3E785 79 aa2.33□□□□□ -2.04
ROT1YMR200W YKL023C-AQ2V2P3 75 aa2.32□□□□□ -2.04
ROT1YMR200W RPL38P49167 78 aaKnown RBP2.31□□□□□ -2.04
ROT1YMR200W BEM2P39960 2167 aaKnown RBP2.29□□□□□ -2.04
ROT1YMR200W RPS30AP0CX33 63 aaKnown RBP2.28□□□□□ -2.04
ROT1YMR200W RPS30BP0CX34 63 aaKnown RBP2.28□□□□□ -2.04
ROT1YMR200W AUA1P32450 94 aa2.28□□□□□ -2.04
ROT1YMR200W RPC10P40422 70 aa2.28□□□□□ -2.04
ROT1YMR200W HUB1Q6Q546 73 aa2.28□□□□□ -2.04
ROT1YMR200W BLM10P43583 2143 aa2.27□□□□□ -2.05
ROT1YMR200W YPR108W-AQ3E7B3 70 aa2.27□□□□□ -2.05
ROT1YMR200W TOR1P35169 2470 aa2.25□□□□□ -2.05
ROT1YMR200W EDC1P53080 175 aaPredicted RBP2.24□□□□□ -2.05
ROT1YMR200W FMP27Q06179 2628 aa2.24□□□□□ -2.05
ROT1YMR200W URA2P07259 2214 aaKnown RBP2.23□□□□□ -2.05
ROT1YMR200W SEN1Q00416 2231 aaKnown RBP2.23□□□□□ -2.05
ROT1YMR200W YOL166W-AQ8TGJ1 51 aa2.22□□□□□ -2.05
ROT1YMR200W RPL43AP0CX25 92 aaKnown RBP2.21□□□□□ -2.06
ROT1YMR200W RPL43BP0CX26 92 aa2.21□□□□□ -2.06
ROT1YMR200W TEL1P38110 2787 aa2.21□□□□□ -2.06
ROT1YMR200W COX9P07255 59 aa2.19□□□□□ -2.06
ROT1YMR200W YJR107C-AP0CT86 78 aa2.18□□□□□ -2.06
ROT1YMR200W RPL37AP49166 88 aaKnown RBP2.17□□□□□ -2.06
ROT1YMR200W YLR146W-AQ2V2P1 62 aa2.17□□□□□ -2.06
ROT1YMR200W IRA2P19158 3079 aa2.16□□□□□ -2.06
ROT1YMR200W YBL039W-BP0C268 59 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms