RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YBR056W-AI2HB52 66 aa3.71□□□□□ -1.82
SPG4YMR107W RPS11AP0CX47 156 aaKnown RBP3.71□□□□□ -1.82
SPG4YMR107W RPS11BP0CX48 156 aaKnown RBP3.71□□□□□ -1.82
SPG4YMR107W RPL38P49167 78 aaKnown RBP3.71□□□□□ -1.82
SPG4YMR107W YMR122CQ03879 124 aa3.71□□□□□ -1.82
SPG4YMR107W YER188C-AP0C0V2 99 aa3.7□□□□□ -1.82
SPG4YMR107W RPS30AP0CX33 63 aaKnown RBP3.7□□□□□ -1.82
SPG4YMR107W RPS30BP0CX34 63 aaKnown RBP3.7□□□□□ -1.82
SPG4YMR107W TOS8P53147 276 aa3.7□□□□□ -1.82
SPG4YMR107W TIM10P87108 93 aa3.7□□□□□ -1.82
SPG4YMR107W YDL241WQ07738 123 aa3.7□□□□□ -1.82
SPG4YMR107W YLR307C-AQ3E825 87 aa3.7□□□□□ -1.82
SPG4YMR107W YPR117WQ06116 2489 aa3.69□□□□□ -1.82
SPG4YMR107W YBL081WP38180 368 aaKnown RBP3.69□□□□□ -1.82
SPG4YMR107W COX23P38824 151 aa3.69□□□□□ -1.82
SPG4YMR107W YGL034CP53186 121 aa3.69□□□□□ -1.82
SPG4YMR107W YOR381W-AQ3E804 55 aa3.69□□□□□ -1.82
SPG4YMR107W YEL045CP32616 141 aa3.68□□□□□ -1.82
SPG4YMR107W IGD1P43598 195 aa3.68□□□□□ -1.82
SPG4YMR107W MVB12P42939 101 aa3.67□□□□□ -1.82
SPG4YMR107W HOR7Q05827 59 aa3.67□□□□□ -1.82
SPG4YMR107W YKL065W-AQ2V2P2 73 aa3.67□□□□□ -1.82
SPG4YMR107W YOL013W-AP0C272 63 aaPredicted RBP3.66□□□□□ -1.82
SPG4YMR107W TDA2P40045 126 aa3.66□□□□□ -1.82
SPG4YMR107W RPC10P40422 70 aa3.66□□□□□ -1.82
SPG4YMR107W MMS2P53152 137 aa3.66□□□□□ -1.82
SPG4YMR107W YBR230W-AQ3E762 66 aa3.66□□□□□ -1.82
SPG4YMR107W YBR182C-AQ8TGU6 64 aa3.66□□□□□ -1.82
SPG4YMR107W YPR010C-AA5Z2X5 72 aa3.65□□□□□ -1.83
SPG4YMR107W FYV5P25585 152 aa3.65□□□□□ -1.83
SPG4YMR107W PEX22P39718 180 aa3.65□□□□□ -1.83
SPG4YMR107W EDC2P40023 145 aaPredicted RBP3.65□□□□□ -1.83
SPG4YMR107W TMC1Q08422 150 aaPredicted RBP3.65□□□□□ -1.83
SPG4YMR107W URA2P07259 2214 aaKnown RBP3.64□□□□□ -1.83
SPG4YMR107W DIF1O13577 133 aa3.64□□□□□ -1.83
SPG4YMR107W LIP1Q03579 150 aa3.64□□□□□ -1.83
SPG4YMR107W YPR153WQ06537 140 aa3.64□□□□□ -1.83
SPG4YMR107W YHR213W-BQ8TGK1 99 aa3.64□□□□□ -1.83
SPG4YMR107W YGR240C-AQ3E786 66 aa3.62□□□□□ -1.83
SPG4YMR107W YOR376W-AQ3E805 51 aa3.62□□□□□ -1.83
SPG4YMR107W OST5Q92316 86 aa3.62□□□□□ -1.83
SPG4YMR107W YER145C-AA0A023PYF4 145 aa3.6□□□□□ -1.83
SPG4YMR107W HOT13P36078 116 aa3.6□□□□□ -1.83
SPG4YMR107W YDR115WQ04598 105 aa3.6□□□□□ -1.83
SPG4YMR107W ECM19Q06011 112 aa3.6□□□□□ -1.83
SPG4YMR107W COX17Q12287 69 aa3.6□□□□□ -1.83
SPG4YMR107W TSC3Q3E790 80 aa3.6□□□□□ -1.83
SPG4YMR107W YJL133C-AQ3E7A3 74 aa3.6□□□□□ -1.83
SPG4YMR107W YJL197C-AP0C5P0 93 aa3.59□□□□□ -1.83
SPG4YMR107W YDR010CQ12426 110 aa3.59□□□□□ -1.83
SPG4YMR107W YJL127C-BQ3E828 52 aa3.59□□□□□ -1.83
SPG4YMR107W YML100W-AQ8TGT0 57 aa3.59□□□□□ -1.83
SPG4YMR107W YBL039W-BP0C268 59 aa3.58□□□□□ -1.84
SPG4YMR107W YLL066W-BQ8TGJ7 56 aa3.58□□□□□ -1.84
SPG4YMR107W AQY2P0CD90 149 aa3.57□□□□□ -1.84
SPG4YMR107W YCR041WP37265 110 aa3.57□□□□□ -1.84
SPG4YMR107W YGL260WP53056 76 aa3.57□□□□□ -1.84
SPG4YMR107W GIS2P53849 153 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SPG4YMR107W RPL33AP05744 107 aaKnown RBP3.56□□□□□ -1.84
SPG4YMR107W YHR212W-AP0CX91 67 aa3.56□□□□□ -1.84
SPG4YMR107W RPL33BP41056 107 aaKnown RBP3.56□□□□□ -1.84
SPG4YMR107W TEL1P38110 2787 aa3.55□□□□□ -1.84
SPG4YMR107W YAL064WP39711 94 aa3.55□□□□□ -1.84
SPG4YMR107W YCR001WP25347 104 aa3.54□□□□□ -1.84
SPG4YMR107W YBR144CP34215 104 aa3.54□□□□□ -1.84
SPG4YMR107W YHR125WP38831 101 aa3.54□□□□□ -1.84
SPG4YMR107W SPC1P46965 94 aa3.54□□□□□ -1.84
SPG4YMR107W YGL193CP53097 103 aa3.54□□□□□ -1.84
SPG4YMR107W YPL278CQ08990 100 aa3.54□□□□□ -1.84
SPG4YMR107W YNL042W-BQ3E7Z2 85 aa3.54□□□□□ -1.84
SPG4YMR107W Q0297Q9ZZV8 51 aa3.54□□□□□ -1.84
SPG4YMR107W YAR023CD6VPM8 179 aa3.53□□□□□ -1.84
SPG4YMR107W AUA1P32450 94 aa3.53□□□□□ -1.84
SPG4YMR107W YIL156W-BQ2V2P4 73 aa3.53□□□□□ -1.84
SPG4YMR107W YBR126W-AQ8TGU7 68 aa3.53□□□□□ -1.84
SPG4YMR107W YIL102CP40488 101 aa3.51□□□□□ -1.85
SPG4YMR107W YMR001C-AQ8TGS9 76 aa3.5□□□□□ -1.85
SPG4YMR107W YAR064WP39563 99 aa3.48□□□□□ -1.85
SPG4YMR107W YLR157W-DP0CE99 70 aa3.47□□□□□ -1.85
SPG4YMR107W DDR2P89113 61 aa3.47□□□□□ -1.85
SPG4YMR107W YHR007C-AQ07074 71 aa3.47□□□□□ -1.85
SPG4YMR107W YDL012CQ12489 107 aa3.47□□□□□ -1.85
SPG4YMR107W SDH6Q3E785 79 aa3.47□□□□□ -1.85
SPG4YMR107W PRP8P33334 2413 aaKnown RBP3.46□□□□□ -1.85
SPG4YMR107W YGL149WP53116 101 aa3.46□□□□□ -1.86
SPG4YMR107W HUB1Q6Q546 73 aa3.46□□□□□ -1.86
SPG4YMR107W TOR2P32600 2474 aaKnown RBP3.45□□□□□ -1.86
SPG4YMR107W BSC4P53841 131 aa3.44□□□□□ -1.86
SPG4YMR107W YCR095W-AQ3E787 52 aa3.44□□□□□ -1.86
SPG4YMR107W YMR230W-AQ3E7B5 62 aa3.44□□□□□ -1.86
SPG4YMR107W YBR027CP38220 110 aa3.43□□□□□ -1.86
SPG4YMR107W YOR072WQ08486 104 aa3.43□□□□□ -1.86
SPG4YMR107W SPO24Q3E752 67 aa3.43□□□□□ -1.86
SPG4YMR107W UTP20P35194 2493 aaKnown RBP3.42□□□□□ -1.86
SPG4YMR107W ATP17Q06405 101 aa3.41□□□□□ -1.86
SPG4YMR107W LCL2Q08045 131 aa3.41□□□□□ -1.86
SPG4YMR107W DYN1P36022 4092 aa3.4□□□□□ -1.86
SPG4YMR107W YCR043CP25361 127 aa3.4□□□□□ -1.87
SPG4YMR107W YNL122CP53921 115 aaPredicted RBP3.39□□□□□ -1.87
SPG4YMR107W YLR255CO13574 117 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms