RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	COX9	P07255	59 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	ENV10	Q99382	181 aa		0.39	□□□□□ -2.35
CLU1	YMR012W	YCR085W	P25650	117 aa		0.38	□□□□□ -2.35
CLU1	YMR012W	MRX7	P53869	86 aa		0.38	□□□□□ -2.35
CLU1	YMR012W	NAT5	Q08689	176 aa		0.38	□□□□□ -2.35
CLU1	YMR012W	YPL225W	Q08971	146 aa	Known RBP	0.38	□□□□□ -2.35
CLU1	YMR012W	RPL36B	O14455	100 aa	Known RBP	0.38	□□□□□ -2.35
CLU1	YMR012W	RPL36A	P05745	100 aa	Predicted RBP	0.38	□□□□□ -2.35
CLU1	YMR012W	YBR016W	P38216	128 aa		0.38	□□□□□ -2.35
CLU1	YMR012W	YOL118C	Q08259	102 aa		0.38	□□□□□ -2.35
CLU1	YMR012W	YBL071C	P38185	102 aa		0.37	□□□□□ -2.35
CLU1	YMR012W	COA3	Q3E7B2	85 aa		0.37	□□□□□ -2.35
CLU1	YMR012W	YJL009W	P47078	108 aa		0.37	□□□□□ -2.35
CLU1	YMR012W	PAU19	P0CE85	124 aa		0.36	□□□□□ -2.35
CLU1	YMR012W	PAU3	P25610	124 aa		0.36	□□□□□ -2.35
CLU1	YMR012W	MGR2	Q02889	113 aa		0.36	□□□□□ -2.35
CLU1	YMR012W	TOM6	P33448	61 aa		0.36	□□□□□ -2.35
CLU1	YMR012W	PCC1	Q3E833	88 aa		0.36	□□□□□ -2.35
CLU1	YMR012W	PAU5	P43575	122 aa		0.35	□□□□□ -2.35
CLU1	YMR012W	SEN15	Q04675	128 aa		0.35	□□□□□ -2.35
CLU1	YMR012W	AQY2	P0CD90	149 aa		0.35	□□□□□ -2.35
CLU1	YMR012W	EMC6	Q12431	108 aa		0.35	□□□□□ -2.35
CLU1	YMR012W	PAU16	P35994	123 aa		0.35	□□□□□ -2.35
CLU1	YMR012W	PAU15	P40585	124 aa		0.35	□□□□□ -2.35
CLU1	YMR012W	SNA2	P56508	79 aa		0.34	□□□□□ -2.35
CLU1	YMR012W	YOR011W-A	Q3E807	68 aa		0.34	□□□□□ -2.36
CLU1	YMR012W	YER188C-A	P0C0V2	99 aa		0.33	□□□□□ -2.36
CLU1	YMR012W	YDL022C-A	P0C5L6	82 aa		0.33	□□□□□ -2.36
CLU1	YMR012W	DAD1	Q12248	94 aa		0.33	□□□□□ -2.36
CLU1	YMR012W	YNL190W	P53872	204 aa		0.33	□□□□□ -2.36
CLU1	YMR012W	MSL1	P40567	111 aa	Predicted RBP	0.33	□□□□□ -2.36
CLU1	YMR012W	YIL156W-B	Q2V2P4	73 aa		0.33	□□□□□ -2.36
CLU1	YMR012W	RSM18	P40033	138 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	ZEO1	Q08245	113 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	YHR073W-A	P0C5N7	58 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	YJR128W	P47162	119 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	Q0032	Q9ZZX7	96 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	CYB5	P40312	120 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	YOR314W	Q12506	109 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	YPL038W-A	Q3E7B4	63 aa		0.32	□□□□□ -2.36
CLU1	YMR012W	DAD4	P69851	72 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	YPR108W-A	Q3E7B3	70 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	YLR342W-A	Q3E810	57 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	SRB6	P32570	121 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	HSP10	P38910	106 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	SNN1	P48232	102 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	IRC21	Q04772	201 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	YDR381C-A	Q3E6R5	114 aa		0.31	□□□□□ -2.36
CLU1	YMR012W	YKL023C-A	Q2V2P3	75 aa		0.3	□□□□□ -2.36
CLU1	YMR012W	YLR285C-A	Q3E771	56 aa		0.3	□□□□□ -2.36
CLU1	YMR012W	PDX3	P38075	228 aa	Known RBP	0.3	□□□□□ -2.36
CLU1	YMR012W	YBL039W-B	P0C268	59 aa		0.3	□□□□□ -2.36
CLU1	YMR012W	YOL131W	Q08270	108 aa		0.3	□□□□□ -2.36
CLU1	YMR012W	VMA21	P41806	77 aa		0.29	□□□□□ -2.36
CLU1	YMR012W	MIC27	P50945	234 aa		0.29	□□□□□ -2.36
CLU1	YMR012W	SWM2	P40342	146 aa		0.29	□□□□□ -2.36
CLU1	YMR012W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.29	□□□□□ -2.36
CLU1	YMR012W	COA6	Q3E846	104 aa		0.29	□□□□□ -2.36
CLU1	YMR012W	HMRA2	P0CY13	119 aa		0.28	□□□□□ -2.36
CLU1	YMR012W	YLR363W-A	Q3E747	85 aa		0.28	□□□□□ -2.36
CLU1	YMR012W	YOR072W	Q08486	104 aa		0.28	□□□□□ -2.36
CLU1	YMR012W	YHR213W-A	Q8TGT4	77 aa		0.28	□□□□□ -2.36
CLU1	YMR012W	RPS22A	P0C0W1	130 aa	Known RBP	0.28	□□□□□ -2.37
CLU1	YMR012W	YHR173C	P38864	112 aa		0.28	□□□□□ -2.37
CLU1	YMR012W	TDA2	P40045	126 aa		0.28	□□□□□ -2.37
CLU1	YMR012W	NHP2	P32495	156 aa	Predicted RBP	0.27	□□□□□ -2.37
CLU1	YMR012W	YFL065C	P43539	102 aa		0.27	□□□□□ -2.37
CLU1	YMR012W	YPR203W	Q08994	102 aa		0.27	□□□□□ -2.37
CLU1	YMR012W	YOL166W-A	Q8TGJ1	51 aa		0.27	□□□□□ -2.37
CLU1	YMR012W	YOR192C-C	Q3E736	78 aa		0.26	□□□□□ -2.37
CLU1	YMR012W	YOL097W-A	Q3E7Y9	61 aa		0.26	□□□□□ -2.37
CLU1	YMR012W	YNR034W-A	Q3E841	98 aa		0.26	□□□□□ -2.37
CLU1	YMR012W	YBR292C	P38357	123 aa		0.26	□□□□□ -2.37
CLU1	YMR012W	CWP2	P43497	92 aa		0.26	□□□□□ -2.37
CLU1	YMR012W	LSM6	Q06406	86 aa	Known RBP	0.26	□□□□□ -2.37
CLU1	YMR012W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.26	□□□□□ -2.37
CLU1	YMR012W	YLR157W-D	P0CE99	70 aa		0.26	□□□□□ -2.37
CLU1	YMR012W	YNL198C	P40166	100 aa		0.25	□□□□□ -2.37
CLU1	YMR012W	BSC4	P53841	131 aa		0.25	□□□□□ -2.37
CLU1	YMR012W	YBR200W-A	Q3E755	54 aa		0.25	□□□□□ -2.37
CLU1	YMR012W	RPL29	P05747	59 aa	Predicted RBP	0.25	□□□□□ -2.37
CLU1	YMR012W	ATG8	P38182	117 aa	RIP-Chip data	0.25	□□□□□ -2.37	not detected
CLU1	YMR012W	YOR034C-A	Q3E735	80 aa		0.25	□□□□□ -2.37
CLU1	YMR012W	GCV3	P39726	170 aa	Predicted RBP	0.25	□□□□□ -2.37
CLU1	YMR012W	YKL065W-A	Q2V2P2	73 aa		0.25	□□□□□ -2.37
CLU1	YMR012W	MRPL31	P14063	131 aa	Predicted RBP	0.24	□□□□□ -2.37
CLU1	YMR012W	YCR095W-A	Q3E787	52 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	NOP10	Q6Q547	58 aa	Predicted RBP	0.24	□□□□□ -2.37
CLU1	YMR012W	HUG1	Q6Q5K6	68 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	YKL018C-A	Q3E7A7	99 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	PAU6	P0CE90	120 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	PAU18	P0CE91	120 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	YGL010W	P25338	174 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	MRP17	P28778	131 aa		0.24	□□□□□ -2.37
CLU1	YMR012W	YFL041W-A	Q3E817	63 aa		0.23	□□□□□ -2.37
CLU1	YMR012W	YIL102C	P40488	101 aa		0.23	□□□□□ -2.37
CLU1	YMR012W	YNL042W-B	Q3E7Z2	85 aa		0.23	□□□□□ -2.37
CLU1	YMR012W	YMR007W	Q03675	126 aa		0.22	□□□□□ -2.37
CLU1	YMR012W	SHU1	P38751	150 aa		0.22	□□□□□ -2.37
CLU1	YMR012W	DDR2	P89113	61 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms