RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W YJR085CP47131 105 aaKnown RBP9.8□□□□□ -0.84
CCC1YLR220W YHR007C-AQ07074 71 aa9.8□□□□□ -0.84
CCC1YLR220W YJR107C-AP0CT86 78 aa9.78□□□□□ -0.84
CCC1YLR220W YOR268CQ08734 132 aa9.78□□□□□ -0.84
CCC1YLR220W YGL149WP53116 101 aa9.77□□□□□ -0.85
CCC1YLR220W YOR072WQ08486 104 aa9.77□□□□□ -0.85
CCC1YLR220W RPL36BO14455 100 aaKnown RBP9.75□□□□□ -0.85
CCC1YLR220W TMA7Q3E764 64 aaKnown RBP9.75□□□□□ -0.85
CCC1YLR220W DSE2P38844 325 aa9.73□□□□□ -0.85
CCC1YLR220W OST2P46964 130 aa9.73□□□□□ -0.85
CCC1YLR220W KRE1P17260 313 aa9.71□□□□□ -0.86
CCC1YLR220W YDR010CQ12426 110 aa9.69□□□□□ -0.86
CCC1YLR220W TSC3Q3E790 80 aa9.68□□□□□ -0.86
CCC1YLR220W ATP18P81450 59 aa9.66□□□□□ -0.86
CCC1YLR220W YMR230W-AQ3E7B5 62 aa9.66□□□□□ -0.86
CCC1YLR220W YHR139C-AO13536 103 aa9.65□□□□□ -0.86
CCC1YLR220W YFR009W-AP0C5M9 85 aa9.64□□□□□ -0.87
CCC1YLR220W TDA8Q6B2U8 126 aa9.62□□□□□ -0.87
CCC1YLR220W YBR027CP38220 110 aa9.61□□□□□ -0.87
CCC1YLR220W RSM18P40033 138 aa9.61□□□□□ -0.87
CCC1YLR220W YAR1P46683 200 aa9.61□□□□□ -0.87
CCC1YLR220W RPA12P32529 125 aaKnown RBP9.58□□□□□ -0.88
CCC1YLR220W YNL184CP53876 108 aa9.58□□□□□ -0.88
CCC1YLR220W YJL197C-AP0C5P0 93 aa9.53□□□□□ -0.88
CCC1YLR220W RSM19P53733 91 aaPredicted RBP9.53□□□□□ -0.88
CCC1YLR220W YDR381C-AQ3E6R5 114 aa9.53□□□□□ -0.88
CCC1YLR220W PBI2P0CT04 75 aaKnown RBP9.51□□□□□ -0.89
CCC1YLR220W YHR213W-BQ8TGK1 99 aa9.51□□□□□ -0.89
CCC1YLR220W ICS3P47034 131 aa9.5□□□□□ -0.89
CCC1YLR220W KSH1Q8TGJ3 72 aa9.5□□□□□ -0.89
CCC1YLR220W KTI11Q3E840 82 aa9.49□□□□□ -0.89
CCC1YLR220W SHH4Q06236 168 aa9.47□□□□□ -0.89
CCC1YLR220W YCR085WP25650 117 aa9.46□□□□□ -0.9
CCC1YLR220W HOT13P36078 116 aa9.44□□□□□ -0.9
CCC1YLR220W YLR162WQ06235 118 aa9.44□□□□□ -0.9
CCC1YLR220W YJL133C-AQ3E7A3 74 aa9.44□□□□□ -0.9
CCC1YLR220W COX23P38824 151 aa9.42□□□□□ -0.9
CCC1YLR220W ECM19Q06011 112 aa9.42□□□□□ -0.9
CCC1YLR220W ISD11Q6Q560 94 aa9.4□□□□□ -0.9
CCC1YLR220W MIC10Q96VH5 97 aa9.4□□□□□ -0.9
CCC1YLR220W EDC1P53080 175 aaPredicted RBP9.39□□□□□ -0.91
CCC1YLR220W YEL045CP32616 141 aa9.38□□□□□ -0.91
CCC1YLR220W ATX1P38636 73 aa9.38□□□□□ -0.91
CCC1YLR220W YOL097W-AQ3E7Y9 61 aa9.36□□□□□ -0.91
CCC1YLR220W SKI6P46948 246 aaPredicted RBP9.34□□□□□ -0.91
CCC1YLR220W YLR157W-DP0CE99 70 aa9.33□□□□□ -0.92
CCC1YLR220W YOL014WQ08110 124 aa9.32□□□□□ -0.92
CCC1YLR220W TDA2P40045 126 aa9.3□□□□□ -0.92
CCC1YLR220W RPL38P49167 78 aaKnown RBP9.29□□□□□ -0.92
CCC1YLR220W RAD6P06104 172 aa9.27□□□□□ -0.93
CCC1YLR220W INO4P13902 151 aa9.27□□□□□ -0.93
CCC1YLR220W YHL005CP38752 130 aa9.27□□□□□ -0.93
CCC1YLR220W YHL018WP38744 120 aaPredicted RBP9.25□□□□□ -0.93
CCC1YLR220W YBR182C-AQ8TGU6 64 aa9.23□□□□□ -0.93
CCC1YLR220W YAL063C-AQ3E791 96 aa9.22□□□□□ -0.93
CCC1YLR220W YCR050CP25630 102 aa9.2□□□□□ -0.94
CCC1YLR220W YHL042WP38729 150 aa9.2□□□□□ -0.94
CCC1YLR220W COF1Q03048 143 aaKnown RBP9.19□□□□□ -0.94
CCC1YLR220W ATP20Q12233 115 aa9.19□□□□□ -0.94
CCC1YLR220W CMC4Q3E7A9 73 aa9.18□□□□□ -0.94
CCC1YLR220W EMC6Q12431 108 aa9.16□□□□□ -0.94
CCC1YLR220W YCR043CP25361 127 aa9.14□□□□□ -0.95
CCC1YLR220W SLO1Q3E784 85 aa9.14□□□□□ -0.95
CCC1YLR220W YFL041W-AQ3E817 63 aa9.1□□□□□ -0.95
CCC1YLR220W RPP2AP05319 106 aaKnown RBP9.08□□□□□ -0.96
CCC1YLR220W YLR285C-AQ3E771 56 aa9.08□□□□□ -0.96
CCC1YLR220W YOR304C-AO14468 76 aa9.07□□□□□ -0.96
CCC1YLR220W COX7P10174 60 aa9.07□□□□□ -0.96
CCC1YLR220W YSY6P38374 65 aa9.05□□□□□ -0.96
CCC1YLR220W YNL122CP53921 115 aaPredicted RBP9.03□□□□□ -0.96
CCC1YLR220W RPL36AP05745 100 aaPredicted RBP9.02□□□□□ -0.97
CCC1YLR220W YAR064WP39563 99 aa9.01□□□□□ -0.97
CCC1YLR220W YHR073W-AP0C5N7 58 aa8.98□□□□□ -0.97
CCC1YLR220W YFL065CP43539 102 aa8.97□□□□□ -0.97
CCC1YLR220W YPR203WQ08994 102 aa8.97□□□□□ -0.97
CCC1YLR220W YDL012CQ12489 107 aa8.97□□□□□ -0.97
CCC1YLR220W YKL069WP36088 180 aa8.96□□□□□ -0.98
CCC1YLR220W YKL183C-AQ3E765 70 aa8.92□□□□□ -0.98
CCC1YLR220W RUB1Q03919 77 aa8.88□□□□□ -0.99
CCC1YLR220W YPL080CQ02826 108 aa8.87□□□□□ -0.99
CCC1YLR220W SOH1P38633 127 aa8.86□□□□□ -0.99
CCC1YLR220W YLR361C-AQ3E795 98 aa8.85□□□□□ -0.99
CCC1YLR220W YER187WP40102 141 aa8.81□□□□□ -1
CCC1YLR220W RPL37BP51402 88 aaKnown RBP8.81□□□□□ -1
CCC1YLR220W YPR153WQ06537 140 aa8.81□□□□□ -1
CCC1YLR220W YGR164WP53291 111 aa8.8□□□□□ -1
CCC1YLR220W YOR314WQ12506 109 aa8.74□□□□□ -1.01
CCC1YLR220W YOR316C-AQ3E806 69 aa8.74□□□□□ -1.01
CCC1YLR220W YOL013W-AP0C272 63 aaPredicted RBP8.73□□□□□ -1.01
CCC1YLR220W YDR119W-AQ2V2P9 66 aa8.71□□□□□ -1.02
CCC1YLR220W NOP10Q6Q547 58 aaPredicted RBP8.69□□□□□ -1.02
CCC1YLR220W YGR039WP53225 103 aa8.68□□□□□ -1.02
CCC1YLR220W YPL038W-AQ3E7B4 63 aa8.67□□□□□ -1.02
CCC1YLR220W LIP1Q03579 150 aa8.65□□□□□ -1.02
CCC1YLR220W YDR246W-AQ3E763 66 aa8.62□□□□□ -1.03
CCC1YLR220W YJR128WP47162 119 aa8.6□□□□□ -1.03
CCC1YLR220W YIL102CP40488 101 aa8.58□□□□□ -1.04
CCC1YLR220W HHF1P02309 103 aaKnown RBP8.54□□□□□ -1.04
CCC1YLR220W YOL166W-AQ8TGJ1 51 aa8.53□□□□□ -1.04
CCC1YLR220W YJL144WP47009 104 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms