RNA–Protein interactions for RNA: YLR146C

SPE4, Transcript of Spermine synthase, yeastyeast

Gene SPE4, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE4YLR146C DIF1O13577 133 aa5.45□□□□□ -1.54
SPE4YLR146C COX23P38824 151 aa5.45□□□□□ -1.54
SPE4YLR146C RPS11AP0CX47 156 aaKnown RBP5.44□□□□□ -1.54
SPE4YLR146C RPS11BP0CX48 156 aaKnown RBP5.44□□□□□ -1.54
SPE4YLR146C YBR144CP34215 104 aa5.43□□□□□ -1.54
SPE4YLR146C HOR7Q05827 59 aa5.43□□□□□ -1.54
SPE4YLR146C SPO24Q3E752 67 aa5.43□□□□□ -1.54
SPE4YLR146C RPS30AP0CX33 63 aaKnown RBP5.42□□□□□ -1.54
SPE4YLR146C RPS30BP0CX34 63 aaKnown RBP5.42□□□□□ -1.54
SPE4YLR146C RPB9P27999 122 aa5.42□□□□□ -1.54
SPE4YLR146C YMR122CQ03879 124 aa5.42□□□□□ -1.54
SPE4YLR146C EDC2P40023 145 aaPredicted RBP5.41□□□□□ -1.54
SPE4YLR146C MVB12P42939 101 aa5.41□□□□□ -1.54
SPE4YLR146C OST5Q92316 86 aa5.41□□□□□ -1.54
SPE4YLR146C YER188C-AP0C0V2 99 aa5.4□□□□□ -1.54
SPE4YLR146C SMD1Q02260 146 aaPredicted RBP5.4□□□□□ -1.54
SPE4YLR146C YOL014WQ08110 124 aa5.4□□□□□ -1.54
SPE4YLR146C YNL162W-AQ3E7A8 72 aa5.4□□□□□ -1.54
SPE4YLR146C YDR034W-BQ6Q5X2 51 aa5.4□□□□□ -1.54
SPE4YLR146C FYV5P25585 152 aa5.39□□□□□ -1.55
SPE4YLR146C YPR010C-AA5Z2X5 72 aa5.38□□□□□ -1.55
SPE4YLR146C HOT13P36078 116 aa5.37□□□□□ -1.55
SPE4YLR146C LIP1Q03579 150 aa5.37□□□□□ -1.55
SPE4YLR146C YGR240C-AQ3E786 66 aa5.37□□□□□ -1.55
SPE4YLR146C YHR213W-BQ8TGK1 99 aa5.37□□□□□ -1.55
SPE4YLR146C TAR1Q8TGM6 124 aa5.37□□□□□ -1.55
SPE4YLR146C YBL039W-BP0C268 59 aa5.36□□□□□ -1.55
SPE4YLR146C IRA2P19158 3079 aa5.36□□□□□ -1.55
SPE4YLR146C RPC10P40422 70 aa5.35□□□□□ -1.55
SPE4YLR146C RDS3Q06835 107 aaPredicted RBP5.35□□□□□ -1.55
SPE4YLR146C YBR230W-AQ3E762 66 aa5.35□□□□□ -1.55
SPE4YLR146C AQY2P0CD90 149 aa5.33□□□□□ -1.56
SPE4YLR146C YIL102CP40488 101 aa5.33□□□□□ -1.56
SPE4YLR146C SPC1P46965 94 aa5.33□□□□□ -1.56
SPE4YLR146C YPR153WQ06537 140 aa5.33□□□□□ -1.56
SPE4YLR146C YJL127C-BQ3E828 52 aa5.33□□□□□ -1.56
SPE4YLR146C CSF1Q12150 2958 aa5.33□□□□□ -1.56
SPE4YLR146C YJL133C-AQ3E7A3 74 aa5.32□□□□□ -1.56
SPE4YLR146C HUB1Q6Q546 73 aa5.32□□□□□ -1.56
SPE4YLR146C YOL013W-AP0C272 63 aaPredicted RBP5.3□□□□□ -1.56
SPE4YLR146C YML100W-AQ8TGT0 57 aa5.3□□□□□ -1.56
SPE4YLR146C YEL045CP32616 141 aa5.29□□□□□ -1.56
SPE4YLR146C YLR307C-AQ3E825 87 aa5.29□□□□□ -1.56
SPE4YLR146C YAR023CD6VPM8 179 aa5.28□□□□□ -1.56
SPE4YLR146C ECM19Q06011 112 aa5.28□□□□□ -1.56
SPE4YLR146C YNL042W-BQ3E7Z2 85 aa5.27□□□□□ -1.57
SPE4YLR146C YOR376W-AQ3E805 51 aa5.27□□□□□ -1.57
SPE4YLR146C YBL081WP38180 368 aaKnown RBP5.26□□□□□ -1.57
SPE4YLR146C TMC1Q08422 150 aaPredicted RBP5.26□□□□□ -1.57
SPE4YLR146C IGD1P43598 195 aa5.25□□□□□ -1.57
SPE4YLR146C URA2P07259 2214 aaKnown RBP5.25□□□□□ -1.57
SPE4YLR146C SDH6Q3E785 79 aa5.24□□□□□ -1.57
SPE4YLR146C YAL064WP39711 94 aa5.23□□□□□ -1.57
SPE4YLR146C SPG1P50088 95 aa5.23□□□□□ -1.57
SPE4YLR146C YGL034CP53186 121 aa5.22□□□□□ -1.57
SPE4YLR146C YCR095W-AQ3E787 52 aa5.22□□□□□ -1.57
SPE4YLR146C RPL33AP05744 107 aaKnown RBP5.21□□□□□ -1.58
SPE4YLR146C YHR125WP38831 101 aa5.21□□□□□ -1.58
SPE4YLR146C RPL33BP41056 107 aaKnown RBP5.21□□□□□ -1.58
SPE4YLR146C YGL260WP53056 76 aa5.21□□□□□ -1.58
SPE4YLR146C YGL193CP53097 103 aa5.21□□□□□ -1.58
SPE4YLR146C YER145C-AA0A023PYF4 145 aa5.2□□□□□ -1.58
SPE4YLR146C YLR157W-DP0CE99 70 aa5.2□□□□□ -1.58
SPE4YLR146C YMR001C-AQ8TGS9 76 aa5.2□□□□□ -1.58
SPE4YLR146C YCR001WP25347 104 aa5.19□□□□□ -1.58
SPE4YLR146C FMP27Q06179 2628 aa5.19□□□□□ -1.58
SPE4YLR146C DDR2P89113 61 aa5.18□□□□□ -1.58
SPE4YLR146C YPL278CQ08990 100 aa5.17□□□□□ -1.58
SPE4YLR146C YCR041WP37265 110 aa5.16□□□□□ -1.58
SPE4YLR146C YAR064WP39563 99 aa5.16□□□□□ -1.58
SPE4YLR146C YDR010CQ12426 110 aa5.16□□□□□ -1.58
SPE4YLR146C YHR212W-AP0CX91 67 aa5.15□□□□□ -1.59
SPE4YLR146C Q0032Q9ZZX7 96 aa5.15□□□□□ -1.59
SPE4YLR146C YDR115WQ04598 105 aa5.14□□□□□ -1.59
SPE4YLR146C AUA1P32450 94 aa5.13□□□□□ -1.59
SPE4YLR146C YOR072WQ08486 104 aa5.13□□□□□ -1.59
SPE4YLR146C YBR027CP38220 110 aa5.12□□□□□ -1.59
SPE4YLR146C ATP17Q06405 101 aa5.12□□□□□ -1.59
SPE4YLR146C YIL156W-BQ2V2P4 73 aa5.12□□□□□ -1.59
SPE4YLR146C YGL149WP53116 101 aa5.11□□□□□ -1.59
SPE4YLR146C YHR007C-AQ07074 71 aa5.11□□□□□ -1.59
SPE4YLR146C YCR043CP25361 127 aa5.1□□□□□ -1.59
SPE4YLR146C BSC4P53841 131 aa5.1□□□□□ -1.59
SPE4YLR146C SGF11Q03067 99 aa5.1□□□□□ -1.59
SPE4YLR146C YJL197C-AP0C5P0 93 aa5.09□□□□□ -1.59
SPE4YLR146C Q0297Q9ZZV8 51 aa5.09□□□□□ -1.59
SPE4YLR146C YGL041C-BQ3E750 60 aa5.08□□□□□ -1.6
SPE4YLR146C YLL066W-BQ8TGJ7 56 aa5.06□□□□□ -1.6
SPE4YLR146C GIS2P53849 153 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
SPE4YLR146C RTC6O14464 93 aa5.04□□□□□ -1.6
SPE4YLR146C MRX7P53869 86 aa5.04□□□□□ -1.6
SPE4YLR146C IRA1P18963 3092 aa5.04□□□□□ -1.6
SPE4YLR146C SNA2P56508 79 aa5.02□□□□□ -1.61
SPE4YLR146C YFR032C-BQ8TGU2 87 aa5.02□□□□□ -1.61
SPE4YLR146C DDR48P18899 430 aaKnown RBP5.01□□□□□ -1.61
SPE4YLR146C TRA1P38811 3744 aa4.99□□□□□ -1.61
SPE4YLR146C YNL122CP53921 115 aaPredicted RBP4.98□□□□□ -1.61
SPE4YLR146C LCL2Q08045 131 aa4.98□□□□□ -1.61
SPE4YLR146C YDL012CQ12489 107 aa4.98□□□□□ -1.61
SPE4YLR146C QCR10P37299 77 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms