RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YHR007C-AQ07074 71 aa6.67□□□□□ -1.34
SHM2YLR058C YGR121W-AQ3E816 71 aa6.67□□□□□ -1.34
SHM2YLR058C SPG1P50088 95 aa6.65□□□□□ -1.35
SHM2YLR058C YOR072WQ08486 104 aa6.65□□□□□ -1.35
SHM2YLR058C RPL36BO14455 100 aaKnown RBP6.63□□□□□ -1.35
SHM2YLR058C RPA12P32529 125 aaKnown RBP6.63□□□□□ -1.35
SHM2YLR058C YFL067WP43537 175 aa6.63□□□□□ -1.35
SHM2YLR058C YGL149WP53116 101 aa6.62□□□□□ -1.35
SHM2YLR058C TSC3Q3E790 80 aa6.62□□□□□ -1.35
SHM2YLR058C OST2P46964 130 aa6.61□□□□□ -1.35
SHM2YLR058C YJR085CP47131 105 aaKnown RBP6.61□□□□□ -1.35
SHM2YLR058C ATP18P81450 59 aa6.61□□□□□ -1.35
SHM2YLR058C YOR268CQ08734 132 aa6.6□□□□□ -1.35
SHM2YLR058C YMR230W-AQ3E7B5 62 aa6.6□□□□□ -1.35
SHM2YLR058C YHR139C-AO13536 103 aa6.59□□□□□ -1.35
SHM2YLR058C YFR009W-AP0C5M9 85 aa6.59□□□□□ -1.35
SHM2YLR058C PBI2P0CT04 75 aaKnown RBP6.56□□□□□ -1.36
SHM2YLR058C KRE1P17260 313 aa6.56□□□□□ -1.36
SHM2YLR058C YAR1P46683 200 aa6.56□□□□□ -1.36
SHM2YLR058C YBR027CP38220 110 aa6.53□□□□□ -1.36
SHM2YLR058C RSM18P40033 138 aa6.53□□□□□ -1.36
SHM2YLR058C YDR381C-AQ3E6R5 114 aa6.52□□□□□ -1.37
SHM2YLR058C TDA8Q6B2U8 126 aa6.52□□□□□ -1.37
SHM2YLR058C SOH1P38633 127 aa6.51□□□□□ -1.37
SHM2YLR058C YNL184CP53876 108 aa6.51□□□□□ -1.37
SHM2YLR058C YDR010CQ12426 110 aa6.51□□□□□ -1.37
SHM2YLR058C ATX1P38636 73 aa6.5□□□□□ -1.37
SHM2YLR058C YCR085WP25650 117 aa6.5□□□□□ -1.37
SHM2YLR058C ICS3P47034 131 aa6.5□□□□□ -1.37
SHM2YLR058C YHR213W-BQ8TGK1 99 aa6.5□□□□□ -1.37
SHM2YLR058C RSM19P53733 91 aaPredicted RBP6.48□□□□□ -1.37
SHM2YLR058C EDC1P53080 175 aaPredicted RBP6.47□□□□□ -1.37
SHM2YLR058C SHH4Q06236 168 aa6.46□□□□□ -1.38
SHM2YLR058C YJL133C-AQ3E7A3 74 aa6.46□□□□□ -1.38
SHM2YLR058C YJL197C-AP0C5P0 93 aa6.45□□□□□ -1.38
SHM2YLR058C INO4P13902 151 aa6.45□□□□□ -1.38
SHM2YLR058C COX23P38824 151 aa6.43□□□□□ -1.38
SHM2YLR058C SKI6P46948 246 aaPredicted RBP6.43□□□□□ -1.38
SHM2YLR058C ECM19Q06011 112 aa6.42□□□□□ -1.38
SHM2YLR058C YLR162WQ06235 118 aa6.42□□□□□ -1.38
SHM2YLR058C RPL38P49167 78 aaKnown RBP6.42□□□□□ -1.38
SHM2YLR058C KTI11Q3E840 82 aa6.42□□□□□ -1.38
SHM2YLR058C MIC10Q96VH5 97 aa6.41□□□□□ -1.38
SHM2YLR058C RAD6P06104 172 aa6.4□□□□□ -1.39
SHM2YLR058C TDA2P40045 126 aa6.4□□□□□ -1.39
SHM2YLR058C YOL014WQ08110 124 aa6.4□□□□□ -1.39
SHM2YLR058C ISD11Q6Q560 94 aa6.4□□□□□ -1.39
SHM2YLR058C KSH1Q8TGJ3 72 aa6.4□□□□□ -1.39
SHM2YLR058C SLO1Q3E784 85 aa6.39□□□□□ -1.39
SHM2YLR058C YEL045CP32616 141 aa6.38□□□□□ -1.39
SHM2YLR058C HOT13P36078 116 aa6.37□□□□□ -1.39
SHM2YLR058C YAL063C-AQ3E791 96 aa6.37□□□□□ -1.39
SHM2YLR058C YLR157W-DP0CE99 70 aa6.34□□□□□ -1.39
SHM2YLR058C YOL097W-AQ3E7Y9 61 aa6.34□□□□□ -1.39
SHM2YLR058C COF1Q03048 143 aaKnown RBP6.33□□□□□ -1.4
SHM2YLR058C EMC6Q12431 108 aa6.33□□□□□ -1.4
SHM2YLR058C RPP2AP05319 106 aaKnown RBP6.32□□□□□ -1.4
SHM2YLR058C YHL042WP38729 150 aa6.31□□□□□ -1.4
SHM2YLR058C ATP20Q12233 115 aa6.31□□□□□ -1.4
SHM2YLR058C YFL041W-AQ3E817 63 aa6.28□□□□□ -1.4
SHM2YLR058C YBR182C-AQ8TGU6 64 aa6.28□□□□□ -1.4
SHM2YLR058C YHL005CP38752 130 aa6.27□□□□□ -1.41
SHM2YLR058C RUB1Q03919 77 aa6.26□□□□□ -1.41
SHM2YLR058C YLR285C-AQ3E771 56 aa6.26□□□□□ -1.41
SHM2YLR058C YCR043CP25361 127 aa6.25□□□□□ -1.41
SHM2YLR058C YCR050CP25630 102 aa6.25□□□□□ -1.41
SHM2YLR058C YHL018WP38744 120 aaPredicted RBP6.25□□□□□ -1.41
SHM2YLR058C YFL065CP43539 102 aa6.25□□□□□ -1.41
SHM2YLR058C YPR203WQ08994 102 aa6.25□□□□□ -1.41
SHM2YLR058C YSY6P38374 65 aa6.23□□□□□ -1.41
SHM2YLR058C YOR304C-AO14468 76 aa6.21□□□□□ -1.42
SHM2YLR058C YAR064WP39563 99 aa6.16□□□□□ -1.42
SHM2YLR058C RPL36AP05745 100 aaPredicted RBP6.15□□□□□ -1.43
SHM2YLR058C COX7P10174 60 aa6.13□□□□□ -1.43
SHM2YLR058C CMC4Q3E7A9 73 aa6.13□□□□□ -1.43
SHM2YLR058C YDL012CQ12489 107 aa6.12□□□□□ -1.43
SHM2YLR058C YKL183C-AQ3E765 70 aa6.12□□□□□ -1.43
SHM2YLR058C YPL080CQ02826 108 aa6.1□□□□□ -1.43
SHM2YLR058C YHR073W-AP0C5N7 58 aa6.08□□□□□ -1.44
SHM2YLR058C YKL069WP36088 180 aa6.08□□□□□ -1.44
SHM2YLR058C YNL122CP53921 115 aaPredicted RBP6.08□□□□□ -1.44
SHM2YLR058C YLR361C-AQ3E795 98 aa6.07□□□□□ -1.44
SHM2YLR058C YER187WP40102 141 aa6.04□□□□□ -1.44
SHM2YLR058C YGR039WP53225 103 aa6.04□□□□□ -1.44
SHM2YLR058C YPR153WQ06537 140 aa6.03□□□□□ -1.44
SHM2YLR058C YDR119W-AQ2V2P9 66 aa6.03□□□□□ -1.44
SHM2YLR058C YOR314WQ12506 109 aa6.02□□□□□ -1.45
SHM2YLR058C NOP10Q6Q547 58 aaPredicted RBP5.99□□□□□ -1.45
SHM2YLR058C YPL038W-AQ3E7B4 63 aa5.99□□□□□ -1.45
SHM2YLR058C YOL013W-AP0C272 63 aaPredicted RBP5.98□□□□□ -1.45
SHM2YLR058C YIL102CP40488 101 aa5.96□□□□□ -1.46
SHM2YLR058C YOR316C-AQ3E806 69 aa5.96□□□□□ -1.46
SHM2YLR058C LIP1Q03579 150 aa5.95□□□□□ -1.46
SHM2YLR058C YDR246W-AQ3E763 66 aa5.94□□□□□ -1.46
SHM2YLR058C YGR164WP53291 111 aa5.93□□□□□ -1.46
SHM2YLR058C RPL37BP51402 88 aaKnown RBP5.91□□□□□ -1.46
SHM2YLR058C YJR128WP47162 119 aa5.89□□□□□ -1.47
SHM2YLR058C HHF1P02309 103 aaKnown RBP5.88□□□□□ -1.47
SHM2YLR058C YOL166W-AQ8TGJ1 51 aa5.87□□□□□ -1.47
SHM2YLR058C AIM4P38305 123 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms