RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YNL042W-BQ3E7Z2 85 aa1.4□□□□□ -2.19
SED5YLR026C YBR027CP38220 110 aa1.39□□□□□ -2.19
SED5YLR026C HSP10P38910 106 aa1.38□□□□□ -2.19
SED5YLR026C PHS1P40857 217 aa1.38□□□□□ -2.19
SED5YLR026C RPS29BP41058 56 aaKnown RBP1.38□□□□□ -2.19
SED5YLR026C YNL190WP53872 204 aa1.38□□□□□ -2.19
SED5YLR026C YIL014C-AQ02598 104 aa1.38□□□□□ -2.19
SED5YLR026C YLL006W-AQ3E814 58 aa1.38□□□□□ -2.19
SED5YLR026C Q0017Q9ZZX8 53 aa1.38□□□□□ -2.19
SED5YLR026C SNN1P48232 102 aa1.37□□□□□ -2.19
SED5YLR026C YOR072WQ08486 104 aa1.37□□□□□ -2.19
SED5YLR026C YJL127C-BQ3E828 52 aa1.37□□□□□ -2.19
SED5YLR026C RPL29P05747 59 aaPredicted RBP1.36□□□□□ -2.19
SED5YLR026C INO4P13902 151 aa1.35□□□□□ -2.19
SED5YLR026C MRPL11P36521 249 aaPredicted RBP1.35□□□□□ -2.19
SED5YLR026C AIM11P87275 137 aa1.35□□□□□ -2.19
SED5YLR026C YBR230W-AQ3E762 66 aa1.35□□□□□ -2.19
SED5YLR026C RPS22BQ3E7Y3 130 aaKnown RBP1.35□□□□□ -2.19
SED5YLR026C HPA2Q06592 156 aa1.34□□□□□ -2.19
SED5YLR026C VMA9Q3E7B6 73 aa1.34□□□□□ -2.19
SED5YLR026C ATP5P09457 212 aa1.33□□□□□ -2.2
SED5YLR026C YLR157W-DP0CE99 70 aa1.33□□□□□ -2.2
SED5YLR026C NHP6AP11632 93 aaKnown RBP1.33□□□□□ -2.2
SED5YLR026C YDR210WQ03482 75 aa1.33□□□□□ -2.2
SED5YLR026C RPL36BO14455 100 aaKnown RBP1.32□□□□□ -2.2
SED5YLR026C FYV5P25585 152 aa1.32□□□□□ -2.2
SED5YLR026C GLC8P41818 229 aa1.32□□□□□ -2.2
SED5YLR026C RPL37AP49166 88 aaKnown RBP1.32□□□□□ -2.2
SED5YLR026C YGL230CP53074 147 aa1.32□□□□□ -2.2
SED5YLR026C YMR103CQ04436 120 aa1.32□□□□□ -2.2
SED5YLR026C PAU17Q12370 124 aa1.32□□□□□ -2.2
SED5YLR026C RAD6P06104 172 aa1.31□□□□□ -2.2
SED5YLR026C SRB6P32570 121 aa1.31□□□□□ -2.2
SED5YLR026C GSP1P32835 219 aaKnown RBP1.31□□□□□ -2.2
SED5YLR026C YPL261CQ08976 102 aa1.31□□□□□ -2.2
SED5YLR026C YJL009WP47078 108 aa1.3□□□□□ -2.2
SED5YLR026C YJR128WP47162 119 aa1.29□□□□□ -2.2
SED5YLR026C LIP1Q03579 150 aa1.29□□□□□ -2.2
SED5YLR026C ICY1Q04329 127 aa1.29□□□□□ -2.2
SED5YLR026C IRC21Q04772 201 aa1.29□□□□□ -2.2
SED5YLR026C MRPS12P53732 153 aa1.28□□□□□ -2.2
SED5YLR026C FYV7Q12247 151 aa1.28□□□□□ -2.2
SED5YLR026C FUN14P18411 198 aa1.27□□□□□ -2.21
SED5YLR026C VMA21P41806 77 aa1.27□□□□□ -2.21
SED5YLR026C COF1Q03048 143 aaKnown RBP1.27□□□□□ -2.21
SED5YLR026C YOL097W-AQ3E7Y9 61 aa1.27□□□□□ -2.21
SED5YLR026C SCS22Q6Q595 175 aa1.27□□□□□ -2.21
SED5YLR026C YDL022C-AP0C5L6 82 aa1.26□□□□□ -2.21
SED5YLR026C YER187WP40102 141 aa1.26□□□□□ -2.21
SED5YLR026C SFT1P43682 97 aa1.26□□□□□ -2.21
SED5YLR026C PAU23Q07987 124 aa1.26□□□□□ -2.21
SED5YLR026C YDL157CQ12082 118 aa1.26□□□□□ -2.21
SED5YLR026C ATP14Q12349 124 aa1.26□□□□□ -2.21
SED5YLR026C YER188C-AP0C0V2 99 aa1.25□□□□□ -2.21
SED5YLR026C HHO1P53551 258 aa1.25□□□□□ -2.21
SED5YLR026C YOR034C-AQ3E735 80 aa1.25□□□□□ -2.21
SED5YLR026C ATG8P38182 117 aaRIP-Chip data1.24□□□□□ -2.21not detected
SED5YLR026C RSM18P40033 138 aa1.24□□□□□ -2.21
SED5YLR026C YER181CP40097 107 aa1.24□□□□□ -2.21
SED5YLR026C ARL3Q02804 198 aa1.24□□□□□ -2.21
SED5YLR026C YHR073W-AP0C5N7 58 aa1.23□□□□□ -2.21
SED5YLR026C ZEO1Q08245 113 aa1.23□□□□□ -2.21
SED5YLR026C YLR361C-AQ3E795 98 aa1.21□□□□□ -2.22
SED5YLR026C NHP2P32495 156 aaPredicted RBP1.2□□□□□ -2.22
SED5YLR026C YHR130CP38834 111 aa1.2□□□□□ -2.22
SED5YLR026C RSM19P53733 91 aaPredicted RBP1.2□□□□□ -2.22
SED5YLR026C YKL044WP36092 106 aa1.19□□□□□ -2.22
SED5YLR026C YBR016WP38216 128 aa1.19□□□□□ -2.22
SED5YLR026C YPR153WQ06537 140 aa1.19□□□□□ -2.22
SED5YLR026C YOL013W-AP0C272 63 aaPredicted RBP1.18□□□□□ -2.22
SED5YLR026C EDC1P53080 175 aaPredicted RBP1.18□□□□□ -2.22
SED5YLR026C YJL133C-AQ3E7A3 74 aa1.18□□□□□ -2.22
SED5YLR026C MIC10Q96VH5 97 aa1.18□□□□□ -2.22
SED5YLR026C MRPL44P19956 98 aa1.17□□□□□ -2.22
SED5YLR026C SEN15Q04675 128 aa1.17□□□□□ -2.22
SED5YLR026C YML054C-AQ3E809 52 aa1.17□□□□□ -2.22
SED5YLR026C YHR213W-BQ8TGK1 99 aa1.17□□□□□ -2.22
SED5YLR026C YEL014CP39999 101 aa1.16□□□□□ -2.22
SED5YLR026C HUR1P45820 110 aa1.16□□□□□ -2.22
SED5YLR026C CNL1Q06333 122 aa1.16□□□□□ -2.22
SED5YLR026C COA6Q3E846 104 aa1.16□□□□□ -2.22
SED5YLR026C YAR064WP39563 99 aa1.15□□□□□ -2.23
SED5YLR026C YOR316C-AQ3E806 69 aa1.15□□□□□ -2.23
SED5YLR026C YGR164WP53291 111 aa1.14□□□□□ -2.23
SED5YLR026C MSL1P40567 111 aaPredicted RBP1.13□□□□□ -2.23
SED5YLR026C YJR107C-AP0CT86 78 aa1.12□□□□□ -2.23
SED5YLR026C TDA2P40045 126 aa1.12□□□□□ -2.23
SED5YLR026C GTT1P40582 234 aa1.12□□□□□ -2.23
SED5YLR026C ICS3P47034 131 aa1.12□□□□□ -2.23
SED5YLR026C ATP18P81450 59 aa1.12□□□□□ -2.23
SED5YLR026C YOR304C-AO14468 76 aa1.11□□□□□ -2.23
SED5YLR026C RPL36AP05745 100 aaPredicted RBP1.11□□□□□ -2.23
SED5YLR026C RPS28BP0C0X0 67 aaKnown RBP1.11□□□□□ -2.23
SED5YLR026C YFR009W-AP0C5M9 85 aa1.11□□□□□ -2.23
SED5YLR026C HHY1P39982 102 aa1.11□□□□□ -2.23
SED5YLR026C ELC1Q03071 99 aa1.11□□□□□ -2.23
SED5YLR026C RPS28AQ3E7X9 67 aaPredicted RBP1.11□□□□□ -2.23
SED5YLR026C COX23P38824 151 aa1.1□□□□□ -2.23
SED5YLR026C YIL102CP40488 101 aa1.1□□□□□ -2.23
SED5YLR026C SSS1P35179 80 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms