RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YOR032W-AQ8TGS1 66 aa1.14□□□□□ -2.23
EBP2YKL172W RIM15P43565 1770 aa1.13□□□□□ -2.23
EBP2YKL172W RRP5Q05022 1729 aaKnown RBP1.13□□□□□ -2.23
EBP2YKL172W YDR182W-AQ3E796 67 aa1.13□□□□□ -2.23
EBP2YKL172W YOL164W-AQ3E7A5 60 aa1.13□□□□□ -2.23
EBP2YKL172W YIL134C-AQ45U18 67 aa1.13□□□□□ -2.23
EBP2YKL172W PMD1P32634 1753 aa1.13□□□□□ -2.23
EBP2YKL172W DNF1P32660 1571 aa1.13□□□□□ -2.23
EBP2YKL172W YNL190WP53872 204 aa1.12□□□□□ -2.23
EBP2YKL172W TY1B-DR6P0C2I3 1755 aa1.11□□□□□ -2.23
EBP2YKL172W TY1B-LR2P0C2I5 1755 aa1.11□□□□□ -2.23
EBP2YKL172W TY1B-JR2P47100 1755 aaKnown RBP1.11□□□□□ -2.23
EBP2YKL172W TY1B-MR1Q04214 1755 aa1.11□□□□□ -2.23
EBP2YKL172W TY1B-MR2Q04670 1755 aaKnown RBP1.11□□□□□ -2.23
EBP2YKL172W TY1B-NL1Q12112 1755 aa1.11□□□□□ -2.23
EBP2YKL172W TY1B-GR1Q12141 1755 aa1.11□□□□□ -2.23
EBP2YKL172W TY1B-GR3Q12316 1755 aa1.11□□□□□ -2.23
EBP2YKL172W TY1B-PLQ12414 1755 aaKnown RBP1.11□□□□□ -2.23
EBP2YKL172W TY1B-ORQ92393 1755 aa1.11□□□□□ -2.23
EBP2YKL172W EDC1P53080 175 aaPredicted RBP1.11□□□□□ -2.23
EBP2YKL172W MMS1Q06211 1407 aa1.1□□□□□ -2.23
EBP2YKL172W YDR246W-AQ3E763 66 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-LR1P0C2J3 1770 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-FP0CX63 1770 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-GR2P0CX64 1770 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-DR2Q03494 1770 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-OR1Q12113 1770 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-BQ12491 1770 aa1.1□□□□□ -2.23
EBP2YKL172W TY2B-OR2Q12501 1770 aa1.1□□□□□ -2.23
EBP2YKL172W APC1P53886 1748 aa1.09□□□□□ -2.23
EBP2YKL172W TY2B-DR3Q07791 1770 aaKnown RBP1.09□□□□□ -2.23
EBP2YKL172W TY1B-DR5P0C2I2 1755 aa1.08□□□□□ -2.24
EBP2YKL172W TY1B-PR1P0C2I9 1755 aaKnown RBP1.08□□□□□ -2.24
EBP2YKL172W TY1B-JR1P47098 1755 aa1.08□□□□□ -2.24
EBP2YKL172W TY1B-ML2Q03434 1755 aaKnown RBP1.08□□□□□ -2.24
EBP2YKL172W TY1B-ER1Q03612 1755 aa1.08□□□□□ -2.24
EBP2YKL172W TY1B-ER2Q03619 1755 aa1.08□□□□□ -2.24
EBP2YKL172W TY1B-ML1Q04711 1755 aaKnown RBP1.08□□□□□ -2.24
EBP2YKL172W TY1B-LR1Q12088 1755 aaKnown RBP1.08□□□□□ -2.24
EBP2YKL172W TY1B-GR2Q12269 1755 aa1.08□□□□□ -2.24
EBP2YKL172W TY1B-OLQ12273 1755 aa1.08□□□□□ -2.24
EBP2YKL172W RPS30AP0CX33 63 aaKnown RBP1.08□□□□□ -2.24
EBP2YKL172W RPS30BP0CX34 63 aaKnown RBP1.08□□□□□ -2.24
EBP2YKL172W PDR5P33302 1511 aaKnown RBP1.07□□□□□ -2.24
EBP2YKL172W YBL039W-BP0C268 59 aa1.07□□□□□ -2.24
EBP2YKL172W DNF2Q12675 1612 aa1.07□□□□□ -2.24
EBP2YKL172W FKS3Q04952 1785 aa1.06□□□□□ -2.24
EBP2YKL172W PDR12Q02785 1511 aa1.06□□□□□ -2.24
EBP2YKL172W OLI1P61829 76 aa1.06□□□□□ -2.24
EBP2YKL172W YOR011W-AQ3E807 68 aa1.06□□□□□ -2.24
EBP2YKL172W YKL023C-AQ2V2P3 75 aa1.05□□□□□ -2.24
EBP2YKL172W YBR200W-AQ3E755 54 aa1.05□□□□□ -2.24
EBP2YKL172W ARO1P08566 1588 aaKnown RBP1.04□□□□□ -2.24
EBP2YKL172W BCK1Q01389 1478 aa1.04□□□□□ -2.24
EBP2YKL172W TY3B-GQ99315 1547 aa1.04□□□□□ -2.24
EBP2YKL172W HKR1P41809 1802 aa1.03□□□□□ -2.24
EBP2YKL172W YFR009W-AP0C5M9 85 aa1.03□□□□□ -2.24
EBP2YKL172W YOR394C-AQ8TGJ0 55 aa1.02□□□□□ -2.25
EBP2YKL172W YOL166W-AQ8TGJ1 51 aa1.02□□□□□ -2.25
EBP2YKL172W YMR001C-AQ8TGS9 76 aa1.02□□□□□ -2.25
EBP2YKL172W TY1B-DR4Q07793 1604 aa1.01□□□□□ -2.25
EBP2YKL172W KOG1P38873 1557 aa1.01□□□□□ -2.25
EBP2YKL172W YCF1P39109 1515 aaKnown RBP1.01□□□□□ -2.25
EBP2YKL172W MON2P48563 1636 aaPredicted RBP1□□□□□ -2.25
EBP2YKL172W SNQ2P32568 1501 aaKnown RBP1□□□□□ -2.25
EBP2YKL172W YBR016WP38216 128 aa1□□□□□ -2.25
EBP2YKL172W SPO14P36126 1683 aa1□□□□□ -2.25
EBP2YKL172W YLR157W-DP0CE99 70 aa0.99□□□□□ -2.25
EBP2YKL172W RPS29BP41058 56 aaKnown RBP0.99□□□□□ -2.25
EBP2YKL172W YGR025WP53216 100 aa0.99□□□□□ -2.25
EBP2YKL172W VTH1P40438 1549 aa0.99□□□□□ -2.25
EBP2YKL172W VTH2P40890 1549 aa0.99□□□□□ -2.25
EBP2YKL172W SPT6P23615 1451 aaKnown RBP0.99□□□□□ -2.25
EBP2YKL172W PRP8P33334 2413 aaKnown RBP0.98□□□□□ -2.25
EBP2YKL172W RPO21P04050 1733 aaKnown RBP0.98□□□□□ -2.25
EBP2YKL172W VMR1P38735 1592 aa0.97□□□□□ -2.25
EBP2YKL172W PDR15Q04182 1529 aaKnown RBP0.97□□□□□ -2.25
EBP2YKL172W SNF2P22082 1703 aa0.96□□□□□ -2.26
EBP2YKL172W RPS27AP35997 82 aaKnown RBP0.96□□□□□ -2.26
EBP2YKL172W YBR230W-AQ3E762 66 aa0.96□□□□□ -2.26
EBP2YKL172W CDC25P04821 1589 aa0.96□□□□□ -2.26
EBP2YKL172W IRC20Q06554 1556 aa0.96□□□□□ -2.26
EBP2YKL172W SIP18P50263 79 aa0.95□□□□□ -2.26
EBP2YKL172W YBL044WP38194 122 aa0.94□□□□□ -2.26
EBP2YKL172W SSK2P53599 1579 aa0.94□□□□□ -2.26
EBP2YKL172W YOR192C-CQ3E736 78 aa0.93□□□□□ -2.26
EBP2YKL172W YOR008C-AQ3E7B9 74 aa0.91□□□□□ -2.26
EBP2YKL172W YBT1P32386 1661 aa0.91□□□□□ -2.26
EBP2YKL172W HAP1P0CE41 1502 aa0.89□□□□□ -2.27
EBP2YKL172W SEN1Q00416 2231 aaKnown RBP0.89□□□□□ -2.27
EBP2YKL172W YOR093CQ12275 1648 aa0.88□□□□□ -2.27
EBP2YKL172W ULS1Q08562 1619 aa0.87□□□□□ -2.27
EBP2YKL172W PEP1P32319 1579 aa0.85□□□□□ -2.27
EBP2YKL172W USO1P25386 1790 aa0.85□□□□□ -2.27
EBP2YKL172W NUP188P52593 1655 aaKnown RBP0.84□□□□□ -2.27
EBP2YKL172W RPS27BP38711 82 aa0.84□□□□□ -2.27
EBP2YKL172W TOS6P48560 102 aa0.84□□□□□ -2.27
EBP2YKL172W YCR108CQ3E819 63 aa0.84□□□□□ -2.27
EBP2YKL172W YGR146C-AQ8TGT9 53 aa0.84□□□□□ -2.27
EBP2YKL172W COA2Q3E823 68 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms