RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W YPL261CQ08976 102 aa1.23□□□□□ -2.21
CAP1YKL007W YMR175W-AQ3E766 64 aa1.23□□□□□ -2.21
CAP1YKL007W UBC4P15731 148 aa1.22□□□□□ -2.21
CAP1YKL007W YER187WP40102 141 aa1.22□□□□□ -2.21
CAP1YKL007W YIR020CP40575 100 aa1.22□□□□□ -2.21
CAP1YKL007W YFR035CP43608 114 aa1.22□□□□□ -2.21
CAP1YKL007W SPG1P50088 95 aa1.22□□□□□ -2.21
CAP1YKL007W MGR2Q02889 113 aa1.22□□□□□ -2.21
CAP1YKL007W YDL241WQ07738 123 aa1.22□□□□□ -2.21
CAP1YKL007W YDR381C-AQ3E6R5 114 aa1.22□□□□□ -2.21
CAP1YKL007W RRT15Q3E811 62 aa1.22□□□□□ -2.21
CAP1YKL007W MIC10Q96VH5 97 aa1.22□□□□□ -2.21
CAP1YKL007W UTP20P35194 2493 aaKnown RBP1.22□□□□□ -2.21
CAP1YKL007W YCL042WP25572 119 aa1.21□□□□□ -2.22
CAP1YKL007W MRPL38P35996 138 aaPredicted RBP1.21□□□□□ -2.22
CAP1YKL007W GAT4P40569 121 aa1.21□□□□□ -2.22
CAP1YKL007W YLR342W-AQ3E810 57 aa1.21□□□□□ -2.22
CAP1YKL007W Q0297Q9ZZV8 51 aa1.21□□□□□ -2.22
CAP1YKL007W PFY1P07274 126 aa1.2□□□□□ -2.22
CAP1YKL007W YSY6P38374 65 aa1.2□□□□□ -2.22
CAP1YKL007W PAU7P39545 55 aa1.2□□□□□ -2.22
CAP1YKL007W RSM19P53733 91 aaPredicted RBP1.2□□□□□ -2.22
CAP1YKL007W AIM4P38305 123 aaPredicted RBP1.19□□□□□ -2.22
CAP1YKL007W YEL014CP39999 101 aa1.19□□□□□ -2.22
CAP1YKL007W POR2P40478 281 aa1.19□□□□□ -2.22
CAP1YKL007W AIM19P40502 157 aa1.19□□□□□ -2.22
CAP1YKL007W MRPS12P53732 153 aa1.19□□□□□ -2.22
CAP1YKL007W ICY1Q04329 127 aa1.19□□□□□ -2.22
CAP1YKL007W CCW12Q12127 133 aa1.19□□□□□ -2.22
CAP1YKL007W YBR200W-AQ3E755 54 aa1.19□□□□□ -2.22
CAP1YKL007W YDR246W-AQ3E763 66 aa1.19□□□□□ -2.22
CAP1YKL007W YOR376W-AQ3E805 51 aa1.19□□□□□ -2.22
CAP1YKL007W AQY2P0CD90 149 aa1.18□□□□□ -2.22
CAP1YKL007W YHR212W-AP0CX91 67 aa1.18□□□□□ -2.22
CAP1YKL007W HMRA2P0CY13 119 aa1.18□□□□□ -2.22
CAP1YKL007W MPC2P38857 129 aa1.18□□□□□ -2.22
CAP1YKL007W RSM18P40033 138 aa1.18□□□□□ -2.22
CAP1YKL007W DCV1P43595 202 aa1.18□□□□□ -2.22
CAP1YKL007W ICS3P47034 131 aa1.18□□□□□ -2.22
CAP1YKL007W TOS6P48560 102 aa1.18□□□□□ -2.22
CAP1YKL007W ERI1P62651 68 aaKnown RBP1.18□□□□□ -2.22
CAP1YKL007W YLR194CQ05777 254 aa1.18□□□□□ -2.22
CAP1YKL007W YPR153WQ06537 140 aa1.18□□□□□ -2.22
CAP1YKL007W YLR285C-AQ3E771 56 aa1.18□□□□□ -2.22
CAP1YKL007W RPL43AP0CX25 92 aaKnown RBP1.17□□□□□ -2.22
CAP1YKL007W RPL43BP0CX26 92 aa1.17□□□□□ -2.22
CAP1YKL007W HUR1P45820 110 aa1.17□□□□□ -2.22
CAP1YKL007W YNL190WP53872 204 aa1.17□□□□□ -2.22
CAP1YKL007W VAM10Q08474 114 aa1.17□□□□□ -2.22
CAP1YKL007W YOR011W-AQ3E807 68 aa1.17□□□□□ -2.22
CAP1YKL007W YAL065CO13511 128 aa1.16□□□□□ -2.22
CAP1YKL007W YAL064WP39711 94 aa1.16□□□□□ -2.22
CAP1YKL007W TDA2P40045 126 aa1.16□□□□□ -2.22
CAP1YKL007W RPL37AP49166 88 aaKnown RBP1.16□□□□□ -2.22
CAP1YKL007W EDC1P53080 175 aaPredicted RBP1.16□□□□□ -2.22
CAP1YKL007W HOR7Q05827 59 aa1.16□□□□□ -2.22
CAP1YKL007W YOR314WQ12506 109 aa1.16□□□□□ -2.22
CAP1YKL007W CMC4Q3E7A9 73 aa1.16□□□□□ -2.22
CAP1YKL007W CUP1-1P0CX80 61 aa1.15□□□□□ -2.23
CAP1YKL007W CUP1-2P0CX81 61 aa1.15□□□□□ -2.23
CAP1YKL007W YBR027CP38220 110 aa1.15□□□□□ -2.23
CAP1YKL007W SHU1P38751 150 aa1.15□□□□□ -2.23
CAP1YKL007W YHL005CP38752 130 aa1.15□□□□□ -2.23
CAP1YKL007W IRC21Q04772 201 aa1.15□□□□□ -2.23
CAP1YKL007W SOM1Q05676 74 aa1.15□□□□□ -2.23
CAP1YKL007W YOR008C-AQ3E7B9 74 aa1.15□□□□□ -2.23
CAP1YKL007W YGR121W-AQ3E816 71 aa1.15□□□□□ -2.23
CAP1YKL007W NOP10Q6Q547 58 aaPredicted RBP1.15□□□□□ -2.23
CAP1YKL007W CCW14O13547 238 aa1.14□□□□□ -2.23
CAP1YKL007W YER188C-AP0C0V2 99 aa1.14□□□□□ -2.23
CAP1YKL007W FYV5P25585 152 aa1.14□□□□□ -2.23
CAP1YKL007W YMR122CQ03879 124 aa1.14□□□□□ -2.23
CAP1YKL007W YOR034C-AQ3E735 80 aa1.14□□□□□ -2.23
CAP1YKL007W YDR182W-AQ3E796 67 aa1.14□□□□□ -2.23
CAP1YKL007W YGR035W-AQ45U48 73 aa1.14□□□□□ -2.23
CAP1YKL007W OST5Q92316 86 aa1.14□□□□□ -2.23
CAP1YKL007W RPL36BO14455 100 aaKnown RBP1.13□□□□□ -2.23
CAP1YKL007W RPL36AP05745 100 aaPredicted RBP1.13□□□□□ -2.23
CAP1YKL007W YJR107C-AP0CT86 78 aa1.13□□□□□ -2.23
CAP1YKL007W RPS30AP0CX33 63 aaKnown RBP1.13□□□□□ -2.23
CAP1YKL007W RPS30BP0CX34 63 aaKnown RBP1.13□□□□□ -2.23
CAP1YKL007W YAR064WP39563 99 aa1.13□□□□□ -2.23
CAP1YKL007W YIL102CP40488 101 aa1.13□□□□□ -2.23
CAP1YKL007W RPL38P49167 78 aaKnown RBP1.13□□□□□ -2.23
CAP1YKL007W YKL065W-AQ2V2P2 73 aa1.13□□□□□ -2.23
CAP1YKL007W YOL166W-AQ8TGJ1 51 aa1.13□□□□□ -2.23
CAP1YKL007W RPS11AP0CX47 156 aaKnown RBP1.12□□□□□ -2.23
CAP1YKL007W RPS11BP0CX48 156 aaKnown RBP1.12□□□□□ -2.23
CAP1YKL007W AUA1P32450 94 aa1.12□□□□□ -2.23
CAP1YKL007W QCR10P37299 77 aa1.12□□□□□ -2.23
CAP1YKL007W RPL33AP05744 107 aaKnown RBP1.11□□□□□ -2.23
CAP1YKL007W YCR001WP25347 104 aa1.11□□□□□ -2.23
CAP1YKL007W YGL149WP53116 101 aa1.11□□□□□ -2.23
CAP1YKL007W ATP18P81450 59 aa1.11□□□□□ -2.23
CAP1YKL007W YLL066W-BQ8TGJ7 56 aa1.11□□□□□ -2.23
CAP1YKL007W SPC1P46965 94 aa1.1□□□□□ -2.23
CAP1YKL007W LCL2Q08045 131 aa1.1□□□□□ -2.23
CAP1YKL007W YOR072WQ08486 104 aa1.1□□□□□ -2.23
CAP1YKL007W YIL156W-BQ2V2P4 73 aa1.1□□□□□ -2.23
CAP1YKL007W YLL006W-AQ3E814 58 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms