RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YMR321CQ04898 105 aa1.15□□□□□ -2.23
VPS35YJL154C YAL065CO13511 128 aa1.14□□□□□ -2.23
VPS35YJL154C YGL014C-AP0C5N1 53 aa1.14□□□□□ -2.23
VPS35YJL154C PAU8P0CE92 120 aa1.14□□□□□ -2.23
VPS35YJL154C PAU11P0CE93 120 aa1.14□□□□□ -2.23
VPS35YJL154C PAU13P38725 120 aa1.14□□□□□ -2.23
VPS35YJL154C YHR173CP38864 112 aa1.14□□□□□ -2.23
VPS35YJL154C SMX2P40204 77 aaKnown RBP1.14□□□□□ -2.23
VPS35YJL154C PAU4P53427 120 aa1.14□□□□□ -2.23
VPS35YJL154C PAU10Q03050 120 aa1.14□□□□□ -2.23
VPS35YJL154C IRC21Q04772 201 aa1.14□□□□□ -2.23
VPS35YJL154C COX19Q3E731 98 aa1.14□□□□□ -2.23
VPS35YJL154C PAU9Q3E770 120 aa1.14□□□□□ -2.23
VPS35YJL154C PAU1P0CE88 120 aa1.14□□□□□ -2.23
VPS35YJL154C PAU14P0CE89 120 aa1.14□□□□□ -2.23
VPS35YJL154C QCR9P22289 66 aa1.14□□□□□ -2.23
VPS35YJL154C YHL037CP38733 133 aa1.14□□□□□ -2.23
VPS35YJL154C YMR122CQ03879 124 aa1.14□□□□□ -2.23
VPS35YJL154C YKL065W-AQ2V2P2 73 aa1.14□□□□□ -2.23
VPS35YJL154C YGR121W-AQ3E816 71 aa1.14□□□□□ -2.23
VPS35YJL154C YIL163CP40448 117 aa1.13□□□□□ -2.23
VPS35YJL154C YLR162WQ06235 118 aa1.13□□□□□ -2.23
VPS35YJL154C YSY6P38374 65 aa1.13□□□□□ -2.23
VPS35YJL154C MRX7P53869 86 aa1.13□□□□□ -2.23
VPS35YJL154C ERI1P62651 68 aaKnown RBP1.13□□□□□ -2.23
VPS35YJL154C YDR010CQ12426 110 aa1.13□□□□□ -2.23
VPS35YJL154C PAU20Q08322 120 aa1.12□□□□□ -2.23
VPS35YJL154C YIL156W-BQ2V2P4 73 aa1.12□□□□□ -2.23
VPS35YJL154C YCL048W-AQ2V2Q2 79 aa1.12□□□□□ -2.23
VPS35YJL154C TAR1Q8TGM6 124 aa1.12□□□□□ -2.23
VPS35YJL154C YHR007C-AQ07074 71 aa1.12□□□□□ -2.23
VPS35YJL154C CDC39P25655 2108 aaKnown RBP1.12□□□□□ -2.23
VPS35YJL154C YSF3P0C074 85 aaPredicted RBP1.11□□□□□ -2.23
VPS35YJL154C BSC4P53841 131 aa1.11□□□□□ -2.23
VPS35YJL154C YGR035W-AQ45U48 73 aa1.11□□□□□ -2.23
VPS35YJL154C NOP10Q6Q547 58 aaPredicted RBP1.11□□□□□ -2.23
VPS35YJL154C CCW14O13547 238 aa1.11□□□□□ -2.23
VPS35YJL154C RPL33AP05744 107 aaKnown RBP1.11□□□□□ -2.23
VPS35YJL154C YDR246W-AQ3E763 66 aa1.11□□□□□ -2.23
VPS35YJL154C SPI1P40092 148 aa1.11□□□□□ -2.23
VPS35YJL154C LCL2Q08045 131 aa1.1□□□□□ -2.23
VPS35YJL154C VAM10Q08474 114 aa1.1□□□□□ -2.23
VPS35YJL154C CCW12Q12127 133 aa1.1□□□□□ -2.23
VPS35YJL154C YKL023C-AQ2V2P3 75 aa1.1□□□□□ -2.23
VPS35YJL154C YKL018C-AQ3E7A7 99 aa1.1□□□□□ -2.23
VPS35YJL154C PAU7P39545 55 aa1.1□□□□□ -2.23
VPS35YJL154C YEL008WP40001 126 aa1.1□□□□□ -2.23
VPS35YJL154C MRPS12P53732 153 aa1.1□□□□□ -2.23
VPS35YJL154C BPH1P25356 2167 aa1.09□□□□□ -2.23
VPS35YJL154C YDR210WQ03482 75 aa1.09□□□□□ -2.23
VPS35YJL154C YOR032W-AQ8TGS1 66 aa1.09□□□□□ -2.23
VPS35YJL154C YDL022C-AP0C5L6 82 aa1.09□□□□□ -2.24
VPS35YJL154C RPS11AP0CX47 156 aaKnown RBP1.09□□□□□ -2.24
VPS35YJL154C RPS11BP0CX48 156 aaKnown RBP1.09□□□□□ -2.24
VPS35YJL154C AIM19P40502 157 aa1.09□□□□□ -2.24
VPS35YJL154C YGL041C-BQ3E750 60 aa1.08□□□□□ -2.24
VPS35YJL154C CYR1P08678 2026 aaKnown RBP1.08□□□□□ -2.24
VPS35YJL154C YOR034C-AQ3E735 80 aa1.07□□□□□ -2.24
VPS35YJL154C YOR192C-CQ3E736 78 aa1.07□□□□□ -2.24
VPS35YJL154C YNL042W-BQ3E7Z2 85 aa1.07□□□□□ -2.24
VPS35YJL154C STT4P37297 1900 aa1.07□□□□□ -2.24
VPS35YJL154C YLR255CO13574 117 aa1.07□□□□□ -2.24
VPS35YJL154C EDC1P53080 175 aaPredicted RBP1.07□□□□□ -2.24
VPS35YJL154C YNL190WP53872 204 aa1.07□□□□□ -2.24
VPS35YJL154C COA3Q3E7B2 85 aa1.07□□□□□ -2.24
VPS35YJL154C RPS30AP0CX33 63 aaKnown RBP1.07□□□□□ -2.24
VPS35YJL154C RPS30BP0CX34 63 aaKnown RBP1.07□□□□□ -2.24
VPS35YJL154C YNL146C-AQ3E7Z1 64 aa1.06□□□□□ -2.24
VPS35YJL154C AQY2P0CD90 149 aa1.06□□□□□ -2.24
VPS35YJL154C YGR240C-AQ3E786 66 aa1.06□□□□□ -2.24
VPS35YJL154C YDR182W-AQ3E796 67 aa1.06□□□□□ -2.24
VPS35YJL154C SLH1P53327 1967 aaKnown RBP1.05□□□□□ -2.24
VPS35YJL154C MGR2Q02889 113 aa1.05□□□□□ -2.24
VPS35YJL154C SGF11Q03067 99 aa1.05□□□□□ -2.24
VPS35YJL154C YMR122W-AQ3E842 84 aa1.05□□□□□ -2.24
VPS35YJL154C YBR032WP38223 100 aa1.04□□□□□ -2.24
VPS35YJL154C YBR201C-AQ2V2Q3 67 aa1.04□□□□□ -2.24
VPS35YJL154C YCR001WP25347 104 aa1.04□□□□□ -2.24
VPS35YJL154C ATP17Q06405 101 aa1.04□□□□□ -2.24
VPS35YJL154C YOL166W-AQ8TGJ1 51 aa1.04□□□□□ -2.24
VPS35YJL154C LCL1Q02786 101 aa1.03□□□□□ -2.24
VPS35YJL154C YNL122CP53921 115 aaPredicted RBP1.03□□□□□ -2.24
VPS35YJL154C MVB12P42939 101 aa1.02□□□□□ -2.25
VPS35YJL154C YMR007WQ03675 126 aa1.02□□□□□ -2.25
VPS35YJL154C HUB1Q6Q546 73 aa1.02□□□□□ -2.25
VPS35YJL154C Q0032Q9ZZX7 96 aa1.02□□□□□ -2.25
VPS35YJL154C SHU1P38751 150 aa1.02□□□□□ -2.25
VPS35YJL154C YIL086CP40503 102 aa1.02□□□□□ -2.25
VPS35YJL154C ATP18P81450 59 aa1.02□□□□□ -2.25
VPS35YJL154C SDH6Q3E785 79 aa1.01□□□□□ -2.25
VPS35YJL154C YJL009WP47078 108 aa1.01□□□□□ -2.25
VPS35YJL154C YLR146W-AQ2V2P1 62 aa1.01□□□□□ -2.25
VPS35YJL154C YJR107C-AP0CT86 78 aa0.99□□□□□ -2.25
VPS35YJL154C YOL097W-AQ3E7Y9 61 aa0.99□□□□□ -2.25
VPS35YJL154C YMR001C-AQ8TGS9 76 aa0.99□□□□□ -2.25
VPS35YJL154C YLR157W-DP0CE99 70 aa0.98□□□□□ -2.25
VPS35YJL154C YOR072WQ08486 104 aa0.98□□□□□ -2.25
VPS35YJL154C HUG1Q6Q5K6 68 aa0.98□□□□□ -2.25
VPS35YJL154C BLM10P43583 2143 aa0.98□□□□□ -2.25
VPS35YJL154C YPR108W-AQ3E7B3 70 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms